Abstract
Alzheimer’s disease (AD) is an increasing concern in human health. Despite significant research, highly effective drugs to treat AD are lacking. The present study describes the text mining process to identify drug candidates from a traditional Chinese medicine (TCM) database, along with associated protein target mechanisms. We carried out text mining to identify literatures that referenced both AD and TCM and focused on identifying compounds and protein targets of interest. After targeting one potential TCM candidate, corresponding protein-protein interaction (PPI) networks were assembled in STRING to decipher the most possible mechanism of action. This was followed by validation using Western blot and co-immunoprecipitation in an AD cell model. The text mining strategy using a vast amount of AD-related literature and the TCM database identified curcumin, whose major component was ferulic acid (FA). This was used as a key candidate compound for further study. Using the top calculated interaction score in STRING, BACE1 and MMP2 were implicated in the activity of FA in AD. Exposure of SHSY5Y-APP cells to FA resulted in the decrease in expression levels of BACE-1 and APP, while the expression of MMP-2 and MMP-9 increased in a dose-dependent manner. This suggests that FA induced BACE1 and MMP2 pathways maybe novel potential mechanisms involved in AD. The text mining of literature and TCM database related to AD suggested FA as a promising TCM ingredient for the treatment of AD. Potential mechanisms interconnected and integrated with Aβ aggregation inhibition and extracellular matrix remodeling underlying the activity of FA were identified using in vitro studies.
Highlights
Alzheimer’s disease (AD) is a chronic neurodegenerative disease that usually progresses from short memory loss to dementia, and accounts for 50%–70% of dementia cases (Burns and Iliffe, 2009)
We report an approach for finding an appropriate traditional Chinese medicine (TCM) for AD through the utilization of text-mining from literature database, exploring the underlying therapeutic mechanisms followed by searching for protein-protein interactions (PPI) using the STRING platform, and using the SHSY5Y-APP AD cell line model for validation
Our findings suggested that ferulic acid (FA) might be a promising multitargeted TCM with a therapeutic potential for AD (Jung et al, 2016)
Summary
Alzheimer’s disease (AD) is a chronic neurodegenerative disease that usually progresses from short memory loss to dementia, and accounts for 50%–70% of dementia cases (Burns and Iliffe, 2009). According to the World Alzheimer Report (Prince, 2015), 46.8 million people worldwide are living with dementia, and this number is estimated to reach 131.5 million by 2050, which will result in an Application of Ferulic Acid in Alzheimer’s Disease increasing burden on society and families. Based on the failure of a number of novel AD drugs, investigators are increasingly convinced that AD is not a single but rather a multifactorial disease (Iqbal et al, 2013), and drugs that target one node on the classical pathway have little effect on the AD disease network. Since AD is a multifactorial disease, drugs that modulate systemic or multiple targets are of interest
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