Abstract
ABSTRACTThe soil bacterium Psychrobacillus sp. strain AK 1817 was isolated from a tropical soil sample collected in Taiwan. Strain AK 1817 biotransforms the ergostane triterpenoid antcin K from the fungus Antrodia cinnamomea. The genome was sequenced using the PacBio RS II platform and consists of one chromosome of 4,096,020 bp, comprising 3,907 protein-coding genes, 75 tRNAs, 30 rRNAs, 5 noncoding RNAs (ncRNAs), and 100 pseudogenes.
Highlights
Psychrobacillus sp. strain AK 1817 is a Gram-positive, motile, endospore-forming, rod-shaped bacterium; of 4,311 soil bacteria isolated using the plating method, only Psychrobacillus sp. strain AK1817 was able to biotransform the triterpenoid antcin K into antcamphin E and antcamphin F (1)
The reads were assembled de novo using Canu v1.6 (2) with default settings
From the phylogenetic tree (Fig. 1), one can see that AK 1817 was closest to Psychrobacillus sp. strain BL-248-WT-3 (GenBank accession number NZ_JABAFC000000000), which was identified from domestic pig feces
Summary
Psychrobacillus sp. strain AK 1817 is a Gram-positive, motile, endospore-forming, rod-shaped bacterium; of 4,311 soil bacteria isolated using the plating method, only Psychrobacillus sp. strain AK1817 was able to biotransform the triterpenoid antcin K into antcamphin E and antcamphin F (1). Sequencing generated 149,490 subreads with a total length of 1,232,710,752 bp for a genome coverage of ;300Â. 149,490 subreads were obtained, for which the average, N50, and maximum read lengths were 8,246, 11,029, and 50,776 bp, respectively. The reads were assembled de novo using Canu v1.6 (2) with default settings.
Sign-in/Register to view highlights & summary Sign-in/Register to access full text options 
Talk to us
Join us for a 30 min session where you can share your feedback and ask us any queries you have
Schedule a callDisclaimer: All third-party content on this website/platform is and will remain the property of their respective owners and is provided on "as is" basis without any warranties, express or implied. Use of third-party content does not indicate any affiliation, sponsorship with or endorsement by them. Any references to third-party content is to identify the corresponding services and shall be considered fair use under The CopyrightLaw.
