Traits In Tomato Research Articles

Effect of Coloured Plastic Mulches on Yield and Quality of Tomato (Solanum lycopersicum) in Central Himalayan Region

Plastic mulches are used nowadays to significantly increase crop yield due to ease of use, transportation, and storability. The main objective and aim of this investigation is to examine the role of colored plastic mulch on growth, quality, and yield attributing traits of tomato (Solanum lycopersicum) in the central Himalayan region. The field experiment contained mulches in red, black, yellow, silver, and a no mulch control from Oct 2019 to Feb 2020. Red plastic mulch improved growth, yield, and quality attributing characters compared to other mulches and control. Red mulched treatment maintained better soil moisture and better soil temperature (up to 6 °C) compared to control and other colored mulches. The yield of tomatoes ranged from 13.49 to 20.27 kg.m-2 with the maximum under red plastic mulch. A yield increase of 29.72 to 50.25 % was achieved using mulch as compared to control. The plant growth, quality, and flowering attributing traits also exhibited superiority under mulching over control with red mulch showing the best effect. Tomato fruits harvested from red mulch treatment exhibited the highest value of quality parameters such as TSS (5.20 °B), lycopene content (5.59 mg/100g), ascorbic acid content (16.86 mg/100g), and carotenoid content (3.51 mg/g FW).

Assessment of Genetic Diversity and Identification of Superior Donors for Higher Yield, Nutritional and Processing Traits in Tomato through Hierarchical Clustering Analysis

The present investigation was carried out in the Department of Horticulture, BAC, BAU, Sabour, Bihar, with 22 diverse genotypes of tomato germplasms collected from diverse locations and sources. The 22 genotypes were assessed for their phonological, morphological, yield, nutritional and processing quality attributes. The hierarchical clustering analysis based on the Euclidean distance and Ward’s method were applied on these genotypes separately based on two segments namely the morphological and yield attributes; and the nutritional and processing quality attributes, aimed to find superior genotypes from both segments. Further, through the same analysis, the genetic diversity among the 22 genotypes for these traits were also established. Additionally, the association among the plant traits are also partly reported with a heatmap visualization. Our findings suggest that the genotypes 2019/TODVAR-4, 2019/TODVAR-5, 2019/TODVAR-2, 2019/TODVAR-7, and 2019/TOLOCVRES-4 exhibit superior processing quality attributes, compared to the check cultivar Kashi Chayan. In particular, genotypes with higher yields coupled with favorable nutritional and processing qualities significantly enhance the success of breeding programs. Notably, genotype 2019/TODVAR-4 has been identified as particularly suitable for developing cultivars with excellent processing qualities.

Heterosis and Combining Ability Analysis in Tomato Using Line × Tester Model

The experiment entitled Heterosis and combining ability studies for yield and yield attributing trait in Tomato (Lycopersicon esculentum) in Bundelkhand Region was carried out during Rabi 2021-22 and 2022-23 at the Experimental, Organic Research farm Kargunwa ji, Jhansi, Department of Horticultural Sciences, Institute of Agricultural Sciences, Bundelkhand University Jhansi (Uttar Pradesh). The present experiment was design under Randomized block design with three replication with plot size - 3×3m and number of rows per plant – 5 rows per plant accommodating spacing (60×60) cm. All F1s (50) along with parents were raised in RBD in 3 replications and population size were 30 plants per treatment with standard spacing. All 17 parents (5 lines and 12 testers) were raised in separate plots along with a check grown in RBD in three replications to study the combining ability, to estimate the magnitude or percentage of heterosis in the crosses, for identification of the best F1 hybrid and correlation among different traits. Since, Line × tester analysis provides information of potential parents the hybrid line. The three best combinations for line parents viz., H-88-78-5, Kashi Aman, H-88-78-5 and their F1 hybrid viz., H-88-78-1x Kashi Chaya,VRT-67 × Kashi Chaya,H-88-78-5×VRT-50 performed significantly better amongst rest of the other treatment.

A novel tomato interspecific (Solanum lycopersicum var. cerasiforme and Solanum pimpinellifolium) MAGIC population facilitates trait association and candidate gene discovery in untapped exotic germplasm.

We developed a novel eight-way tomato multiparental advanced generation intercross (MAGIC) population to improve the accessibility of tomato relatives genetic resources to geneticists and breeders. The interspecific tomato MAGIC population (ToMAGIC) was obtained by intercrossing four accessions each of Solanum lycopersicum var. cerasiforme and Solanum pimpinellifolium, which are the weedy relative and the ancestor of cultivated tomato, respectively. The eight exotic ToMAGIC founders were selected based on a representation of the genetic diversity and geographical distribution of the two taxa. The resulting MAGIC population comprises 354 lines, which were genotyped using a new 12k tomato single primer enrichment technology panel and yielded 6488 high-quality single-nucleotide polymorphism (SNPs). The genotyping data revealed a high degree of homozygosity, an absence of genetic structure, and a balanced representation of the founder genomes. To evaluate the potential of the ToMAGIC population, a proof of concept was conducted by phenotyping it for fruit size, plant pigmentation, leaf morphology, and earliness. Genome-wide association studies identified strong associations for the studied traits, pinpointing both previously identified and novel candidate genes near or within the linkage disequilibrium blocks. Domesticated alleles for fruit size were recessive and were found, at low frequencies, in wild/ancestral populations. Our findings demonstrate that the newly developed ToMAGIC population is a valuable resource for genetic research in tomato, offering significant potential for identifying new genes that govern key traits in tomato. ToMAGIC lines displaying a pyramiding of traits of interest could have direct applicability for integration into breeding pipelines providing untapped variation for tomato breeding.

