Abstract

.Significance: Speckle noise limits the diagnostic capabilities of optical coherence tomography (OCT) images, causing both a reduction in contrast and a less accurate assessment of the microstructural morphology of the tissue.Aim: We present a speckle-noise reduction method for OCT volumes that exploits the advantages of adaptive-noise wavelet thresholding with a wavelet compounding method applied to several frames acquired from consecutive positions. The method takes advantage of the wavelet representation of the speckle statistics, calculated properly from a homogeneous sample or a region of the noisy volume.Approach: The proposed method was first compared quantitatively with different state-of-the-art approaches by being applied to three different clinical dermatological OCT volumes with three different OCT settings. The method was also applied to a public retinal spectral-domain OCT dataset to demonstrate its applicability to different imaging modalities.Results: The results based on four different metrics demonstrate that the proposed method achieved the best performance among the tested techniques in suppressing noise and preserving structural information.Conclusions: The proposed OCT denoising technique has the potential to adapt to different image OCT settings and noise environments and to improve image quality prior to clinical diagnosis based on visual assessment.

Highlights

  • Optical coherence tomography (OCT)[1] is an optical imaging technique that allows cross-sectional views of in vivo tissue in real time with micrometer resolution and at depths of up to two millimeters

  • The most significant dermatological applications of OCT are in assessing non-melanoma skin cancers such as basal cell carcinoma (BCC) and in reducing the need for diagnostic biopsies.[6,7,8]

  • Because it uses spatially coherent illumination, OCT images are affected by the speckle phenomenon, which has a dual role as both a source of noise and a carrier of information.[9,10]

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Summary

Introduction

Optical coherence tomography (OCT)[1] is an optical imaging technique that allows cross-sectional views of in vivo tissue in real time with micrometer resolution and at depths of up to two millimeters. OCT has been used to study a variety of dermatological disorders.[4,5] The most significant dermatological applications of OCT are in assessing non-melanoma skin cancers such as basal cell carcinoma (BCC) and in reducing the need for diagnostic biopsies.[6,7,8] Because it uses spatially coherent illumination, OCT images are affected by the speckle phenomenon, which has a dual role as both a source of noise and a carrier of information.[9,10] Speckle carrying signal information is the result of the back scattering of the incident photons, whereas speckle noise is caused by the random interference between multiple reflected photons coming from multiple directions. The speckle properties are affected by the scale representation, the optical settings, and the scattering properties of the biological tissue.[11]

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