Abstract

Understanding Parkinson’s disease (PD), in particular in its earliest phases, is important for diagnosis and treatment. However, human brain samples are collected post-mortem, reflecting mainly end-stage disease. Because brain samples of mouse models can be collected at any stage of the disease process, they are useful in investigating PD progression. Here, we compare ventral midbrain transcriptomics profiles from α-synuclein transgenic mice with a progressive, early PD-like striatal neurodegeneration across different ages using pathway, gene set, and network analysis methods. Our study uncovers statistically significant altered genes across ages and between genotypes with known, suspected, or unknown function in PD pathogenesis and key pathways associated with disease progression. Among those are genotype-dependent alterations associated with synaptic plasticity and neurotransmission, as well as mitochondria-related genes and dysregulation of lipid metabolism. Age-dependent changes were among others observed in neuronal and synaptic activity, calcium homeostasis, and membrane receptor signaling pathways, many of which linked to G-protein coupled receptors. Most importantly, most changes occurred before neurodegeneration was detected in this model, which points to a sequence of gene expression events that may be relevant for disease initiation and progression. It is tempting to speculate that molecular changes similar to those changes observed in our model happen in midbrain dopaminergic neurons before they start to degenerate. In other words, we believe we have uncovered molecular changes that accompany the progression from preclinical to early PD.

Highlights

  • The current understanding of the molecular mechanisms behind initiation and progression of Parkinson’s disease (PD) is still limited

  • We found that a key factor of this model is age-dependent degeneration in the dorsal striatum, the main projection area of substantia nigra (SN) dopaminergic neurons [106, 131], without these neurons being lost, a phenotype reminiscent of prodromal and early PD [63]

  • We provide the first characterization of the novel Bacterial Artificial Chromosome (BAC)-Tg3(SNCA*E46K) PD mouse model, a genomic α-syn overexpressor carrying the E46K familial PD mutation with a brain regional transgenic expression closely matching that of endogenous α-syn

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Summary

Introduction

The current understanding of the molecular mechanisms behind initiation and progression of Parkinson’s disease (PD) is still limited. Extended author information available on the last page of the article. Samples from PD mouse models can be collected at any stage of the disease process, and a shared genetic background reduces inter-individual variations. Mouse models provide a useful means to investigate PD-associated molecular changes, in particular those preceding nigro-striatal degeneration. The elucidation of such early changes can shed light into disease causation and drivers of disease progression, in turn pointing to novel targets for intervention as well as biomarkers [22, 58]

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