Abstract

The opening of ion channels is proposed to arise from bending of the pore inner helices that enables them to pivot away from the central axis creating a cytosolic opening for ion diffusion. The flexibility of the inner helices is suggested to occur either at a conserved glycine located adjacent to the selectivity filter (glycine gating hinge) and/or at a second site occupied by glycine or proline containing motifs. Sequence alignment with other K+ channels shows that hERG possesses glycine residues (Gly648 and Gly657) at each of these putative hinge sites. In apparent contrast to the hinge hypotheses, substitution of both glycine residues for alanine causes little effect on either the voltage-dependence or kinetics of channel activation, and open state block by intracellular blockers. Substitution of the glycines with larger hydrophobic residues causes a greater propensity for the channel to open. We propose that in contrast to Shaker the pore of hERG is intrinsically more stable in the open than the closed conformation and that substitution at Gly648 or Gly657 further shifts the gating equilibrium to favor the open state. Molecular dynamics simulations indicate the S6 helices of hERG are inherently flexible, even in the absence of the glycine residues. Thus hERG activation gating exhibits important differences to other Kv channels. Our findings indicate that the hERG inner helix glycine residues are required for the tight packing of the channel helices and that the flexibility afforded by glycine or proline residues is not universally required for activation gating.

Highlights

  • The opening of ion channels is proposed to arise from bending of the pore inner helices that enables them to pivot away from the central axis creating a cytosolic opening for ion diffusion

  • Our findings indicate that the hERG inner helix glycine residues are required for the tight packing of the channel helices and that the flexibility afforded by glycine or proline residues is not universally required for activation gating

  • To investigate if either of these glycines in hERG (Gly648 and Gly657) are required for normal channel gating they were individually substituted for alanine (a residue that stabilizes ␣-helices [21, 22]), and the activation and deactivation properties compared with WT hERG

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Summary

The abbreviations used are

Voltage-gated family of potassium channels; hERG, human ether-a-go-go-related gene; POPC, palmitoyl-oleoyl-phosphatidylcholine; MES, 4-morpholineethanesulfonic acid; WT, wild type. The experimental results from a number of Kϩ channel studies suggest a common theme in which glycines and prolines on the inner helices are required for bending during channel gating. The assertions that these function as hinge points and are universal to ion channels are not supported by the observation that in some channels substituting for alanine, a residue that stabilizes ␣-helices [21, 22], has little effect on channel gating [23, 24]. Gly648 aligns with the putative glycine gating hinge and Gly657 is in the analogous position to the second proline in the Pro-X-Pro motif in Kv channels. Our results indicate that S6 glycines are not required as gating hinges but the small side chain enables tight packing within the pore of the channel that is essential for normal activation gating

EXPERIMENTAL PROCEDURES
RESULTS
DISCUSSION
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