Abstract

SummaryCell-cell heterogeneity can facilitate lineage choice during embryonic development because it primes cells to respond to differentiation cues. However, remarkably little is known about the origin of heterogeneity or whether intrinsic and extrinsic variation can be controlled to generate reproducible cell type proportioning seen in vivo. Here, we use experimentation and modeling in D. discoideum to demonstrate that population-level cell cycle heterogeneity can be optimized to generate robust cell fate proportioning. First, cell cycle position is quantitatively linked to responsiveness to differentiation-inducing signals. Second, intrinsic variation in cell cycle length ensures cells are randomly distributed throughout the cell cycle at the onset of multicellular development. Finally, extrinsic perturbation of optimal cell cycle heterogeneity is buffered by compensatory changes in global signal responsiveness. These studies thus illustrate key regulatory principles underlying cell-cell heterogeneity optimization and the generation of robust and reproducible fate choice in development.

Highlights

  • Tissue patterning and cell type proportioning are robust and reproducible

  • We took an unbiased approach in which single-cell RNA sequencing (RNAseq) was carried out on 81 log-phase vegetative cells to identify genes with highly variable expression patterns

  • A principal-component analysis (PCA) using the 500 most variable genes divided the cells into the same two groups (Figure 1B), and the percentage of cells in each group (31% and 69%) roughly corresponded to the ratio of prestalk and prespore cells seen during development

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Summary

Introduction

Tissue patterning and cell type proportioning are robust and reproducible. cell-cell heterogeneity can prevent cell populations from behaving in a coordinated fashion. Many developmental systems are regulative and can correct errors (Lawrence and Levine, 2006). Suggest that heterogeneity can increase the spectrum of differentiation capabilities of cells in a uniform environment (Altschuler and Wu, 2010; Balazsi et al, 2011). Most notably, this leads to random ‘‘salt-and-pepper’’ differentiation where reproducible proportions of different cell types still arise. Examples range from competence in B. subtilis (Maamar et al, 2007) to lineage specification in the mouse blastocyst (Dietrich and Hiiragi, 2007)

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