Abstract

Brazil detected community transmission of COVID-19 on March 13, 2020. In this study we identified which areas in the country were the most vulnerable for COVID-19, both in terms of the risk of arrival of cases, the risk of sustained transmission and their social vulnerability. Probabilistic models were used to calculate the probability of COVID-19 spread from São Paulo and Rio de Janeiro, the initial hotspots, using mobility data from the pre-epidemic period, while multivariate cluster analysis of socio-economic indices was done to identify areas with similar social vulnerability. The results consist of a series of maps of effective distance, outbreak probability, hospital capacity and social vulnerability. They show areas in the North and Northeast with high risk of COVID-19 outbreak that are also highly socially vulnerable. Later, these areas would be found the most severely affected. The maps produced were sent to health authorities to aid in their efforts to prioritize actions such as resource allocation to mitigate the effects of the pandemic. In the discussion, we address how predictions compared to the observed dynamics of the disease.

Highlights

  • As of 21 March 2020, the pandemic of COVID-19 had reached 184 countries with 266,073 confirmed cases and 11,184 deaths, globally [1]

  • The first imported case of COVID-19 was confirmed in Brazil on February 26, 2020, in the city of São Paulo [2], only two months after the alert on COVID-19 went off in China

  • Brazil is divided into 558 micro-regional administrative units, with population sizes varying from 13 million people in the metropolitan area of São Paulo to 2, 703 in Fernando de Noronha island, in Pernambuco

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Summary

Introduction

As of 21 March 2020, the pandemic of COVID-19 had reached 184 countries with 266,073 confirmed cases and 11,184 deaths, globally [1]. The first imported case of COVID-19 was confirmed in Brazil on February 26, 2020, in the city of São Paulo [2], only two months after the alert on COVID-19 went off in China. At this date, all twenty seven federative units had reported suspect cases of COVID-19 infection, while 16 states and the Federal District had confirmed 1128 cases (11,278 under investigation) and 18 deaths [3]. São Paulo and Rio de Janeiro states identified virus community transmission on March 13, 2020 [4,5,6].

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