Critical Studies on Lesion Segmentation in Medical Images
In medical images, lesion segmentation is used to locate and isolate abnormal structures. It is an essential part of medical image analysis for precise diagnosis and care. However, obstacles exist in medical image lesion segmentation owing to things like image noise, shape and size fluctuation, and poor image quality. Automated lesion segmentation methods include conventional image processing techniques, deep learning (DL) models and machine learning (ML) algorithms to name a few. Thresholding, region growth, and active contour models are examples of conventional methods, while decision trees, random forests, and support vector machines are examples of ML techniques. DL models particularly convolutional neural networks (CNNs), have shown extraordinary performance in lesion segmentation because to their innate potential to autonomously collect high-level characteristics. The objective of the research is to study lesion segmentation in medical images and explore different methods for accurate and precise diagnosis and care.The research focuses on the obstacles faced in lesion segmentation in medical images, such as image noise, shape and size fluctuation, and poor image quality. The research also highlights the need for evaluation metrics, such as sensitivity, specificity, Dice coefficient, and Hausdorff distance, to assess the performance of lesion segmentation algorithms. Additionally, the research emphasizes the importance of annotated datasets for training and evaluating the performance of segmentation algorithms.
- Research Article
2
- 10.35629/5252-0612125135
- Dec 1, 2024
- International Journal of Advances in Engineering and Management
The rapid advancements in medical imaging technologies have significantly enhanced diagnostic accuracy and clinical decision-making in modern healthcare. Image segmentation and deep learning have emerged as transformative tools among these advancements. This article explores the pivotal role of image segmentation and deep learning in medical imaging, detailing their methodologies, applications, challenges, and future directions. Deep learning, particularly Convolutional Neural Networks (CNNs), has revolutionized medical imaging by automating the analysis of complex datasets and improving diagnostic precision. Image segmentation, a fundamental component of medical imaging, allows for delineating specific structures such as organs, tissues, and pathological regions. Together, these technologies have been applied in diverse fields, including oncology, cardiology, neurology, and ophthalmology, enabling applications such as tumor detection, organ segmentation, disease progression monitoring, and treatment planning. However, despite its transformative potential, the integration of deep learning into medical imaging faces several challenges. These include data scarcity, privacy concerns, interpretability issues, and regulatory hurdles. The article discusses various strategies to address these challenges, such as data augmentation, transfer learning, and the development of explainable AI models to ensure transparency and trustworthiness. Evaluation metrics, such as accuracy, sensitivity, specificity, and Dice Similarity Coefficient (DSC), are essential for assessing model performance. Rigorous clinical validation and regulatory approval are crucial to integrating deep learning systems into clinical workflows effectively. Looking ahead, the future of deep learning in medical imaging holds immense promise. Innovations like multimodal imaging, personalized medicine, and AI-driven automation are set to further revolutionize the field, enhancing the efficiency and accuracy of diagnostics. Collaborative efforts between clinicians, researchers, and AI developers will play a vital role in overcoming current limitations and driving progress. This article concludes by emphasizing the transformative potential of deep learning and image segmentation in medical imaging, highlighting their ability to improve diagnostic accuracy, streamline clinical workflows, and ultimately, enhance patient care. By addressing current challenges and continuing to innovate, these technologies are poised to redefine the landscape of medical diagnostics and treatment in the years to come.
- Research Article
- 10.54216/ijbes.090202
- Jan 1, 2024
- International Journal of BIM and Engineering Science
Automated feature extraction and segmentation of medical images are essential for accurate diagnostics, enabling the identification of relevant structures with minimal human intervention. This study introduces an Explainable AI (XAI) framework for automated feature extraction in medical image segmentation, aiming to enhance transparency in deep learning models used in medical imaging. The proposed framework uses a Convolutional Neural Network (CNN) with integrated attention mechanisms and layer-wise relevance propagation (LRP) to identify critical features while segmenting regions of interest. Testing on datasets of MRI brain scans and CT liver scans, the model achieved an accuracy of 94%, a Dice similarity coefficient (DSC) of 0.88, and an Intersection over Union (IoU) score of 0.83. These results outperform conventional CNN-based segmentation techniques by 10% on average, highlighting the framework's precision in identifying and segmenting intricate structures, including lesions and abnormalities. Additionally, the XAI components provide visual explanations of the segmentation process, enabling clinicians to understand which features influenced the model's decisions. This enhanced transparency is crucial for building trust in AI-driven medical solutions, ultimately facilitating their integration into clinical workflows.
