A numerical framework for computing steady states of structured population models and their stability.
Structured population models are a class of general evolution equations which are widely used in the study of biological systems. Many theoretical methods are available for establishing existence and stability of steady states of general evolution equations. However, except for very special cases, finding an analytical form of stationary solutions for evolution equations is a challenging task. In the present paper, we develop a numerical framework for computing approximations to stationary solutions of general evolution equations, which can also be used to produce approximate existence and stability regions for steady states. In particular, we use the Trotter-Kato Theorem to approximate the infinitesimal generator of an evolution equation on a finite dimensional space, which in turn reduces the evolution equation into a system of ordinary differential equations. Consequently, we approximate and study the asymptotic behavior of stationary solutions. We illustrate the convergence of our numerical framework by applying it to a linear Sinko-Streifer structured population model for which the exact form of the steady state is known. To further illustrate the utility of our approach, we apply our framework to nonlinear population balance equation, which is an extension of well-known Smoluchowski coagulation-fragmentation model to biological populations. We also demonstrate that our numerical framework can be used to gain insight about the theoretical stability of the stationary solutions of the evolution equations. Furthermore, the open source Python program that we have developed for our numerical simulations is freely available from our GitHub repository (github.com/MathBioCU).
- Research Article
12
- 10.1007/s00023-005-0257-1
- Apr 18, 2006
- Annales Henri Poincaré
By applying linear response theory and the Onsager principle, the power (per unit area) needed to make a planar interface move with velocity V is found to be equal to V2/ μ, μ a mobility coefficient. To verify such a law, we study a one dimensional model where the interface is the stationary solution of a non local evolution equation, called an instanton. We then assign a penalty functional to orbits which deviate from solutions of the evolution equation and study the optimal way to displace the instanton. We find that the minimal penalty has the expression V2/ μ only when V is small enough. Past a critical speed, there appear nucleations of the other phase ahead of the front, their number and location are identified in terms of the imposed speed.
- Research Article
1
- 10.1051/epjconf/201819103002
- Jan 1, 2018
- EPJ Web of Conferences
We study solutions of the equation which describes the evolution of a neutrino propagating in dense homogeneous medium in the framework of the quantum field theory. In the two-flavor model the explicit form of Green function is obtained, and as a consequence the dispersion law for a neutrino in matter is derived. Both the solutions describing the stationary states and the spin-flavor coherent states of the neutrino are found. It is shown that the stationary states of the neutrino are different from the mass states, and the wave function of a state with a definite flavor should be constructed as a linear combination of the wave functions of the stationary states with coefficients, which depend on the mixing angle in matter. In the ultra-relativistic limit the wave functions of the spin-flavor coherent states coincide with the solutions of the quasi-classical evolution equation. Quasi-classical approximation of the wave functions of spin-flavor coherent states is used to calculate the probabilities of transitions between neutrino states with definite flavor and helicity.
- Research Article
3
- 10.13189/ms.2019.070102
- Mar 1, 2019
- Mathematics and Statistics
Exact traveling (solitary) wave solutions of nonlinear partial differential equations (NLPDEs) are analyzed for third-order nonlinear evolution equations.These equations have indeterminant homogenous balance and therefore cannot be solved by the Power Index Method (PIM).Some evolution equations are linearizable where solutions are transferred from those of a linear PDE.For other evolution equations transforming to a NLPDE which has a homogenous balance gives rise to possible solutions by the PIM.The solutions for evolution equations that are not linearizable are developed here.
- Research Article
2
- 10.1016/j.jcp.2004.07.014
- Sep 11, 2004
- Journal of Computational Physics
Pseudospectral solution of linear evolution equations of second order in space and time on unstructured quadrilateral subdomain topologies
- Dissertation
- 10.14264/09b9a6a
- Nov 9, 2021
A study on swirling plume enhanced natural draft dry cooling towers
- Research Article
12
- 10.1007/s10808-005-0136-z
- Nov 1, 2005
- Journal of Applied Mechanics and Technical Physics
All invariant and partially invariant solutions of the Green-Naghdi equations are obtained that describe the second approximation of shallow water theory. It is proved that all nontrivial invariant solutions belong to one of the following types: Galilean-invariant, stationary, and self-similar solutions. The Galilean-invariant solutions are described by the solutions of the second Painleve equation, the stationary solutions by elliptic functions, and the self-similar solutions by the solutions of the system of ordinary differential equations of the fourth order. It is shown that all partially invariant solutions reduce to invariant solutions.
