DELE1 oligomers revealed by cryo-EM structure promote the integrated stress response activation.

Abstract

Mitochondria are dynamic organelles that must continually adapt and respond to cellular stress, and perturbations in mitochondrial function trigger the integrated stress response (ISR). Recent studies demonstrated that mitochondrial stress can be relayed from the mitochondrial interior to the cytosol by the release of a C-terminal proteolytic fragment of DELE1 that binds to the HRI kinase to initiate integrate stress response signaling. Here, we report the cryo-electron microscopy structure of the active, C-terminal cleavage product of human DELE1 at ∼3.8 Å resolution, revealing that DELE1 assembles into a high-order oligomer. We confirmed that this C-terminal fragment of DELE1 also assembles into large oligomers in cells. Structurally, the oligomer consists of eight DELE1 monomers that assemble with D4 symmetry via two sets of distinct hydrophobic inter-subunit interactions. We identified the key residues involved in DELE1 oligomerization and confirmed their role in stabilizing the octamer in vitro and in cells using mutagenesis. Further, we show that assembly-impaired DELE1 mutants are compromised in their ability to induce ISR activation in cell culture models. Together, our findings provide molecular insights into the activity of DELE1 and how it signals to promote ISR activity following mitochondrial insult.