Elucidation of Shoot and Root Growth, Physiological Responses, and Quality Traits of Tomato (Solanum lycopersicon L.) Exposed to Elevated Calcium Carbonate Concentrations

The excess presence of calcium carbonate (CaCO3) in soil poses challenges for production of horticultural crops, including tomatoes. This condition is prevalent in arid and semi-arid regions of Afghanistan. The objective of this study was to evaluate the effects of elevated concentrations of CaCO3 on growth, physiology, and quality attributes of tomato. Seedlings were exposed to different concentrations of CaCO3 (0%, 2.5%, 5%, 10%, and 20% w/w) in soil. The results showed that elevated concentrations of CaCO3 (10% and 20%) significantly increased soil electrical conductivity (EC) and pH, and subsequently affected growth, physiology, and quality of tomato. CaCO3 effects resulted in an increase in leaf electrolyte leakage, leaf calcium content, root respiration rate, root ethylene production, fruit firmness, total soluble solids, ascorbic acid, and organic acids, as well as a decrease in plant height, leaf length, leaf magnesium content, leaf SPAD value, number of leaves per plant, root weight and length, and root activity. At higher concentrations, CaCO3 decreased number of flowers and fruit per plant, as well as fruit weight and diameter, consequently affecting yield production. Although elevated concentrations of CaCO3 is characteristic of soils in Afghanistan, limited information is available about this topic. These findings enhance our understanding of soil conditions in the country and provide valuable insights for farmers.

Foliar applications of a Malvaceae-derived protein hydrolysate and its fractions differentially modulate yield and functional traits of tomato under optimal and suboptimal nitrogen application.

Protein hydrolysates (PHs) can enhance plant nitrogen nutrition and improve the quality of vegetables, depending on their bioactive compounds. A tomato greenhouse experiment was conducted under both optimal (14 mM) and suboptimal (2 mM) nitrogen (N-NO3) conditions. Tomatoes were treated with a new Malvaceae-derived PH (MDPH) and its molecular fractions (MDPH1, >10 kDa; MDPH2, 1-10 kDa and MDPH3, <1 kDa). Under optimal N conditions, the plants increased biomass and fruit yield, and showed a higher photosynthetic pigment content in leaves in comparison with suboptimal N, whereas under N-limiting conditions, an increase in dry matter, soluble solid content (SSC) and lycopene, a reduction in firmness, and changes in organic acid and phenolic compounds were observed. With 14 mM N-NO3, MDPH3 stimulated an increase in dry weight and increased yield components and lycopene in the fruit. The MDPH2 fraction also resulted in increased lycopene accumulation in fruit under 14 mM N-NO3. At a low N level, the PH fractions showed distinct effects compared with the whole MDPH and the control, with an increase in biomass for MDPH1 and MDPH2 and a higher pigment content for MDPH3. Regardless of N availability, all the fractions affected fruit quality by increasing SSC, whereas MDPH2 and MDPH3 modified organic acid content and showed a higher concentration of flavonols, lignans, and stilbenes. The molecular weight of the peptides modifies the effect of PHs on plant performance, with different behavior depending on the level of N fertilization, confirming the effectiveness of fractioning processes. © 2024 Society of Chemical Industry.

Mean Performance and Genetic Variability Exploration for Fruit Yield and its Attributing Traits in Tomato (Solanum lycopersicum L.)

The present study was conducted to access the relative performance, genetic variability, genetic advance and heritability in thirty genotypes of tomato crop. The crop was sown under Randomized Block Design (RBD) in three replications at Regional Research Station Karnal, CCS Haryana Agricultural University, during the Autumn Winter season of 2021-22. The observations were recorded for eight parameters pertaining to the fruit yield and its attributing traits in tomato. Statistics from analysis of variance showed substantial differences among the genotypes that unveils the plausible presence of significant genetic variability which could be positively exploited in crop improvement programs. The results obtained in the experiment showed that Pusa Ruby (38 days) was earliest to flower in 50% plants followed by EC-631351 (40 days). Genotype Selection 7 took the least (66) number of days to first picking and genotype Kashi Hemant took the maximum (155 days) number of days to last picking. Genotype EC-615056 recorded the maximum (57.71 g) average fruit weight and genotypes namely EC-631457, EC-631357 and Pusa Early Dwarf observed highest fruit yield per plant. Narrow differences were recorded for the phenotypic and genotypic coefficients of variation for all the characters, which denotes that environment had very little influence in expression of the characters and phenotype truly represents the genotype. High to moderate magnitude of genotypic coefficient of variation and phenotypic coefficient of variation was recorded for almost all the characters in our investigation. Plant characters days to first picking, days to 50% flowering, days to last picking, plant height at harvest recorded high (&gt;70%) magnitude of heritability in broad sense implying least influence of environment over these characters. High heritability coupled with high genetic advance was observed for characters like days to 50% flowering and plant height at harvesting.