- Book Chapter
- 10.1515/9783110756722-012
- Feb 6, 2023
Need for medical imaging has immensely increased to diagnose functionality of organs and tissues. Application of magnetic resonance imaging (MRI) or computerized tomography scan (CT scan) has automated the process of disease prediction which otherwise would need manual intervention of experienced physicians. Critical transplants and tumor diagnosis of kidney, heart and liver could be very challenging without the application of high-resolution medical imaging. Semantic image segmentation helps to identify features within the image and label them to demarcate the background from organs and tumors formed on them. Current proposed model is built by applying image segmentation using deep learning models by training 3D image information obtained from KITS-19 using CNN U-Net architecture to segregate essential tumor details from the kidney background images. Considering the evaluation of medical condition based on imagery is very challenging due to lack of pre-processing methods to handle unbalanced nature of class distribution which is common in medical imaging. In the current research, we apply state-of-the-art convolution neural network and deep learning models to predict the tumor in MRI imagery. We performed evaluation of a subset of 60 CT scans with slice thickness values obtained from KiTS19 dataset. We also compared the image segmentation model with BRATS’2013 challenging dataset also to validate the prediction of tumor in brain MRI scan images. Performance evaluation of kidney and tumor features obtained through threefold cross validation comparing with ground truth gave us dice coefficient score of 0.96 while tumor segmentation prediction was close to 0.80. We believe the performance can be increased through higher GPU memory requirements, which was a limitation to our existing GPU hardware. Nevertheless, the possibility of applying improved deep learning model based on existing results and can be a promising step forward in medical imaging segmentation.
- Research Article
7
- 10.1109/access.2019.2950960
- Jan 1, 2019
- IEEE Access
Deep learning has achieved great success in the field of computer vision, and the precision in image classification and image detection has surpassed humans. Therefore, this paper combines deep learning and medical image segmentation, focusing on how to improve the accuracy and speed of segmentation algorithm of medical exercise rehabilitation image. Aiming at the shortcomings of traditional medical image recognition methods, a medical exercise rehabilitation image segmentation algorithm based on hierarchical features of convolutional neural networks is proposed, this paper calls it as hierarchical features of convolutional neural networks (HFCNN). The algorithm firstly samples the convolution output of multiple layers in the convolutional neural network to a unified scale and combines them to construct a hierarchical feature. This hierarchical feature combines the structural information of objects contained in the shallow layer of the network with the semantic information of objects contained in the deep layers of the network, so it has a strong ability to express. Secondly, the image can be segmented into multiple super pixels by the super pixel segmentation algorithm. The classifier is trained using the hierarchical features of the super pixel, and then the classification result is mapped back to the pixel. Finally, a fully connected conditional random field algorithm including one-potential potential energy and paired potential energy is constructed. The corresponding energy function is used to smooth the classification result of the pixel, and the regional consistency and continuity of the pixel mark are improved. Compared with many classical convolutional neural network algorithms, this algorithm not only accelerates the network convergence speed, shortens the training time, but also significantly improves the accuracy of segmentation algorithm of medical exercise rehabilitation image, showing good practical value.
- Research Article
31
- 10.1007/s11042-021-10515-w
- Feb 1, 2021
- Multimedia Tools and Applications
Traditional medical image segmentation methods have problems such as low segmentation accuracy and low adaptive ability. Therefore, many scholars have proposed a medical image segmentation method based on deep learning, which has achieved good results in the field of medical image segmentation. However, this type of method has the following problems in the application process: (1) Medical image segmentation target boundary positioning problem. Constrained by factors such as medical image contrast, heterogeneity, and boundary resolution, existing convolution models still cannot accurately locate boundaries. (2) Deep adaptability of deep learning network structure to medical images. Because medical images have more distinct and different feature information than natural images, the current deep learning-based medical segmentation methods have not fully considered this feature. In view of this, this paper proposes a multi-level boundary-aware RUNet segmentation model. The network structure consists of a U-Net-based segmentation network and a multi-level boundary detection network. It can solve the problem of boundary positioning. At the same time, in order to solve the problem of poor adaptability of deep learning network structures to medical images, this paper proposes to introduce a new interactive self-attention module into deep learning models. It can make the feature map get global information, and realize the effective extraction of medical image feature information. It solves the problem of weak matching between the deep learning network structure and medical images. Based on the above ideas, this paper proposes an image segmentation algorithm based on a multi-layer boundary perception-self-attention mechanism deep learning model. This method and other mainstream segmentation algorithms are used to perform experiments on related medical databases. The results show that the proposed method not only improves the segmentation effect significantly compared with traditional machine learning methods, but also improves it to a certain extent compared with other deep learning methods.
