Two-dimensional Sum Frequency Generation Spectroscopy Research Articles

Lipid Landscapes: Vibrational Spectroscopy for Decoding Membrane Complexity.

Cell membranes are incredibly complex environments containing hundreds of components. Despite substantial advances in the past decade, fundamental questions related to lipid-lipid interactions and heterogeneity persist. This review explores the complexity of lipid membranes, showcasing recent advances in vibrational spectroscopy to characterize the structure, dynamics, and interactions at the membrane interface. We include an overview of modern techniques such as surface-enhanced infrared spectroscopy as a steady-state technique with single-bilayer sensitivity, two-dimensional sum-frequency generation spectroscopy, and two-dimensional infrared spectroscopy to measure time-evolving structures and dynamics with femtosecond time resolution. Furthermore, we discuss the potential of multiscale molecular dynamics (MD) simulations, focusing on recently developed simulation algorithms, which have emerged as a powerful approach to interpret complex spectra. We highlight the ongoing challenges in studying heterogeneous environments in multicomponent membranes via current vibrational spectroscopic techniques and MD simulations. Overall, this review provides an up-to-date comprehensive overview of the powerful combination of vibrational spectroscopy and simulations, which has great potential to illuminate lipid-lipid, lipid-protein, and lipid-water interactions in the intricate conformational landscape of cell membranes. Expected final online publication date for the Annual Review of Physical Chemistry, Volume 75 is April 2024. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.

Distinct Binding of Rhenium Catalysts on Nanostructured and Single-Crystalline TiO2 Surfaces Revealed by Two-Dimensional Sum Frequency Generation Spectroscopy

High surface area TiO2 electrodes are extensively used in photocatalytic solar cells. However, it remains controversial how molecular catalysts interact with the TiO2 surfaces and how the electrodes affect the functionality of catalytic adsorbates. Here, we examine the CO2 reduction catalyst ReI(dcbpy)(CO)3Cl (dcbpy = 4,4′-dicarboxy-2,2′-bipyridine) on TiO2 by probing spectroscopically isolated carbonyl modes that are highly sensitive to the complex electronic structure and solvation environment. Combining interferometric two-dimensional sum frequency generation spectroscopy and ab initio simulations of the spectra, we find distinct spectroscopic and dynamical properties of catalysts bound to single crystals and nanocrystalline surfaces. Different cross-peak patterns resulting from interferences between elements of the fourth-order susceptibility, along with different vibrational relaxation dynamics, reveal distinct vibrational relaxation pathways of the catalysts on different TiO2 surfaces that could be ...

Heterogeneous Amyloid β-Sheet Polymorphs Identified on Hydrogen Bond Promoting Surfaces Using 2D SFG Spectroscopy.

Two-dimensional sum-frequency generation spectroscopy (2D SFG) is used to study the structures of the pentapeptide FGAIL on hydrogen bond promoting surfaces. FGAIL is the most amyloidogenic portion of the human islet amyloid polypeptide (hIAPP or amylin). In the presence of a pure gold surface, FGAIL does not form ordered structures. When the gold is coated with a self-assembled monolayer of mercaptobenzoic acid (MBA), 2D SFG spectra reveal features associated with β-sheets. Also observed are cross peaks between the FGAIL peptides and the carboxylic acid groups of the MBA monolayer, indicating that the peptides are in close contact with the surface headgroups. In the second set of samples, FGAIL peptides chemically ligated to the MBA monolayer also exhibited β-sheet features but with a much simpler spectrum. From simulations of the experiments, we conclude that the hydrogen bond promoting surface catalyzes the formation of both parallel and antiparallel β-sheet structures with several different orientations. When ligated, parallel sheets with only a single orientation are the primary structure. Thus, this hydrogen bond promoting surface creates a heterogeneous distribution of polymorph structures, consistent with a concentration effect that allows nucleation of many different amyloid seeding structures. A single well-defined seed favors one polymorph over the others, showing that the concentrating influence of a membrane can be counterbalanced by factors that favor directed fiber growth. These experiments lay the foundation for the measurement and interpretation of β-sheet structures with heterodyne-detected 2D SFG spectroscopy. The results of this model system suggest that a heterogeneous distribution of polymorphs found in nature are an indication of nonselective amyloid aggregation whereas a narrow distribution of polymorph structures is consistent with a specific protein or lipid interaction that directs fiber growth.

Heterogeneous Amyloid β-Sheet Polymorphs Identified on Hydrogen Bond Promoting Surfaces Using 2D SFG Spectroscopy

Two-dimensional sum-frequency generation spectroscopy (2D SFG) is used to study the structures of the pentapeptide FGAIL on hydrogen bond promoting surfaces. FGAIL is the most amyloidogenic portion of the human islet amyloid polypeptide (hIAPP or amylin). In the presence of a pure gold surface, FGAIL does not form ordered structures. When the gold is coated with a self-assembled monolayer of mercaptobenzoic acid (MBA), 2D SFG spectra reveal features associated with β-sheets. Also observed are cross peaks between the FGAIL peptides and the carboxylic acid groups of the MBA monolayer, indicating that the peptides are in close contact with the surface headgroups. In the second set of samples, FGAIL peptides chemically ligated to the MBA monolayer also exhibited β-sheet features but with a much simpler spectrum. From simulations of the experiments, we conclude that the hydrogen bond promoting surface catalyzes the formation of both parallel and antiparallel β-sheet structures with several different orientations. When ligated, parallel sheets with only a single orientation are the primary structure. Thus, this hydrogen bond promoting surface creates a heterogeneous distribution of polymorph structures, consistent with a concentration effect that allows nucleation of many different amyloid seeding structures. A single well-defined seed favors one polymorph over the others, showing that the concentrating influence of a membrane can be counterbalanced by factors that favor directed fiber growth. These experiments lay the foundation for the measurement and interpretation of β-sheet structures with heterodyne-detected 2D SFG spectroscopy. The results of this model system suggest that a heterogeneous distribution of polymorphs found in nature are an indication of nonselective amyloid aggregation whereas a narrow distribution of polymorph structures is consistent with a specific protein or lipid interaction that directs fiber growth.

