Abstract

A new serine carboxypeptidase gene, capA, was identified in Aspergillus niger CBS 513.88 by reading genomic information and performing sequence alignment, and the gene was cloned and expressed in Pichia pastoris GS115. In a shake flask, the enzyme activity of the recombinant strain GS115 (pPIC9K-capA) reached 209.3 U mg−1. The optimal temperature and pH for enzyme activity were determined to be 45 °C and 6.0, respectively. After incubation at 40–50 °C or at pH 4.0–8.0 for 1 h, the enzyme retained more than 80% or 60% of its initial activity. The presence of 1–10 mmol L−1 Mg2+ enhanced the activity of CapA, whereas 1–10 mmol L−1 Cu2+, Fe2+, or Co2+, 10 mmol L−1 Mn2+, or 1–10 mmol L−1 phenylmethylsulfonyl fluoride (PMSF) significantly inhibited its activity. CapA had a broad substrate specificity and preferred the hydrophobic amino acids Leu and Lys at the C terminus of proteins, and N-benzyloxycarbonyl-l-phenylalanyl-l-leucine (Cbz-Phe-Leu) was the optimal substrate, for which CapA exhibited Km 0.063 mmol L−1 and kcat/Km 186.35 mmol L−1 s−1. The good thermostability, pH stability and hydrolysis characteristics of CapA provide a solid foundation for application in the food and biotechnology fields.

Highlights

  • A new serine carboxypeptidase gene, capA, was identified in Aspergillus niger CBS 513.88 by reading genomic information and performing sequence alignment, and the gene was cloned and expressed in Pichia pastoris GS115

  • Culture Collection Management Center (CGMCC); E. coli JM109 was obtained from Promega (Madison, WI); P. pastoris GS115 and the pPIC9K plasmid were obtained from Invitrogen (San Diego, CA, USA); all were stored at − 80 °C

  • Sequencing confirmed that CapA had an intact open reading frame (ORF), and the nucleotide sequence was identical to the published sequence (Locus tag: ANI_1_238044) of the A. niger CBS 513.88 genome

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Summary

Introduction

A new serine carboxypeptidase gene, capA, was identified in Aspergillus niger CBS 513.88 by reading genomic information and performing sequence alignment, and the gene was cloned and expressed in Pichia pastoris GS115. Carboxypeptidases from various sources, mainly microbial carboxypeptidases and especially fungal carboxypeptidases, have been subjected to taxonomic ­study[11], and some have been cloned and e­ xpressed[12,13,14] Among these identified carboxypeptidases, two kinds of carboxypeptidases originating from A. niger have been cloned and expressed: CPD-I (PepF) and CPD-II (PepG)[15]. One predicted gene encoding a serine carboxypeptidase was first cloned and expressed in Pichia pastoris, and the enzymatic properties of the recombinant enzyme were systematically analyzed. This research has laid a good foundation for further exploring the application value of this enzyme

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