- Research Article
22
- 10.3389/fbioe.2024.1504249
- Dec 24, 2024
- Frontiers in bioengineering and biotechnology
Accurate image segmentation is crucial in medical imaging for quantifying diseases, assessing prognosis, and evaluating treatment outcomes. However, existing methods often fall short in integrating global and local features in a meaningful way, failing to give sufficient attention to abnormal regions and boundary details in medical images. These limitations hinder the effectiveness of segmentation techniques in clinical settings. To address these issues, we propose a novel deep learning-based approach, MIPC-Net, designed for precise boundary segmentation in medical images. Our approach, inspired by radiologists' working patterns, introduces two distinct modules: 1. Mutual Inclusion of Position and Channel Attention (MIPC) Module: To improve boundary segmentation precision, we present the MIPC module. This module enhances the focus on channel information while extracting position features and vice versa, effectively enhancing the segmentation of boundaries in medical images. 2. Skip-Residue Module: To optimize the restoration of medical images, we introduce Skip-Residue, a global residual connection. This module improves the integration of the encoder and decoder by filtering out irrelevant information and recovering the most crucial information lost during the feature extraction process. We evaluate the performance of MIPC-Net on three publicly accessible datasets: Synapse, ISIC2018-Task, and Segpc. The evaluation uses metrics such as the Dice coefficient (DSC) and Hausdorff Distance (HD). Our ablation study confirms that each module contributes to the overall improvement of segmentation quality. Notably, with the integration of both modules, our model outperforms state-of-the-art methods across all metrics. Specifically, MIPC-Net achieves a 2.23 mm reduction in Hausdorff Distance on the Synapse dataset, highlighting the model's enhanced capability for precise image boundary segmentation. The introduction of the novel MIPC and Skip-Residue modules significantly improves feature extraction accuracy, leading to better boundary recognition in medical image segmentation tasks. Our approach demonstrates substantial improvements over existing methods, as evidenced by the results on benchmark datasets.
- Research Article
465
- 10.1016/j.media.2019.101557
- Sep 7, 2019
- Medical Image Analysis
Exploring uncertainty measures in deep networks for Multiple sclerosis lesion detection and segmentation.
- Research Article
6
- 10.47392/irjaeh.2024.0353
- Nov 15, 2024
- International Research Journal on Advanced Engineering Hub (IRJAEH)
Medical image segmentation is a critical component in the development of computer-aided diagnosis and treatment planning systems. This paper provides a comprehensive survey of recent advances in segmentation techniques applied to various imaging modalities, including Magnetic Resonance Imaging (MRI). Traditional methods such as thresholding, region-growing, and active contours are reviewed alongside contemporary machine learning-based approaches, particularly deep learning models. The survey emphasizes the growing dominance of convolutional neural networks (CNNs) and their variants, including U-Net and Fully Convolutional Networks (FCNs), which have shown remarkable success in handling complex medical imaging challenges. Additionally, the paper discusses hybrid methods that combine classical techniques with artificial intelligence to improve accuracy and robustness in segmentation tasks. Key challenges such as class imbalance, boundary delineation, and computational efficiency are also highlighted. Future directions, including the integration of multi-modal data and advancements in self-supervised learning, are explored as potential solutions to overcome current limitations in medical image segmentation.
