Whispering gallery mode (WGM) microresonators are widely used because of their high Q factors. However, high Q factors cannot be consistently attained, as WGM cavities continue to be affected by environmental contamination and roughness. To overcome this limitation, the gradient refractive index (GRIN) has been suggested to shifting the mode field inward and preventing total internal reflection at the surface. This study proves the following two results using the simulation and potential functions. First, after ion-exchange, the refractive index fluctuations at the internal mode positions are quite small, even with roughness. As a result, the Q factor is always greater than that before ion-exchange. Second, the GRIN microresonator have a high Q factor (7.5×107) in the external high refractive index (nex=1.5) environment because the GRIN material itself creates a potential barrier, which means that it is significantly more resistant to environmental disturbances than the WGM.