Abstract
Radiomics, quantitative feature extraction from radiological images, can improve disease diagnosis and prognostication. However, radiomic features are susceptible to image acquisition and segmentation variability. Ideally, only features robust to these variations would be incorporated into predictive models, for good generalisability. We extracted 93 radiomic features from carotid artery computed tomography angiograms of 41 patients with cerebrovascular events. We tested feature robustness to region-of-interest perturbations, image pre-processing settings and quantisation methods using both single- and multi-slice approaches. We assessed the ability of the most robust features to identify culprit and non-culprit arteries using several machine learning algorithms and report the average area under the curve (AUC) from five-fold cross validation. Multi-slice features were superior to single for producing robust radiomic features (67 vs. 61). The optimal image quantisation method used bin widths of 25 or 30. Incorporating our top 10 non-redundant robust radiomics features into ElasticNet achieved an AUC of 0.73 and accuracy of 69% (compared to carotid calcification alone [AUC: 0.44, accuracy: 46%]). Our results provide key information for introducing carotid CT radiomics into clinical practice. If validated prospectively, our robust carotid radiomic set could improve stroke prediction and target therapies to those at highest risk.
Highlights
Radiomics, quantitative feature extraction from radiological images, can improve disease diagnosis and prognostication
Carotid computed tomography (CT) angiography (CTA) scans from 41 patients with previous stroke or transient ischaemic attack (TIA) were analysed in this study comprising 41 culprit and 41 non-culprit carotid arteries (82 carotid arteries in total)
There were similarities between the radiomic features with poor robustness in both single-slice and multi-slice analysis to include the radiomic features: First Order: 10th Percentile and Grey Level Dependence Matrix (GLDM): Low Grey Level Emphasis. These radiomic features are related to low grey values within the CTA image and most likely reflect the varying amounts of carotid artery perivascular fat captured in the segmentation mask following the morphological perturbations
Summary
Quantitative feature extraction from radiological images, can improve disease diagnosis and prognostication. Radiomic features are susceptible to variations[15,16], including image acquisition (e.g. use of different CT scanner manufacturers and models, acquisition protocols and image reconstruction methods), image segmentation (e.g. inter-observer and intraobserver variability in delineating the region-of-interest [ROI]/volume-of-interest [VOI]) and at the feature extraction stage (e.g. use of different radiomics software, different image pre-processing settings or radiomic feature definitions). To minimise such v ariations[6], there is a growing call for the standardisation of protocols at every stage of the radiomics w orkflow[17]. These ‘robust’ features are expected to perform well when tested on new image datasets, a characteristic referred to as ‘good generalisability’[18]
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