- Research Article
5
- 10.1016/j.vrih.2024.04.001
- Jun 1, 2024
- Virtual Reality & Intelligent Hardware
A review of medical ocular image segmentation
- Research Article
61
- 10.1109/tmi.2022.3197180
- Dec 1, 2022
- IEEE Transactions on Medical Imaging
The accurate segmentation of multiple types of lesions from adjacent tissues in medical images is significant in clinical practice. Convolutional neural networks (CNNs) based on the coarse-to-fine strategy have been widely used in this field. However, multi-lesion segmentation remains to be challenging due to the uncertainty in size, contrast, and high interclass similarity of tissues. In addition, the commonly adopted cascaded strategy is rather demanding in terms of hardware, which limits the potential of clinical deployment. To address the problems above, we propose a novel Prior Attention Network (PANet) that follows the coarse-to-fine strategy to perform multi-lesion segmentation in medical images. The proposed network achieves the two steps of segmentation in a single network by inserting a lesion-related spatial attention mechanism in the network. Further, we also propose the intermediate supervision strategy for generating lesion-related attention to acquire the regions of interest (ROIs), which accelerates the convergence and obviously improves the segmentation performance. We have investigated the proposed segmentation framework in two applications: 2D segmentation of multiple lung infections in lung CT slices and 3D segmentation of multiple lesions in brain MRIs. Experimental results show that in both 2D and 3D segmentation tasks our proposed network achieves better performance with less computational cost compared with cascaded networks. The proposed network can be regarded as a universal solution to multi-lesion segmentation in both 2D and 3D tasks. The source code is available at https://github.com/hsiangyuzhao/PANet.
- Research Article
45
- 10.1007/s12539-023-00585-9
- Sep 4, 2023
- Interdisciplinary sciences, computational life sciences
Accurate segmentation of medical images is essential for clinical decision-making, and deep learning techniques have shown remarkable results in this area. However, existing segmentation models that combine transformer and convolutional neural networks often use skip connections in U-shaped networks, which may limit their ability to capture contextual information in medical images. To address this limitation, we propose a coordinated mobile and residual transformer UNet (MRC-TransUNet) that combines the strengths of transformer and UNet architectures. Our approach uses a lightweight MR-ViT to address the semantic gap and a reciprocal attention module to compensate for the potential loss of details. To better explore long-range contextual information, we use skip connections only in the first layer and add MR-ViT and RPA modules in the subsequent downsampling layers. In our study, we evaluated the effectiveness of our proposed method on three different medical image segmentation datasets, namely, breast, brain, and lung. Our proposed method outperformed state-of-the-art methods in terms of various evaluation metrics, including the Dice coefficient and Hausdorff distance. These results demonstrate that our proposed method can significantly improve the accuracy of medical image segmentation and has the potential for clinical applications. Illustration of the proposed MRC-TransUNet. For the input medical images, we first subject them to an intrinsic downsampling operation and then replace the original jump connection structure using MR-ViT. The output feature representations at different scales are fused by the RPA module. Finally, an upsampling operation is performed to fuse the features to restore them to the same resolution as the input image.
- Research Article
16
- 10.1515/biol-2022-0665
- Aug 8, 2023
- Open Life Sciences
In accordance with the inability of various hair artefacts subjected to dermoscopic medical images, undergoing illumination challenges that include chest-Xray featuring conditions of imaging acquisi-tion situations built with clinical segmentation. The study proposed a novel deep-convolutional neural network (CNN)-integrated methodology for applying medical image segmentation upon chest-Xray and dermoscopic clinical images. The study develops a novel technique of segmenting medical images merged with CNNs with an architectural comparison that incorporates neural networks of U-net and fully convolutional networks (FCN) schemas with loss functions associated with Jaccard distance and Binary-cross entropy under optimised stochastic gradient descent + Nesterov practices. Digital image over clinical approach significantly built the diagnosis and determination of the best treatment for a patient’s condition. Even though medical digital images are subjected to varied components clarified with the effect of noise, quality, disturbance, and precision depending on the enhanced version of images segmented with the optimised process. Ultimately, the threshold technique has been employed for the output reached under the pre- and post-processing stages to contrast the image technically being developed. The data source applied is well-known in PH2 Database for Melanoma lesion segmentation and chest X-ray images since it has variations in hair artefacts and illumination. Experiment outcomes outperform other U-net and FCN architectures of CNNs. The predictions produced from the model on test images were post-processed using the threshold technique to remove the blurry boundaries around the predicted lesions. Experimental results proved that the present model has better efficiency than the existing one, such as U-net and FCN, based on the image segmented in terms of sensitivity = 0.9913, accuracy = 0.9883, and dice coefficient = 0.0246.
