Ultrafast infrared frequency selected vibrational echo (FSVE) experiments are used to study temperature-dependent dynamic interactions in liquids, glasses, and proteins. Vibrational echo experiments measure vibrational dephasing. In general, the large bandwidths associated with ultrashort IR pulses will excite multiple vibrational transitions of a molecular system. In addition to the 0- 1 transition of a particular mode of interest, the 1-2 transition, other modes, combination bands, and modes of other species can be excited. A one-dimensional vibrational echo experiment involving multiple transitions can be difficult to address theoretically. By selecting the proper detection wavelengths (a frequency slice through a 2D time-frequency vibrational echo), FSVE makes it possible to effectively isolate a two state system (in terms of the dynamical experimental observables) from within a complex multistate system. First, the FSVE method is used to study the dynamics of CO stretching mode of RuTPPCOPy (TPP = 5,10,15,20-tetraphenylporphyrin, Py = pyridine) in two solvents: poly(methyl methacrylate) (PMMA) and 2-methyltetrahydrofuran (2-MTHF). The results demonstrate the fundamental difference in the influence of a glassy and a liquid solvent on vibrational dephasing. In PMMA, a glass at all temperatures studied, the dephasing rate is linear in temperature. In 2-MTHF, the dephasing is linear for temperatures below Tg, but it changes form, becoming very steep slightly above Tg. Calculations using a model frequency-frequency correlation function (FFCF) show that the different temperature dependences in PMMA and 2-MTHF can be modeled in a unified manner, with at least two solvent motions contributing to the dephasing in liquids, that is, inertial and diffusive motions. FSVE is then applied to the study of the dynamics of the protein myoglobin in water by observing the vibrational dephasing of the stretching mode of CO bound to the active site of myoglobin (Mb-CO). The A 1 and A 3 conformational substates of Mb-CO are found to have different dephasing rates with different temperature dependences. A frequency-frequency correlation function derived from molecular dynamics simulations of Mb-CO at 298 K is used to calculate the vibrational echo decay. The calculated decay shows substantial agreement with the experimentally measured decays. The FSVE experiment probes protein dynamics and provides an observable that can be used to test structural assignments for the Mb-CO conformational substates.
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