ABSTRACT The upflow anaerobic hybrid (UAHB) reactor combines the advantages of a upflow anaerobic sludge blanket (UASB-type) reactor and an anaerobic filter in a single compartment. A novel configuration of the UAHB reactor, composed of two three-phase separators (3PHS), was proposed to evaluate the biogas production in the moving and fixed bed in the treatment of synthetic sewage at a temperature range of 14–21 °C and hydraulic retention time (HRT) of 12, 10 and 8 h. The bench-scale reactor was operated in three different phases with organic loading rate (VOLR) of 0.6 (0.3–0.7), 0.7 ± 0.2, and 1.1 ± 0.1 kg COD m−3 d−1, respectively, for 225 days. The average removal efficiency of chemical oxygen demand (CODt) was 78 (42–89)%, and the total biogas yield was 3090 (1704–4782) mL d−1, with 66% of the lower 3PHS (moving bed) and 34% of the upper 3PHS (fixed bed). However, no significant difference was observed between the biogas yield on the 3PHS (p-value = 0.5048), thus confirming the influence of temperature in the biogas production. The average percentage of methane was 76 (60–82)% for both beds, and the filter media increased the production by 21%. Thus, it can be concluded that the fixed bed suppressed the instability of the moving bed regarding the biogas production and contributed to the final quality of the effluent.