- Research Article
8
- 10.1016/j.jcp.2019.05.013
- May 15, 2019
- Journal of Computational Physics
A fast compact time integrator method for a family of general order semilinear evolution equations
- Research Article
8
- 10.1016/0022-247x(81)90154-2
- Nov 1, 1981
- Journal of Mathematical Analysis and Applications
Coincident bifurcation of equilibrium and periodic solutions of evolution equations
- Research Article
47
- 10.1007/s10957-014-0539-1
- Mar 14, 2014
- Journal of Optimization Theory and Applications
Sensitivity analysis provides useful information for equation-solving, optimization, and post-optimality analysis. However, obtaining useful sensitivity information for systems with nonsmooth dynamic systems embedded is a challenging task. In this article, for any locally Lipschitz continuous mapping between finite-dimensional Euclidean spaces, Nesterov's lexicographic derivatives are shown to be elements of the plenary hull of the (Clarke) generalized Jacobian whenever they exist. It is argued that in applications, and in several established results in nonsmooth analysis, elements of the plenary hull of the generalized Jacobian of a locally Lipschitz continuous function are no less useful than elements of the generalized Jacobian itself. Directional derivatives and lexicographic derivatives of solutions of parametric ordinary differential equation (ODE) systems are expressed as the unique solutions of corresponding ODE systems, under Caratheodory-style assumptions. Hence, the scope of numerical methods for nonsmooth equation-solving and local optimization is extended to systems with nonsmooth parametric ODEs embedded.
- Research Article
4
- 10.1134/s0040579506060017
- Dec 1, 2006
- Theoretical Foundations of Chemical Engineering
New classes of exact solutions of nonlinear equations and systems of equations that are encountered in the mass and heat transfer theory of reacting media and mathematical biology are described. General equations and systems of equations where the rates of chemical reactions depend on one or several arbitrary functions are the focus of attention. Solutions with functional arbitrariness are found (they are expressed through the solutions of a linear heat transfer equation and the solutions of nonlinear systems of ordinary differential equations); solutions with generalized separation of variables and other solutions are described. The transfer coefficients and the kinetics of chemical reactions are considered as functions of temperature (concentration).
- Conference Article
124
- 10.1109/cdc.2009.5400045
- Dec 1, 2009
A dimension reduction method called discrete empirical interpolation is proposed and shown to dramatically reduce the computational complexity of the popular proper orthogonal decomposition (POD) method for constructing reduced-order models for unsteady and/or parametrized nonlinear partial differential equations (PDEs). In the presence of a general nonlinearity, the standard POD-Galerkin technique reduces dimension in the sense that far fewer variables are present, but the complexity of evaluating the nonlinear term remains that of the original problem. Empirical interpolation posed in finite dimensional function space is a modification of POD that reduces complexity of the nonlinear term of the reduced model to a cost proportional to the number of reduced variables obtained by POD. We propose a discrete empirical interpolation method (DEIM), a variant that is suitable for reducing the dimension of systems of ordinary differential equations (ODEs) of a certain type. As presented here, it is applicable to ODEs arising from finite difference discretization of unsteady time dependent PDE and/or parametrically dependent steady state problems. However, the approach extends to arbitrary systems of nonlinear ODEs with minor modification. Our contribution is a greatly simplified description of EIM in a finite dimensional setting that possesses an error bound on the quality of approximation. An application of DEIM to a finite difference discretization of the 1-D FitzHugh-Nagumo equations is shown to reduce the dimension from 1024 to order 5 variables with negligible error over a long-time integration that fully captured non-linear limit cycle behavior. We also demonstrate applicability in higher spatial dimensions with similar state space dimension reduction and accuracy results.
- Research Article
30
- 10.1016/0021-8928(71)90053-0
- Jan 1, 1971
- Journal of Applied Mathematics and Mechanics
The onset of auto-oscillations in a fluid: PMM Vol. 35. No. 4. 1971. pp.638–655
- Single Book
46
- 10.1142/3407
- Jul 1, 1997
This book offers an elementary and self-contained introduction to many fundamental issues concerning approximate solutions of operator equations formulated in an abstract Banach space setting, including important topics such as solvability, computational schemes, convergence stability and error estimates. The operator equations under investigation include various linear and nonlinear types of ordinary and partial differential equations, integral equations and abstract evolution equations, which are frequently involved in applied mathematics and engineering applications. Chapter 1 gives an overview of a general projective approximation scheme for operator equations, which covers several well-known approximation methods as special cases, such as the Galerkin-type methods, collocation-like methods, and least-square-based methods. Chapter 2 discusses approximate solutions of compact linear operator equations, and chapter 3 studies both classical and generalized solutions, as well as the projective approximations, for general linear operator equations. Chapter 4 gives an introduction to some important concepts, such as the topological degree and the fixed point principle, with applications to projective approximations of nonlinear operator equations. Linear and nonlinear monotone operator equations and their projective approximators are investigated in chapter 5, while chapter 6 addresses basic questions in discrete and semi-discrete projective approximations for two important classes of abstract operator evolution equations. Each chapter contains well-selected examples and exercises, for the purposes of demonstrating the fundamental theories and methods developed in the text and familiarizing the reader with functional analysis techniques useful for numerical solutions of various operator equations.
- Research Article
2
- 10.1515/anly-2015-5007
- Aug 20, 2015
- Analysis
We show how to approximate a solution of the first order linear evolution equation, together with its possible analytic continuation, using a solution of the time-fractional equation of order
- Research Article
1
- 10.1515/math-2019-0001
- Jan 31, 2019
- Open Mathematics
It is shown that, if all weak solutions of the evolution equation $$\begin{array}{} \displaystyle y'(t)=Ay(t),\, t\ge 0, \end{array} $$ with a scalar type spectral operator A in a complex Banach space are Gevrey ultradifferentiable of orders less than one, then the operator A is necessarily bounded.
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