The evolution and formation mechanisms of chemical components in surface water can reflect changes in the geological background of a basin and the extent of human interference. The Yangtze River basin is the largest water source area in China, yet its main ion sources and formation mechanisms are not fully understood. This study uses a combination of hydrochemistry, stable isotopes (δ18O, δD), the Craig-Gordon model, and the APCS-MLR model to quantitatively assess the water source replenishment and evaporation intensity of surface water in the Yangtze River. The study reveals the primary ion sources and controlling factors of surface water in the Yangtze River. The results show that the hydrochemical type in the upstream is mainly HCO3−-Ca2+ and Na+-K+, while in the midstream and downstream it is primarily HCO3−-Ca2+ and SO42−-Ca2+. The evolution of hydrochemical types is mainly controlled by rock weathering and human inputs. The surface water sources in the Yangtze River are directly replenished by precipitation, with the evaporation ratio in the upstream (0.66) being higher than in the midstream (0.63) and downstream (0.47). The lc-excess in the upstream (−0.32 ‰) is lower than in the midstream (1.21 ‰) and downstream (−0.27 ‰), indicating more intense evaporation in the upstream. The hydrochemical composition of the Yangtze River surface water mainly comes from geological factors (80.5 %), industrial factors (11.1 %), agricultural factors (6.4 %), and unknown factors (2.0 %). This study enhances the understanding of the chemical composition, water source replenishment, ion sources, and evolution mechanisms of the Yangtze River surface water, providing a basis for maintaining water quality and sustainable development in the Yangtze River basin.