Two Types of Water at the Water-Surfactant Interface Revealed by Time-Resolved Vibrational Spectroscopy.

The surfactant sodium dodecyl sulfate (SDS) is widely used as a detergent for both domestic and industrial applications. It forms a self-assembled monolayer on the surface of water. We report a microscopic model for the interaction between the surfactant and water and between water molecules at the interface, revealed using static and time-resolved two-dimensional sum frequency generation spectroscopy. Two distinct subensembles of water in the presence of this negatively charged SDS surfactant have been identified: those close to the SDS headgroup having fairly isolated O-H groups, i.e., localized O-H stretch vibrations, and those whose O-H stretch vibrations are delocalized, i.e., shared between multiple O-H bonds. The two subensembles are coupled, with subpicosecond energy transfer occurring between them. This is markedly different from O-H bonds at the air-water interface, which are less heterogeneous, and indicates that the water molecules that interact with the surfactant headgroups have hydrogen-bonding properties different from those of water molecules interacting with the other water molecules.

Short-Range Catalyst–Surface Interactions Revealed by Heterodyne Two-Dimensional Sum Frequency Generation Spectroscopy

Heterodyne 2D sum frequency generation spectroscopy is used to study a model CO2 reduction catalyst, Re(diCN-bpy) (CO)3Cl, as a monolayer on a gold surface. We show that short-range interactions with the surface can cause substantial line-shape differences between vibrational bands from the same molecules. We explain this interaction as the result of couplings between CO vibrational modes of the catalyst molecules and the image dipoles on gold surface, which are sensitive to the relative distance between the molecule and the surface. Thus, by analysis of HD 2D SFG line-shape differences and polarization dependences of IR spectra, we can unambiguously determine the ensemble-averaged orientation of the molecules on the surface. The high sensitivity of HD 2D SFG spectra to short-range interactions can be applied to many other adsorbate-substrate interactions and therefore can serve as a unique tool to determine adsorbate orientations on surfaces.

Structural Characterization of Single-Stranded DNA Monolayers Using Two-Dimensional Sum Frequency Generation Spectroscopy

DNA-covered materials are important in technological applications such as biosensors and microarrays, but obtaining structural information on surface-bound biomolecules is experimentally challenging. In this paper, we structurally characterize single-stranded DNA monolayers of poly(thymine) from 10 to 25 bases in length with an emerging surface technique called two-dimensional sum frequency generation (2D SFG) spectroscopy. These experiments are carried out by adding a mid-IR pulse shaper to a femtosecond broad-band SFG spectrometer. Cross peaks and 2D line shapes in the 2D SFG spectra provide information about structure and dynamics. Because the 2D SFG spectra are heterodyne detected, the monolayer spectra can be directly compared to 2D infrared (2D IR) spectra of poly(thymine) in solution, which aids interpretation. We simulate the 2D SFG spectra using DFT calculations and an excitonic Hamiltonian that relates the molecular geometry to the vibrational coupling. Intrabase cross peaks help define the orientation of the bases and interbase cross peaks, created by coupling between bases, and resolves features not observed in 1D SFG spectra that constrain the relative geometries of stacked bases. We present a structure for the poly(T) oligomer that is consistent with the 2D SFG data. These experiments provide insight into the DNA monolayer structure and set precedent for studying complex biomolecules on surfaces with 2D SFG spectroscopy.

Simulation of Two-Dimensional Sum-Frequency Generation Response Functions: Application to Amide I in Proteins

We present the implementation of an approach to simulate the two-dimensional sum frequency generation response functions of systems with numerous coupled chromophores using a quantum-classical simulation scheme that was previously applied successfully to simulate two-dimensional infrared spectra. We apply the simulation to the amide I band of a mechanosensitive channel protein. By examining the signal generated from different segments of the protein, we find that the overall signal is impossible to interpret without the aid of simulations due to the interference of the response generated on different segments of the protein. We do not find significant cross-peaks in the spectra, even when the waiting time is increased. The spectra are thus not sensitive to coupling between different structural elements. Despite this, we conclude that two-dimensional sum frequency generation spectroscopy will be a powerful tool to investigate membrane bound proteins.

Investigation of Au electrodeposition from [BMP][TFSA] room-temperature ionic liquid containing K[Au(CN)2] by in situ two-dimensional sum frequency generation spectroscopy

In this paper we report an in situ 2D visible-infrared sum frequency generation (VIS-IR SFG) study of the potentiostatic electrodeposition of gold from a solution containing [Au(CN)2]− in 1-butyl-1-methyl-pyrrolidinium bis(trifluoromethylsulfonyl) amide ([BMP][TFSA]), a room-temperature ionic-liquid (RTIL). We followed the potential-dependent co-adsorption of BMP+ and CN−, released by reduction of the Au(I) complex, in the range –0.8 to −3.0V vs. Au QRE. We found that the pyrrolidinium ring of BMP+ reorients as a function of potential value and interaction mode with coadsorbed CN−. The Stark tuning of CN− shows that this pseudohalide can be adsorbed in two different ways, that can be correlated with the presence of Au(I) reduction intermediates at the dynamic electrodeposition interface.