Abstract

Understanding gene function (GF) is still a significant challenge in system biology. Previously, several machine learning and computational techniques have been used to understand GF. However, these previous attempts have not produced a comprehensive interpretation of the relationship between genes and differences in both age and gender. Although there are several thousands of genes, very few differentially expressed genes play an active role in understanding the age and gender differences. The core aim of this study is to uncover new biomarkers that can contribute towards distinguishing between male and female according to the gene expression levels of skeletal muscle (SM) tissues. In our proposed multi-filter system (MFS), genes are first sorted using three different ranking techniques (t-test, Wilcoxon and Receiver Operating Characteristic (ROC)). Later, important genes are acquired using majority voting based on the principle that combining multiple models can improve the generalization of the system. Experiments were conducted on Micro Array gene expression dataset and results have indicated a significant increase in classification accuracy when compared with existing system.

Highlights

  • Sexual dimorphism of skeletal muscle can occur due to age [1] and many of these age-related changes in skeletal muscle appear to be influenced by gender [2], [17], [18]

  • We will evaluate the performance of the multi-filter system (MFS)

  • The proposed system is compared with the system presented in [2] and[19], in which genes are identified for three categories from total of 54623 genes

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Summary

Introduction

Sexual dimorphism of skeletal muscle can occur due to age [1] and many of these age-related changes in skeletal muscle appear to be influenced by gender [2], [17], [18]. The muscle mass of men is larger than that of women, especially for type II fibers, while the type I muscle fibers proportion of oxidative is higher in women [3]. Welle et al reported that the muscle mass of men is larger than that of women [1], [11], [12], due to the higher level of testosterone and the anabolic effect of testosterone is well known. There are several changes in skeletal muscle related to age that seem to be influenced by gender [4]. These changes in gene expression could be responsible for the decline in muscle function [5]. For the profiles of men and women, there are few comparisons of broad gene expression that have been carried out [5]

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