Abstract

Muscle-specific isoform of the mitochondrial ATP synthase gamma subunit (F(1)gamma) was generated by alternative splicing, and exon 9 of the gene was found to be lacking particularly in skeletal muscle and heart tissue. Recently, we reported that alternative splicing of exon 9 was induced by low serum or acidic media in mouse myoblasts, and that this splicing required de novo protein synthesis of a negative regulatory factor (Ichida, M., Endo, H., Ikeda, U., Matsuda, C., Ueno, E., Shimada, K., and Kagawa, Y. (1998) J. Biol. Chem. 273, 8492-8501; Hayakawa, M., Endo, H., Hamamoto, T., and Kagawa, Y. (1998) Biochem. Biophys. Res. Commun. 251, 603-608). In the present report, we identified a cis-acting element on the muscle-specific alternatively spliced exon of F(1)gamma gene by an in vivo splicing system using cultured cells and transgenic mice. We constructed a F(1)gamma wild-type minigene, containing the full-length gene from exon 8 to exon 10, and two mutants; one mutant involved a pyrimidine-rich substitution on exon 9, whereas the other was a purine-rich substitution, abbreviated as F(1)gamma Pu-del and F(1)gamma Pu-rich mutants, respectively. Based on an in vivo splicing assay using low serum- or acid-stimulated splicing induction system in mouse myoblasts, Pu-del mutation inhibited exon inclusion, indicating that a Pu-del mutation would disrupt an exonic splicing enhancer. On the other hand, the Pu-rich mutation blocked muscle-specific exon exclusion following both inductions. Next, we produced transgenic mice bearing both mutant minigenes and analyzed their splicing patterns in tissues. Based on an analysis of F(1)gamma Pu-del minigene transgenic mice, the purine nucleotide of this element was shown to be necessary for exon inclusion in non-muscle tissue. In contrast, analysis of F(1)gamma Pu-rich minigene mice revealed that the F(1)gamma Pu-rich mutant exon had been excluded from heart and skeletal muscle of these transgenic mice, despite the fact mutation of the exon inhibited muscle-specific exon exclusion in myotubes of early embryonic stage. These results suggested that the splicing regulatory mechanism underlying F(1)gamma pre-mRNA differed between myotubes and myofibers during myogenesis and cardiogenesis.

Highlights

  • Alternative pre-mRNA splicing is a fundamental process in eukaryotes that contributes to tissue-specific and developmentally regulated patterns of gene expression at the posttranscriptional level

  • F1␥ pre-mRNA in C2C12 mouse myoblasts is induced in two different ways; one is replacement from growth medium to exonic splicing enhancer (ESE) for Muscle-specific RNA Splicing during Myogenesis differentiation medium, and the other is replacement to acidic medium [23]

  • (b and c), muscle-specific exclusion of exon 9 in both endogenous F1␥ pre-mRNA and exogenous pcDEBSR␣-F1␥ wild-type minigene pre-mRNA was observed after induction by differentiation medium or acidic medium. This minigene contains all genomic sequences from exon 8 to exon 10 of mouse F1␥ gene, and the spliced transcripts of the minigene was independently regulated by both induction systems in a similar manner as endogenous induction. These results indicated that the F1␥ wild-type minigene contained all cis-acting regulatory elements involved in muscle-specific alternative splicing

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Summary

Introduction

Alternative pre-mRNA splicing is a fundamental process in eukaryotes that contributes to tissue-specific and developmentally regulated patterns of gene expression at the posttranscriptional level. Both cis-acting elements and transacting factors have been reported to varying degrees [1,2,3]. Exonic and intronic cis-acting regulatory elements for RNA splicing have been reported in a number of mammalian genes located near weak 5Ј and 3Ј splice sites, and these elements appear to be involved in the control of stage- or tissue-specific splicing events (5, 8 –13). We found evidence using an in vitro splicing system that a negative regulatory factor for muscle-specific exon exclusion of human F1␥ pre-mRNA existed in nuclear extracts from acid-stimulated human fibrosarcoma cells [25]. We were unable to determine the exact regulatory mechanism underlying muscle-specific alternative splicing in muscle tissue

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