A composite of catalytic Lewis acidic zirconium oxyhydroxides (8 wt%) and a covalent organic framework (COF) was synthesized. X-ray diffraction and infrared (IR) spectroscopy reveal that COF's structure is preserved after loading with zirconium oxyhydroxides. Electron microscopy confirms a homogeneous distribution of nano- to sub-micron-sized zirconium clusters in the COF. 3D X-ray tomography captures the micron-sized channels connecting the well-dispersed zirconium clusters on the COF. The crystalline ZrOx(OH)y@COF's nanostructure was model-optimized via simulated annealing methods. Using 0.8 mol% of the catalyst yielded a turnover number of 100-120 and a turnover frequency of 160-360 h-1 for Knoevenagel condensation in aqueous medium. Additionally, 2.2 mol% of catalyst catalyzes the hydrolysis of dimethyl nitrophenyl phosphate, a simulant of nerve agent Soman, with a conversion rate of 37% in 180min. The hydrolytic detoxification of the live agent Soman is also achieved. Our study unveils COF-stabilized ZrOx(OH)y as a new class of zirconium-based Lewis+ Bronsted-acid catalysts.