Genodermatoses are dermatologic problems that are usually associated with single gene mutations and that generally exhibit Mendelian patterns of inheritance. Affected cases develop skin lesions at birth or, occasionally, before birth. To date, 2 major genodermatoses with identification of the causative gene mutations have been described in the veterinary literature: congenital ichthyosis and hereditary epidermolysis bullosa. Although many genodermatoses have been described in a variety of mammals, our knowledge of the causative genetic alterations has been extremely limited. Several molecular biology techniques have been developed and utilized to discover gene mutations in genetic disorders. Pedigree analysis is a method to study the inheritance pattern of the mutated genes (autosomal, sex linked, dominant, recessive, codominant). Segregation of gene mutations with disease phenotypes can be statistically analyzed by segregation analysis. For example, segregation ratios in autosomal recessive disorders will be close to 25%, whereas the ratios in autosomal dominant disorders will be approximately 50%. Complete pedigree and segregation analyses can be archived only if the disease phenotypes in patients are well characterized and regarded to be identical among the same group. In genodermatoses, detailed histopathologic and electron microscopic analyses of the skin lesions are generally performed to define the diseases. Identification of causative gene mutations in genetic disorders might be easier if the abnormalities in the diseases are characterized at the protein level (eg, downregulation of laminin a3 protein at the epidermal basement membrane in German Shorthaired Pointers with inherited junctional epidermolysis bullosa). However, if protein abnormalities could not be identified, positional cloning or candidate gene approaches have widely been used to identify causative genes for genetic disorders. Positional cloning is the method to identify causative genes based on their chromosomal location without protein information. This method is advantageous for discovery of causative genes in human genetic disorders but requires extensive work to define the candidate region after screening multiple genetic markers and fine mapping. Discovery of a deletion mutation in the melanophilin gene in cats with diluted hair is a good example: investigators initially screened 483 microsatellite markers in 89 cats with diluted coat color and 158 wild-type cats by whole-genome scan and found significant genetic linkage between color-dilute hair and 1 microsatellite that mapped to a gene locus close to the melanophilin gene. Alternatively, in the candidate gene approach, genes are selected based on the relationship between disease phenotype and known or predicted biological function of the translated product, knowledge of similar spontaneous diseases in other species or mouse models, or the results of linkage analysis. A disadvantage of this method might be to obtain false-positive linkage unless the disease and control groups share similar genetic background. In this issue, Mauldin et al describe a new variant of autosomal recessive congenital ichthyosis (ARCI), a group of congenital keratinization disorders, in American Bulldogs associated with deficiency of ichthyin. Ichthyin is expressed in the stratum granulosum of the epidermis, where it interacts with desmoplakin, desmosomes, and keratins, and it is speculated to be involved in lamellar body transport and formation of the stratum corneum. In this report, the investigators focused on a congenital keratinization disorder with autosomal recessive inheritance initially recognized in a single purebred dog that was suspected to have limited gene pool. Histopathologic and ultrastructural findings in this and other affected cases resembled those reported in humans with ARCI. Therefore, the investigators selected markers within 7 candidate genes that have been reported as causative genes in human ARCI, and they found that the disease was linked to NIPAL4, which encodes ichthyin. Although the investigators could not find a mutation in the open reading frame of NIPAL4, they found insertion of a small interspersed element (SINE) in the upstream region of NIPAL4. A negative effect of the SINE insertion on ichthyin expression was confirmed
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