Evidence of the influence of prenatal phthalate exposure on childhood longitudinal obesity markers is limited. Nested on the Ma’anshan birth cohort study, 990 mother-daughter pairs were included. Seven phthalate metabolites were determined in urine collected in each trimester. Each child underwent a physical examination from birth to 6 years of age twelve times. Latent class growth models were used to identify three trajectories of girls’ body mass index (BMI). Logistic regression, quantile g-computation and Bayesian kernel machine regression models analyzed the relationships of prenatal exposure to individual and mixed phthalates with girls’ body mass index (BMI) trajectory. Compared to the “lowest trajectory” class, prenatal average concentrations of mono(2-ethyl-5-hydroxyhexyl) phthalate (MEHHP, ORcrude = 2.095, 95 % CI = 1.014–4.328) and di(2-ethylhexyl) phthalate (DEHP, ORcrude = 2.336, 95 % CI = 1.022–5.338) during pregnancy were associated with an increased probability of being in the “highest trajectory” class. The average concentration of DEHP (ORcrude = 1.879, 95 % CI = 1.002–3.522) was associated with an increased probability of being in the “moderate trajectory” class. Stratified analyses by trimester of pregnancy mainly showed that third-trimester exposure to monoethyl phthalate (MEP, ORadjusted = 1.584, 95 % CI = 1.094–2.292), mono(2-ethyl-5-oxohexyl) phthalate (MEOHP, ORadjusted = 2.885, 95 % CI = 1.367–6.088), MEHHP (ORadjusted = 2.425, 95 % CI = 1.335–4.407), DEHP (ORadjusted = 2.632, 95 % CI = 1.334–5.193) and high molecular weight phthalate (ORadjusted = 2.437, 95 % CI = 1.239–4.792) was associated with an increased probability of being in the “highest trajectory” class. However, the mixture of phthalates was not significantly related to the girl’s BMI trajectory. In conclusion, in utero exposure to phthalates, including MEP and DEHP metabolites (MEHHP and MEOHP), was significantly associated with early childhood high BMI trajectories in girls. The third trimester of pregnancy seemed to be the window of vulnerability to phthalate exposure for girls’ high BMI trajectory at periods of prenatal development. No evidence supported a significant relationship between combined exposure to phthalate metabolites and girls’ high BMI trajectory.
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