Uncultivated Soil Samples Research Articles

Environmental pollution by heavy metals within the area influenced by the Tungurahua volcano eruption – Ecuador

Volcanic eruptions can have long-lasting negative effects on nearby environments and communities, especially those relying on agriculture. The Tungurahua and Sangay volcanoes in Ecuador’s highlands pose a significant risk to the region’s agricultural economy and inhabitants. The most recent eruption of the Tungurahua volcano spanned from September 1999 to March 2016. Volcanic ash is known to contain both non-essential and essential elements for plant growth, but excessive amounts of the latter can also be toxic and disrupt physiological processes. Additionally, the use of pesticides and fertilizers introduces additional elements to agricultural soils, which can potentially transfer to edible plants and raise health concerns for consumers. Despite this, little is known about the impact of the Tungurahua volcano’s latest eruption on soil deposition of micronutrient and heavy metals and their potential transfer to the food chain. To address this knowledge gap, we conducted a study to explore the impact of the Tungurahua volcano’s latest eruption on soil deposition of Cd, Cr, Ni, Pb, As, Fe, Cu, Mn, and Zn, as well as the physicochemical characteristics of cultivated and uncultivated soil samples and vegetables in the cantons most affected by volcanic ash. According to our findings, the physicochemical properties, micronutrient, and heavy metal concentrations of both cultivated and uncultivated soils differ and, in some cases, exceeded the maximum limits established, which could affect the health of the soil as well as of human beings through the trophic chain. This study provides valuable information for monitoring the chemical and physical properties of soil and vegetables in areas affected by the Tungurahua volcanic activity and agriculture, aiding in understanding their impact on the environment, agriculture, and potential health risks associated with locally grown crops in rural Ecuadorian communities.

Mycorrhizosphere Bacteria, Rahnella sp. HPDA25, Promotes the Growth of Armillaria gallica and Its Parasitic Host Gastrodia elata.

Gastrodia elata is an entirely heterotrophic plant, the growth of which is completely reliant on Armillaria gallica, an orchid mycorrhizal fungus. To avoid damaging ecosystems, G. elata cultivation is shifting from woodland to farmland. However, whether the microbial community structure remains stable during this conversation is unknown. Here, we cultivated G. elata in woodland or farmland and found that woodland-cultivated G. elata produced a greater yield and larger tuber size. The relative abundance of Rahnella was 22.84- and 122.25-fold higher in woodland- and farmland-cultivated soil samples, respectively, than that in uncultivated soil samples. To investigate how Rahnella impacts the growth of G. elata and establishes symbiosis with Armillaria gallica, three Rahnella spp. strains (HPDA25, SBD3, and SBD11) were isolated from mycorrhizosphere soil samples. It was found that these strains, especially HPDA25, promoted the growth of A. gallica. Ultra-performance liquid chromatography coupled to a triple quadrupole mass spectrometry analysis detected the indole-3-acetic acid with 16.24 ng/ml in HPDA25 fermentation solution. Co-culturing with the strain HPDA25 or exogenous indole-3-acetic acid increased the branching and fresh weight of rhizomorphs and the growth rate and extracellular laccase activity of A. gallica, compared with A. gallica cultured alone. The results of RNA-seq and quantitative real-time polymerase chain reaction analysis showed that co-culturing A. gallica with HPDA25 increased the expression level of the genes including hydrophobin, SUR7/PalI family, and pectin methylesterase, whereas decreased the expression levels of glycolysis-related genes. Furthermore, co-culturing with the strain HPDA25, A. gallica promotes the growth of G. elata and enhances the tuber size of G. elata. These results provide new insights into an orchid mycorrhizal symbiosis and the cultivation of G. elata.

Assessment of physiochemical properties and concentration of heavy metals in agricultural soils fertilized with chemical fertilizers

The present study aim to assess the effect of phosphate and urea fertilizers on the physicochemical properties, pH and electrical conductivity (EC) of the soil. The effect of these fertilizers on cation exchange capacity (CEC), organic matter (OM), and the possibility of contamination with heavy metals (HM) (Cr, Cu, Cd, Mn, Zn, Ni, Fe, and Pb) were studied on the soils of Alshati agricultural project at different seasons after forty years of fertilization. Uncultivated soil samples were also analyzed for comparison and considered as reference. Mean values of soil pH, EC, CEC, and OM ranged between 6.88-7.32, 0.14–0.26 μS/cm, 2.95–4.19 Cmol/kg and 0.49–0.53%, respectively, in all seasons. Concentrations of HMs were 9.50–38.38, 0.0–2.05, 0.0–0.47, 0.0–29.81, 0.0–13.85, 2.83–25.95 and 104–512.20 mg/kg respectively, for Cr, Cu, Cd, Mn, Zn, Ni and Fe. The concentrations of the HMs in the soil were found to be vary significantly with the seasons (winter, spring, summer, and autumn). However, no traces of Pb was found in the soil samples. The result showed a significant correlation between, pH, EC, CEC, OM and HM content of the soil. The geochemical index of contamination shows that there was no contamination with Cu, Cd, Zn, Pb, Cr, Mn, Ni, and Fe.

