Abstract

A dominant hallmark of living systems is their ability to adapt to changes in the environment by learning and evolving. Nature does this so superbly that intensive research efforts are now attempting to mimic biological processes. Initially this biomimicry involved developing synthetic methods to generate complex bioactive natural products. Recent work is attempting to understand how molecular machines operate so their principles can be copied, and learning how to employ biomimetic evolution and learning methods to solve complex problems in science, medicine and engineering. Automation, robotics, artificial intelligence, and evolutionary algorithms are now converging to generate what might broadly be called in silico-based adaptive evolution of materials. These methods are being applied to organic chemistry to systematize reactions, create synthesis robots to carry out unit operations, and to devise closed loop flow self-optimizing chemical synthesis systems. Most scientific innovations and technologies pass through the well-known “S curve”, with slow beginning, an almost exponential growth in capability, and a stable applications period. Adaptive, evolving, machine learning-based molecular design and optimization methods are approaching the period of very rapid growth and their impact is already being described as potentially disruptive. This paper describes new developments in biomimetic adaptive, evolving, learning computational molecular design methods and their potential impacts in chemistry, engineering, and medicine.

Highlights

  • There is still not a clear understanding of how ‘life’ emerges from ‘non-life’

  • As life is by definition reproductive, a mechanism for copying is essential for indefinite existence, and for evolution to act through mutation and natural selection on a population of related individuals

  • We provide a brief summary of these types of machine learning algorithms to assist those organic chemists who are not familiar with them

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Summary

Open Access

Address: 1CSIRO Manufacturing, Bayview Avenue, Clayton 3168, Australia, 2Monash Institute of Pharmaceutical Sciences, 392 Royal Parade, Parkville 3052, Australia and 3Department of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Kingsbury Drive, Melbourne, Victoria 3086, Australia This article is part of the Thematic Series "From prebiotic chemistry to molecular evolution". Keywords: automated chemical synthesis; deep learning; evolutionary algorithms; in silico evolution; machine learning; materials design and development; neural networks

Introduction
Living versus synthetic systems
Machine learning and artificial intelligence
Test set SEP
Evolving materials for the future
Mutation operators
Evolution coupled with learning
License and Terms
Full Text
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