Abstract
Many bacteria mediate important life-style decisions by varying levels of the second messenger c-di-GMP. Behavioral transitions result from the coordination of complex cellular processes such as motility, surface adherence or the production of virulence factors and toxins. While the regulatory mechanisms responsible for these processes have been elucidated in some cases, the global pleiotropic effects of c-di-GMP are poorly understood, primarily because c-di-GMP networks are inherently complex in most bacteria. Moreover, the quantitative relationships between cellular c-di-GMP levels and c-di-GMP dependent phenotypes are largely unknown. Here, we dissect the c-di-GMP network of Caulobacter crescentus to establish a global and quantitative view of c-di-GMP dependent processes in this organism. A genetic approach that gradually reduced the number of diguanylate cyclases identified novel c-di-GMP dependent cellular processes and unraveled c-di-GMP as an essential component of C. crescentus cell polarity and its bimodal life cycle. By varying cellular c-di-GMP concentrations, we determined dose response curves for individual c-di-GMP-dependent processes. Relating these values to c-di-GMP levels modeled for single cells progressing through the cell cycle sets a quantitative frame for the successive activation of c-di-GMP dependent processes during the C. crescentus life cycle. By reconstructing a simplified c-di-GMP network in a strain devoid of c-di-GMP we defined the minimal requirements for the oscillation of c-di-GMP levels during the C. crescentus cell cycle. Finally, we show that although all c-di-GMP dependent cellular processes were qualitatively restored by artificially adjusting c-di-GMP levels with a heterologous diguanylate cyclase, much higher levels of the second messenger are required under these conditions as compared to the contribution of homologous c-di-GMP metabolizing enzymes. These experiments suggest that a common c-di-GMP pool cannot fully explain spatiotemporal regulation by c-di-GMP in C. crescentus and that individual enzymes preferentially regulate specific phenotypes during the cell cycle.
Highlights
Cyclic di-GMP is a ubiquitous second messenger that serves as key regulator of bacterial life-style decisions
We find that a c-di-GMP free strain shows severe developmental defects, a loss of cell polarity and defective cell division
By determining c-di-GMP dose-response curves for individual processes and relating these to c-diGMP levels, which were modeled for single cells progressing through the cell cycle, we define a quantitative frame for the c-di-GMP dependent program during the C. crescentus life cycle
Summary
Cyclic di-GMP is a ubiquitous second messenger that serves as key regulator of bacterial life-style decisions. In the most extreme cases, over 100 proteins are potentially involved in cdi-GMP metabolism, emphasizing the importance of c-di-GMP for bacterial signaling and adaptation [3] This is reflected by an ever-increasing number of established c-di-GMP receptors that regulate a wide range of cellular processes on the transcriptional, translational, or post-translational level [2,4]. This includes the synthesis of virulence factors and toxins, the production of adhesins and biofilm matrix components, the regulation of different forms of cell motility, as well as cell cycle progression [2,4]. The physiological significance of such large differences in affinity is unclear
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