Abstract

Membranes proteins make up more than 60% of current drug targets and account for approximately 30% or more of the cellular proteome. Access to this important class of proteins has been difficult due to their inherent insolubility and tendency to aggregate in aqueous solutions. Understanding membrane protein structure and function demands novel means of membrane protein production that preserve both their native conformational state as well as function. Over the last decade, cell-free expression systems have emerged as an important complement to cell-based expression of membrane proteins due to their simple and customizable experimental parameters. One approach to overcome the solubility and stability limitations of purified membrane proteins is to support them in stable, native-like states within nanolipoprotein particles (NLPs), aka nanodiscs. This has become common practice to facilitate biochemical and biophysical characterization of proteins of interest. NLP technology can be easily coupled with cell-free systems to achieve functional membrane protein production for this purpose. Our approach involves utilizing cell-free expression systems in the presence of NLPs or using co-translation techniques to perform one-pot expression and self-assembly of membrane protein/NLP complexes. We describe how cell-free reactions can be modified to render control over nanoparticle size and monodispersity in support of membrane protein production. These modifications have been exploited to facilitate co-expression of full-length functional membrane proteins such as G-protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs). In particular, we summarize the state of the art in NLP-assisted cell-free coexpression of these important classes of membrane proteins as well as evaluate the advances in and prospects for this technology that will drive drug discovery against these targets. We conclude with a prospective on the use of NLPs to produce as well as deliver functional mammalian membrane-bound proteins for a range of applications.

Highlights

  • Biochemical and structural characterization of a transmembrane protein requires isolation of the purified molecule independent of the many protein neighbors that are contained in the same membrane

  • nanolipoprotein particles (NLPs) have been a major tool for addressing important questions associated with membrane proteins

  • Cellfree one-pot assembly of NLPs is a robust method for effective solubilization of membrane proteins

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Summary

Introduction

Biochemical and structural characterization of a transmembrane protein requires isolation of the purified molecule independent of the many protein neighbors that are contained in the same membrane This can be accomplished using detergents that are capable of dissociating and solubilizing the individual membrane protein components by acting as a micelle-forming lipid bilayer mimetic, purifying the protein of interest using conventional techniques in the presence of a detergent (Garavito and Ferguson-Miller, 2001). Loss of functionally important bound phospholipids can lead to the deterioration of activity and may perturb protein conformation to the point of instability and aggregation These factors contribute to the reputation of purified membrane proteins as unstable and temperamental, but there is increasing recognition that retaining protein function and stability while enabling adequate solubilization and purification may be achieved through improved membrane mimetics

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