- Research Article
34
- 10.1155/2019/6134942
- Aug 1, 2019
- Contrast Media & Molecular Imaging
With the development of computer vision and image segmentation technology, medical image segmentation and recognition technology has become an important part of computer-aided diagnosis. The traditional image segmentation method relies on artificial means to extract and select information such as edges, colors, and textures in the image. It not only consumes considerable energy resources and people's time but also requires certain expertise to obtain useful feature information, which no longer meets the practical application requirements of medical image segmentation and recognition. As an efficient image segmentation method, convolutional neural networks (CNNs) have been widely promoted and applied in the field of medical image segmentation. However, CNNs that rely on simple feedforward methods have not met the actual needs of the rapid development of the medical field. Thus, this paper is inspired by the feedback mechanism of the human visual cortex, and an effective feedback mechanism calculation model and operation framework is proposed, and the feedback optimization problem is presented. A new feedback convolutional neural network algorithm based on neuron screening and neuron visual information recovery is constructed. So, a medical image segmentation algorithm based on a feedback mechanism convolutional neural network is proposed. The basic idea is as follows: The model for obtaining an initial region with the segmented medical image classifies the pixel block samples in the segmented image. Then, the initial results are optimized by threshold segmentation and morphological methods to obtain accurate medical image segmentation results. Experiments show that the proposed segmentation method has not only high segmentation accuracy but also extremely high adaptive segmentation ability for various medical images. The research in this paper provides a new perspective for medical image segmentation research. It is a new attempt to explore more advanced intelligent medical image segmentation methods. It also provides technical approaches and methods for further development and improvement of adaptive medical image segmentation technology.
- Research Article
- 10.1051/itmconf/20257302030
- Jan 1, 2025
- ITM Web of Conferences
Medical images have become an indispensable and important tool for the diagnosis of medical conditions and surgical guidance. As computer vision technology advances, Medical image segmentation technology has effectively assisted clinicians in making accurate diagnoses and providing personalized treatment. In this paper, some excellent medical image segmentation methods in recent years are summarized, and according to the deep learning method (e.g. Convolutional Neural Network (CNN), U- net, etc.), and traditional methods (such as active contour model, threshold segmentation model, etc.) are sorted out. This paper compares various image segmentation methods, analyzes their similarities and differences, and summarizes and looks forward to the future development of medical image segmentation technology. With the continuous advancement of computer vision models, medical image segmentation is expected to become increasingly accurate and efficient. This will significantly enhance the speed and accuracy of medical image processing, helping doctors to better identify and analyze diseases, thereby providing more accurate clinical diagnoses and treatment plans. With these technological advancements, future medical image segmentation will not only handle more complex images but also enable more intelligent and automated analysis, offering strong support for clinical practice.
- Research Article
23
- 10.1155/2020/1645479
- May 15, 2020
- Complexity
Medical image segmentation is a key technology for image guidance. Therefore, the advantages and disadvantages of image segmentation play an important role in image-guided surgery. Traditional machine learning methods have achieved certain beneficial effects in medical image segmentation, but they have problems such as low classification accuracy and poor robustness. Deep learning theory has good generalizability and feature extraction ability, which provides a new idea for solving medical image segmentation problems. However, deep learning has problems in terms of its application to medical image segmentation: one is that the deep learning network structure cannot be constructed according to medical image characteristics; the other is that the generalizability y of the deep learning model is weak. To address these issues, this paper first adapts a neural network to medical image features by adding cross-layer connections to a traditional convolutional neural network. In addition, an optimized convolutional neural network model is established. The optimized convolutional neural network model can segment medical images using the features of two scales simultaneously. At the same time, to solve the generalizability problem of the deep learning model, an adaptive distribution function is designed according to the position of the hidden layer, and then the activation probability of each layer of neurons is set. This enhances the generalizability of the dropout model, and an adaptive dropout model is proposed. This model better addresses the problem of the weak generalizability of deep learning models. Based on the above ideas, this paper proposes a medical image segmentation algorithm based on an optimized convolutional neural network with adaptive dropout depth calculation. An ultrasonic tomographic image and lumbar CT medical image were separately segmented by the method of this paper. The experimental results show that not only are the segmentation effects of the proposed method improved compared with those of the traditional machine learning and other deep learning methods but also the method has a high adaptive segmentation ability for various medical images. The research work in this paper provides a new perspective for research on medical image segmentation.