Abstract

The Tetrahymena thermophila DNA replication machinery faces unique demands due to the compartmentalization of two functionally distinct nuclei within a single cytoplasm, and complex developmental program. Here we present evidence for programmed changes in ORC and MCM abundance that are not consistent with conventional models for DNA replication. As a starting point, we show that ORC dosage is critical during the vegetative cell cycle and development. A moderate reduction in Orc1p induces genome instability in the diploid micronucleus, aberrant division of the polyploid macronucleus, and failure to generate a robust intra-S phase checkpoint response. In contrast to yeast ORC2 mutants, replication initiation is unaffected; instead, replication forks elongation is perturbed, as Mcm6p levels decline in parallel with Orc1p. Experimentally induced down-regulation of ORC and MCMs also impairs endoreplication and gene amplification, consistent with essential roles during development. Unexpectedly Orc1p and Mcm6p levels fluctuate dramatically in developing wild type conjugants, increasing for early cycles of conventional micronuclear DNA replication and macronuclear anlagen replication (endoreplication phase I, rDNA gene amplification). This increase does not reflect the DNA replication load, as much less DNA is synthesized during this developmental window compared to vegetative S phase. Furthermore, although Orc1p levels transiently increase prior to endoreplication phase II, Orc1p and Mcm6p levels decline when the replication load increases and unconventional DNA replication intermediates are produced. We propose that replication initiation is re-programmed to meet different requirements or challenges during the successive stages of Tetrahymena development.

Highlights

  • DNA replication initiates at specific sites in chromosomes, termed origins of replication

  • Pre-replicative complex assembly is mediated by transient interactions between Origin Recognition Complex (ORC), Cdc6 and Cdt1, which recruit the MCM2-7 complex- the replicative helicase that unwinds the DNA at replication origins and elongating replication forks

  • The Origin Recognition Complex is required for sitespecific replication initiation in eukaryotic chromosomes

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Summary

Introduction

DNA replication initiates at specific sites in chromosomes, termed origins of replication. While the genomic architecture of replication initiation sites varies widely across the eukaryotic lineage, a conserved feature is their association with the six-subunit Origin Recognition Complex (ORC) [1,2]. ORC-dependent licensing is required for replication initiation and provides a mechanism to prevent re-replication of chromosomes during S phase. Pre-replicative complex (pre-RC) assembly is mediated by transient interactions between ORC, Cdc and Cdt, which recruit the MCM2-7 complex- the replicative helicase that unwinds the DNA at replication origins and elongating replication forks. Additional factors (Cdc, GINS) recruit the DNA polymerase machinery to generate pre-initiation complexes. Phosphorylation and/or degradation of Orc1p prevents new pre-RCs from forming on daughter chromosomes [3]

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