Abstract

Of the isoforms of plant phospholipase D (PLD) that have been cloned and characterized, PLDalpha requires millimolar levels of Ca(2+) for optimal activity, whereas PLDbeta is most active at micromolar concentrations of Ca(2+). Multiple amino acid sequence alignments suggest that PLDalpha and PLDbeta both contain a Ca(2+)-dependent phospholipid-binding C2 domain near their N termini. In the present study, we expressed and characterized the putative C2 domains of PLDalpha and PLDbeta, designated PLDalpha C2 and PLDbeta C2, by CD spectroscopy, isothermal titration calorimetry, and phospholipid binding assay. Both PLD C2 domains displayed CD spectra consistent with anticipated major beta-sheet structures but underwent spectral changes upon binding Ca(2+); the magnitude was larger for PLDbeta C2. These conformational changes, not shown by any of the previously characterized C2 domains of animal origin, occurred at micromolar Ca(2+) concentrations for PLDbeta C2 but at millimolar levels of the cation for PLDalpha C2. PLDbeta C2 exhibited three Ca(2+)-binding sites: one with a dissociation constant (K(d)) of 0.8 microm and the other two with a K(d) of 24 micrometer. In contrast, isothermal titration calorimetry data of PLDalpha C2 were consistent with 1-3 low affinity Ca(2+)-binding sites with K(d) in the range of 590-470 micrometer. The thermodynamics of Ca(2+) binding markedly differed for the two C2 domains. Likewise, PLDbeta C2 bound phosphatidylcholine (PC), the substrate of PLD, in the presence of submillimolar Ca(2+) concentrations, whereas PLDalpha C2 did so only in the presence of millimolar levels of the metal ion. Both C2 domains bound phosphatidylinoistol 4,5-bisphosphate, a regulator of PC hydrolysis by PLD. However, added Ca(2+) displaced the bound phosphatidylinoistol 4,5-bisphosphate. Ca(2+) and PC binding properties of PLDalpha C2 and PLDbeta C2 follow a trend similar to the Ca(2+) requirements of the whole enzymes, PLDalpha and PLDbeta, for PC hydrolysis. Taken together, the results suggest that the C2 domains of PLDalpha and PLDbeta have novel structural features and serve as handles by which Ca(2+) differentially regulates the activities of the isoforms.

Highlights

  • Phospholipase D (PLD)1 (EC 3.1.4.4) catalyzes the hydrolysis of phospholipids at the terminal phospohodiester bond, producing a free head group and phosphatidic acid

  • A dominant ␤-sheet structure of phospholipase D (PLD)␤ C2⌬173–190 was indicated by CD spectroscopy [31], suggesting that it was correctly refolded (Fig. 3)

  • The present study has provided the first evidence that the putative C2 domain of plant PLD is an independent Ca2ϩ-binding unit

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Summary

EXPERIMENTAL PROCEDURES

Construction of PLD␣ C2 and PLD␤ C2 Expression Plasmids—The putative C2 domain of Arabidopsis PLD␣ corresponds to the amino acid sequence 8 –151. The protein solution was dialyzed against 50 mM Tris-HCl, pH 8.4, overnight at 4 °C and concentrated by means of a negative pressure dialysis system (Spectrum) To remove the His tag, the solubilized protein was incubated with highly pure thrombin at a ratio of 1 unit of thrombin to 1 mg of fusion protein at room temperature for 8 h. GST fusion proteins bound to glutathione-agarose beads were suspended in 9 volumes of a binding buffer containing 50 mM Tris-HCl, 200 mM NaCl, and the various concentrations of Ca2ϩ to be tested. A similar procedure was followed to determine phosphatidylinoistol 4,5-bisphosphate (PIP2) binding by PLD C2 domains as a function of Ca2ϩ concentration, using lipid vesicles made up of 400 ␮g of PIP2 mixed with 0.4 ␮Ci of 3H-labeled PIP2 (dipalmitoyl-glycero-3-P[inositol-2-3H]inositol 4,5-bisphosphate, DuPont)

RESULTS
DISCUSSION
According to the model based on NMR studies of snaptotagmin
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