Investigating nitrate retention capacity, elementary and mineral composition of Kalahari sandy soils at Mashare farm in Namibia, Okavango river basin

Kalahari sands which cover a large part of Southern Africa and extend into Central Africa are infertile and marginal soils for intensive agriculture. Therefore, high nitrogen fertilisation rates may degrade ecosystems of rivers with catchments covered by the Kalahari sands. A study on Mashare Farm located in the Okavango River basin showed that irrigated Kalahari sandy soils had a nitrate retention capacity, which enabled the soil to resist nitrate leaching in water saturated conditions. The irrigated soils were modified by agricultural activities; hence this study investigated if uncultivated and cultivated Kalahari sand soils had similar nitrate retention properties. The elementary composition of the soils was investigated for obtaining an insight into chemical properties that may be causing the nitrate retention capacity. A permeameter was used to leach out nitrates from irrigated and uncultivated soil samples, and nitrate concentrations were measured on the leaching effluent from the permeameter. Elemental analysis was done on the cultivated and the uncultivated soil samples using a Scanning Electron Microscope, a portable X-Ray Fluorescence analyzer, and an X-Ray Diffraction machine, and the later was also used for crystalline structure analyses. Sieve analyses confirmed that the Mashare's cultivated and uncultivated topsoils were similar, and both were similar to Botswana Kalahari topsoil. The irrigated and cultivated subsoil had a higher average nitrate retention capacity of 76% compared to 73% for the uncultivated subsoil. Both samples had the same elements, although the proportions were different. Both soil samples were dominated by a quartz mineral, but the field soil had traces of palygorskite. The presence of aluminum and transition metals outside the minerals structure, but as coatings on the quartz sand grains enhanced nitrate retention capacity properties of the Kalahari sand soils.

Evaluation of Environmental Hazards Resulted from Human Activities and Natural Radioactivity in Tuban Delta in Yemen

The knowledge of environmental hazards resulted from natural radioactivity and human activities is very important for monitoring of environmental contamination. In this study, the environmental hazards due to the natural radioactivity and human activities in Tuban delta in Yemen were discussed and evaluated using gamma ray spectroscopy. Thirty soil samples were collected from the study area. The results showed that the mean activity concentrations of 238U series (226Ra), 232Th, and 40K were 16.83 ± 2.3, 24.76 ± 2.3, 646.48 ± 13 Bq kg-1 and 15.22 ± 1.5, 21.99 ± 2.1, 472.58 ± 10 Bq kg-1 for farm soil samples treated with organic and urea fertilizer and farm soil samples treated with urea fertilizer, respectively. The corresponding values were 19.53 ± 1.5, 24.46 ± 3, and 500.76 ± 17 Bq kg-1 for uncultivated soil samples. The activity concentrations of 137Cs showed a significant value in some uncultivated soil samples. Also, physical and chemical properties of some soil samples were discussed and evaluated. A Radiological parameter, an absorbed dose rate in air, and an annual effective dose were calculated and evaluated. The results were compared with those of literature.

Combined effect of the fungicide based on copper sulfate and lead chloride

The present study aim to assess the effect of phosphate and urea fertilizers on the physicochemical properties, pH and electrical conductivity (EC) of the soil. The effect of these fertilizers on cation exchange capacity (CEC), organic matter (OM), and the possibility of contamination with heavy metals (HM) (Cr, Cu, Cd, Mn, Zn, Ni, Fe, and Pb) were studied on the soils of Alshati agricultural project at different seasons after forty years of fertilization. Uncultivated soil samples were also analyzed for comparison and considered as reference. Mean values of soil pH, EC, CEC, and OM ranged between 6.88-7.32, 0.14–0.26 μS/cm, 2.95–4.19 Cmol/kg and 0.49–0.53%, respectively, in all seasons. Concentrations of HMs were 9.50–38.38, 0.0–2.05, 0.0–0.47, 0.0–29.81, 0.0–13.85, 2.83–25.95 and 104–512.20 mg/kg respectively, for Cr, Cu, Cd, Mn, Zn, Ni and Fe. The concentrations of the HMs in the soil were found to be vary significantly with the seasons (winter, spring, summer, and autumn). However, no traces of Pb was found in the soil samples. The result showed a significant correlation between, pH, EC, CEC, OM and HM content of the soil. The geochemical index of contamination shows that there was no contamination with Cu, Cd, Zn, Pb, Cr, Mn, Ni, and Fe.

Genetic analysis reveals diversity and genetic relationship among Trichoderma isolates from potting media, cultivated soil and uncultivated soil.

