Abstract

Background: Early detection and accurate identification of foodborne pathogen outbreaks is an important public health function. Increased clinical adoption of multiplex PCR assays or culture independent diagnostic tests (CIDT) correlates to more stool specimens sent to public health laboratories (PHL) for characterization. Isolation and confirmation of enteric bacterial pathogens can prove difficult to consistently recover. The purpose of this study was to evaluate the performance of a broad-use laboratory developed enrichment broth for isolation of Campylobacter, Salmonella, Shigella, and Yersinia strains from stool specimens. Methods: The study compared differences in positivity rates among media and enrichment combinations at specific time points. Comparison of direct inoculation (DI), enrichment using a lab-developed Enteric Bacterial Enrichment (EBE) broth and gold-standard isolation methods were conducted to test current utility of this established practice with stool specimens heat injured and non-injured. Results: A total of 234 spiked stool samples, 175 non-injured and 59 heat injured, were tested with varying bacterial concentrations. For non-injured stools, direct inoculation performed better for Campylobacter and Yersinia than enrichment. Conversely, Salmonella and Shigella recovery and limit of detection increased with enrichment. Campylobacter had the highest percent recovery while Shigella being the lowest from direct plating at 6-hour and 24-hour enrichment periods. Among broths, EBE performed the best for Yersinia and similar to Selenite broth for Salmonella and Shigella. Generally, heat injured stool had a significantly lower percent of recovery than non-heat injured with a higher limit of detection across organisms. Conclusion: Our data suggest there is an only utility for targeted enrichment of CIDT positive Salmonella stool specimens. We highlight the difficulties of formulating an enrichment broth capable of supporting a variety of enteric pathogens with standardized incubation. Increasing demands on PHL infrastructure warrant further examination of enhancing organism isolation and cost analyses for CIDT positive specimens.

Highlights

  • Gastroenteritis is a major cause of morbidity worldwide, and clinical presentation alone is unable to distinguish organism etiologies

  • Due to higher prevalence of clinical isolates seen at Tripler Army Medical Center (TAMC) more stools were spiked with Campylobacter (n = 98) than any other organism followed by Salmonella (n = 43), Shigella (n = 18) and Yersinia

  • Bacterial recovery was compared for direct inoculation and after enrichment of stools, in terms of dilutions, media and broth types

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Summary

Introduction

Gastroenteritis is a major cause of morbidity worldwide, and clinical presentation alone is unable to distinguish organism etiologies. Stool culture was the main diagnostic method in clinical microbiology and public health laboratories (PHL) for the identification of GI bacterial pathogens. In recent years, multiplex molecular assays have been developed and widely implemented for the detection of GI pathogens directly from clinical stool specimens [1] [2]. These multiplex panels are rapid and sensitive assays multiple organism detections can cloud interpretation [3]. As more laboratories adopt multiplex assays or culture independent diagnostic tests (CIDT), positive stool specimens will be sent to PHL instead of isolates. Increased clinical adoption of multiplex PCR assays or culture independent diagnostic tests (CIDT) correlates to more stool specimens sent to public health laboratories (PHL) for characterization. Comparison of direct inoculation (DI), enrichment using a lab-developed

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