Abstract

A plethora of pathogenic viruses colonize bats. However, bat bacterial flora and its zoonotic threat remain ill defined. In a study initially conducted as a quantitative metagenomic analysis of the fecal bacterial flora of the Daubenton's bat in Finland, we unexpectedly detected DNA of several hemotrophic and ectoparasite-transmitted bacterial genera, including Bartonella. Bartonella spp. also were either detected or isolated from the peripheral blood of Daubenton's, northern, and whiskered bats and were detected in the ectoparasites of Daubenton's, northern, and Brandt's bats. The blood isolates belong to the Candidatus-status species B. mayotimonensis, a recently identified etiologic agent of endocarditis in humans, and a new Bartonella species (B. naantaliensis sp. nov.). Phylogenetic analysis of bat-colonizing Bartonella spp. throughout the world demonstrates a distinct B. mayotimonensis cluster in the Northern Hemisphere. The findings of this field study highlight bats as potent reservoirs of human bacterial pathogens.

Highlights

  • A plethora of pathogenic viruses colonize bats

  • We have described the detailed protocols, including bat sampling for peripheral blood, fecal droppings, and ectoparasites; metagenomic analysis of fecal DNA; isolation of Bartonella from peripheral blood; extraction of DNA from bat blood, ectoparasites, and Bartonella isolates; Bartonella and ectoparasite PCR analyses; transmission electron

  • A new type of Bartonella was detected in a resected aortic valve tissue of a human endocarditis patient [15]

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Summary

Introduction

A plethora of pathogenic viruses colonize bats. bat bacterial flora and its zoonotic threat remain ill defined. In a study initially conducted as a quantitative metagenomic analysis of the fecal bacterial flora of the Daubenton’s bat in Finland, we unexpectedly detected DNA of several hemotrophic and ectoparasite-transmitted bacterial genera, including Bartonella. Phylogenetic analysis of bat-colonizing Bartonella spp. throughout the world demonstrates a distinct B. mayotimonensis cluster in the Northern Hemisphere. The findings of this field study highlight bats as potent reservoirs of human bacterial pathogens. Our initial objective in 2010 and 2011 was to conduct a quantitative metagenomic analysis of the fecal bacterial flora of the Daubenton’s bat (Myotis daubentonii) in Finland. The study further focused on detecting and isolating Bartonella spp. from peripheral blood and ectoparasites of several bat species in Finland in 2012

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