Abstract

Elastic fixed window scans of incoherent neutron scattering are an established and frequently employed method to study dynamical changes, usually over a broad temperature range or during a process such as a conformational change in the sample. In particular, the apparent mean-squared displacement can be extracted via a model-free analysis based on a solid physical interpretation as an effective amplitude of molecular motions. Here, we provide a new account of elastic and inelastic fixed window scans, defining a generalized mean-squared displacement for all fixed energy transfers. We show that this generalized mean-squared displacement in principle contains all information on the real mean-square displacement accessible in the instrumental time window. The derived formula provides a clear understanding of the effects of instrumental resolution on the apparent mean-squared displacement. Finally, we show that the generalized mean-square displacement can be used as a model-free indicator on confinement effects within the instrumental time window.

Highlights

  • The apparent mean-squared displacement (MSD) u2 app determined from elastic fixed window scans of incoherent neutron scattering have been used to explore dynamical changes as a function of parameters such as temperature, pressure, external fields or reaction time

  • The apparent MSD exploit the general strength of incoherent neutron scattering to explore self-dynamics in confined geometries on molecular length scales

  • In interpretation, a physical picture of the dynamical changes is obtained by considering the apparent MSD as an effective amplitude of motion, which allows relative comparison between different systems as well as connections to simulational studies

Read more

Summary

Introduction

2 app determined from elastic fixed window scans of incoherent neutron scattering have been used to explore dynamical changes as a function of parameters such as temperature, pressure, external fields or reaction time. The apparent MSD exploit the general strength of incoherent neutron scattering to explore self-dynamics in confined geometries on molecular length scales. In practice, it allows a model-free analysis of the scattering intensity at zero energy transfer, where the scattering intensity is maximal. In interpretation, a physical picture of the dynamical changes is obtained by considering the apparent MSD as an effective amplitude of motion, which allows relative comparison between different systems as well as connections to simulational studies. MSD has been explicitly calculated using a dynamical model for the full quasi-elastic spectra, thereby allowing to separate internal from global dynamics during protein denaturation [18, 19]

The generalized mean-squared displacement u2 ω
Explicit evaluation of u2 ω
Energy of zero u2 ω as a model-free indicator of confinement effects
Model-based analysis of elastic and inelastic fixed window scans
Conclusion
Full Text
Paper version not known

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call

Disclaimer: All third-party content on this website/platform is and will remain the property of their respective owners and is provided on "as is" basis without any warranties, express or implied. Use of third-party content does not indicate any affiliation, sponsorship with or endorsement by them. Any references to third-party content is to identify the corresponding services and shall be considered fair use under The CopyrightLaw.