BackgroundTrichoderma is one of the most common fungi in soil. However, little information is available concerning the diversity of Trichoderma in soil with no previous history of cultivation. This study was conducted to investigate the most common species and the level of genetic relatedness of Trichoderma species from uncultivated soil in relation to cultivated soil and potting media.ResultsA total of 24, 15 and 13 Trichoderma isolates were recovered from 84 potting media samples, 45 cultivated soil samples and 65 uncultivated soil samples, respectively. Analysis based on the internal transcribed spacer region of the ribosomal RNA (rRNA) and the translation elongation factor gene (EF1) indicated the presence of 9 Trichoderma species: T. harzianum (16 isolates), T. asperellum (13), T. citrinoviride (9), T. orientalis (3), T. ghanense (3), T. hamatum (3), T. longibrachiatum (2), T. atroviride (2), and T. viride (1). All species were found to occur in potting media samples, while five Trichoderma species were recovered from the cultivated soils and four from the uncultivated soils. AFLP analysis of the 52 Trichoderma isolates produced 52 genotypes and 993 polymorphic loci. Low to moderate levels of genetic diversity were found within populations of Trichoderma species (H = 0.0780 to 0.2208). Analysis of Molecular Variance indicated the presence of very low levels of genetic differentiation (Fst = 0.0002 to 0.0139) among populations of the same Trichoderma species obtained from the potting media, cultivated soil and uncultivated soil.ConclusionThe study provides evidence for occurrence of Trichoderma isolates in soil with no previous history of cultivation. The lack of genetic differentiation among Trichoderma populations from potting media, cultivated soil and uncultivated soil suggests that some factors could have been responsible for moving Trichoderma propagules among the three substrates. The study reports for the first time the presence of 4 Trichoderma species in Oman: T. asperellum, T. ghanense, T. longibrachiatum and T. orientalis.

Vertical distributions of 137Cs, 40K, 232Th and 226Ra in soil samples from Istanbul and its environs, Turkey

Determining the distribution of natural and artificial radionuclides in soil profiles as well as the surface layer of the soil is necessary due to the fact that radionuclides can enter the food chain from deeper soil layers and also contaminate ground water. In the current study, the activity-depth profiles of (137)Cs were determined in soil samples from 20 sites in and around the city of Istanbul. Naturally occurring radionuclides were determined at 12 of the locations. Uncultivated soil samples were taken in six horizontal layers at each location. Activity concentrations were measured with a gamma spectrometer. The impacts of texture, organic matter and pH of the soil on the vertical distribution of the radionuclides were also studied. The average and standard deviations of (137)Cs and (40)K activity concentrations in soil at a depth of 5 cm were found to be 16.46±14.71 and 450.2±239.1 Bq kg(-1), respectively. The activity concentrations of (40)K, (232)Th and (226)Ra were distributed uniformly with regard to soil depth. The depth distribution of (137)Cs generally fitted a linear function. The study revealed that >20 y after the Chernobyl disaster of 1986, 55 % of (137)Cs still remains in the upper 10 cm of soil in the Istanbul environment.

Effect of heavy metals on soil microbial processes and population

The effect of different toxic heavy metals ions was studied on the CO2 production of microorganisms in uncultivated sandy clay soil. The soils were treated by C, N and P in the form of sodium nitrate, potassium phosphate and glucose respectively. The inhibitions appeared even affecting three weeks, but highly significant effects could be estimated after six-week incubation period. Cobalt ions had smallest effect on decreasing CO2-production in uncultivated soil samples at the different incubation intervals .The strongest inhibition of the gas production was detected by the influence of cadmium ions.

TRACE ELEMENTS DISTRIBUTION IN SOIL IN AREAS OF LIGNITE POWER PLANTS OF WESTERN MACEDONIA

The concentration of 16 trace elements (V, Cr, Mn, Co, Ni, Cu, Mo, As, Cd, Hg, Sn, Se, Sb, Ba, Ag and Pb) has been determined in 39 points distributed over the 2300 km2 of the Kozani-Ptolemaida-Amy...

Study on geochemical association of plutonium in soil using sequential extraction procedure

Three kinds of soil, collected in various places (in northwestern and southeastern Poland and near Chernobyl) were used as a subject of sequential extraction and plutonium distribution study. The modified method of Tessier was applied to separate readily available, carbonate, organic, Fe/Mn oxide and residual fractions. Plutonium isotope activity in soil as well as in particular separated fractions was determined by means of alpha spectrometry. The method of plutonium separation and purification for alpha-spectrometric measurements was modified according to the chemical properties of the extracted fraction. It was found that the major part (about 90%) of 239,240Pu is bound to organic and Fe/Mn oxide fractions (in uncultivated soil samples of northwestern Poland and Chernobyl). In soil samples coming from river valley (southeastern Poland) almost equal amounts of plutonium are distributed between the available, organic and residual fractions.