Conformations of γ‐Aminobutyric Acid (GABA): The Role of the n→π* Interaction

Abstract

g-Aminobutyric acid (GABA) is arguably the most important inhibitory neurotransmitter in the brain and brainstem/spinal cord. Owing to the high torsional flexibility of its heavyatom backbone, this molecular system has a large number of low-energy conformers (see Figure 1). Identifying the stable conformers of GABA can be relevant to understanding the selectivity of the biological processes in which the neurotransmitter participates. This can be done by placing GABA on a supersonic jet such that conformers are cooled down and trapped in their energy minima. In such an isolated environment the conformers with sufficient population can be detected and studied by spectroscopic methods. In this context, several methods have made great contributions to the elucidation of the structures of biomolecules in the gas phase. In the present work we have observed and characterized nine conformers of GABA using Fourier transform microwave spectroscopy in supersonic jets combined with laser ablation. Microwave spectroscopy, considered the most definitive gas-phase structural probe, can distinguish between different conformational structures since they have unique moments of inertia and give separate rotational spectra. In general, large molecules, in particular those of biological importance, have low vapor pressures and tend to degrade upon heating, making them unsuited for structural studies in the gas phase. Recently, rotational studies of biomolecules have entered in a new stage with the LAMB-FTMW experiment, which combines laser ablation (LA) with molecular beam Fourier transform microwave spectroscopy (MB-FTMW), an approach that overcomes the problems of thermal decomposition associated with conventional heating methods. To date, different aand b-amino acids have been studied using this technique, making it possible to characterize their preferred conformations. Even in conformationally challenging systems these can be identified by rotational spectroscopy, as has been illustrated with the assignment of seven low-energy conformers of serine and threonine, six of cysteine, and four of b-alanine and proline. In the present work, we have examined the conformations of GABA. In this system the separation of the polar amino and carboxylic groups, characteristic of many families of neurotransmitters, opens new conformational possibilities with respect to a-amino acids if one considers the balance of intramolecular forces that contribute to stabilizing the different conformations. The five hindered rotations around the single bonds generate a plethora of conformational species (Figure 1). An overall picture of the conformational landscape obtained from theoretical predictions at the MP2/6-311++G(d,p) level confirms the conformational richness of GABA: the 30 feasible conformers shown in Figure 1 were localized with relative energies below 900 cm . These conformers are labeled by two letters (a, G, or g) followed by a number. The first letter refers to the configuration at Ca and the second one to the configuration at Cg : a means anti conformers, G gauche conformers with positive value of the torsional angle CCOOH-Ca-Cb-Cg or N-Cg-Cb-Ca, and g gauche conformers Figure 1. Predicted low-energy conformers of GABA. The nine observed conformers are circled.