In this study, visible light extinction spectra of different gold nanoparticle assemblies were simulated using boundary element method (BEM) in order to investigate the optical properties of structures which determine the experimentally measured spectra during the self-assembly of the particles. Numerous different optically dominant particle arrangements can evolve depending on the underlying physicochemical mechanism of the clustering process itself: one-dimensional chains, two-dimensional arrays or three-dimensional clusters can be formed in the solutions or at interfaces. Experimentally the aggregation or clustering of gold nanoparticles can be conveniently followed by spectroscopic techniques due to the plasmon coupling related profound effect of particle aggregation on the visible extinction spectrum. However, the measured spectra usually contain the optical response of various aggregate structures. Additionally, small changes of the interparticle distance can have a significant impact on the frequency of the coupled mode. In order to assess the contribution of the different structures to the experimentally measurable extinction spectra during particle clustering, different model structures (chains, array and 3D-cluster) have been simulated, where the distance between the particles was varied as well.
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