Expression of quantitative and qualitative traits in tomato (Solanum lycopersicum L.) under non-chemical growing conditions in the eastern Indian plateau

Expression of quantitative and qualitative traits in tomato (Solanum lycopersicum L.) under non-chemical growing conditions in the eastern Indian plateau

Prediction accuracy of genomic estimated breeding values for fruit traits in cultivated tomato (Solanum lycopersicum L.)

BackgroundGenomic selection (GS) is an efficient breeding strategy to improve quantitative traits. It is necessary to calculate genomic estimated breeding values (GEBVs) for GS. This study investigated the prediction accuracy of GEBVs for five fruit traits including fruit weight, fruit width, fruit height, pericarp thickness, and Brix. Two tomato germplasm collections (TGC1 and TGC2) were used as training populations, consisting of 162 and 191 accessions, respectively.ResultsLarge phenotypic variations for the fruit traits were found in these collections and the 51K Axiom™ SNP array generated confident 31,142 SNPs. Prediction accuracy was evaluated using different cross-validation methods, GS models, and marker sets in three training populations (TGC1, TGC2, and combined). For cross-validation, LOOCV was effective as k-fold across traits and training populations. The parametric (RR-BLUP, Bayes A, and Bayesian LASSO) and non-parametric (RKHS, SVM, and random forest) models showed different prediction accuracies (0.594–0.870) between traits and training populations. Of these, random forest was the best model for fruit weight (0.780–0.835), fruit width (0.791–0.865), and pericarp thickness (0.643–0.866). The effect of marker density was trait-dependent and reached a plateau for each trait with 768−12,288 SNPs. Two additional sets of 192 and 96 SNPs from GWAS revealed higher prediction accuracies for the fruit traits compared to the 31,142 SNPs and eight subsets.ConclusionOur study explored several factors to increase the prediction accuracy of GEBVs for fruit traits in tomato. The results can facilitate development of advanced GS strategies with cost-effective marker sets for improving fruit traits as well as other traits. Consequently, GS will be successfully applied to accelerate the tomato breeding process for developing elite cultivars.

The effect of grafting on vegetative and reproductive traits of tomato

Relevance. Tomato (Solanum lycopersicum L.) is one of the most important vegetables in the world. Every year the number of identified viruses and diseases increases, infection with which causes significant crop losses and significantly worsens the quality of agricultural products, especially in tomatoes. Material and methods. In the present study we compared the growth of the vegetative and reproductive traits of tomato plants ‘Dokia’, ‘TY Red 250’ and ‘Pilabi’ grated onto bacterial wilt (caused by Ralstonia solanacearum) and Fusarium wilt (Fusarium oxysporum) diseases tolerant rootstock “Spider” (Takii seed, Japan). The non-grafted (control - CT) and grafted tomato plants (GR) were transplanted on 4 March of 2021 to the four season (vinyl) greenhouse on substrate perlite (mixture of perlite no. 1 and no. 3) and cultivated until September 20. Results. The results showed that responses of the tomato cultivars to grafting combination was different, where agronomical traits depends on the each cultivar’s features can be ranged. The reduction of the values of stem diameter (SD), leaf length and width (LW), fresh fruit weight (FFW), fruit diameter (FD), fruit pericarp thickness (FPT) and fruit hardness (FH) with aging of plants and rising ambient temperature was detected. However, fruit soluble solids among all cultivars regardless of treatments were slightly increased. The index of fruit yield per truss (FYT) significantly decreased among all cultivars after 10th truss regardless of the treatments when the daily temperature increased from July to August. In grafted tomato ‘TY Red 250’ were identified the highest fruit yield per plants (FYP) than in CT plants, whereas in other tomatoes did not found similar differences between CT and GR plants.

Quantitative Trait Loci Mapping for Bacterial Wilt Resistance and Plant Height in Tomatoes.

Bacterial wilt (BW) of tomatoes, caused by Ralstonia solanacearum, is a devastating disease that results in large annual yield losses worldwide. Management of BW of tomatoes is difficult due to the soil-borne nature of the pathogen. One of the best ways to mitigate the losses is through breeding for disease resistance. Moreover, plant height (PH) is a crucial element related to plant architecture, which determines nutrient management and mechanical harvesting in tomatoes. An intraspecific F2 segregating population (NC 11212) of tomatoes was developed by crossing NC 84173 (tall, BW susceptible) × CLN1466EA (short, BW resistant). We performed quantitative trait loci (QTL) mapping using single nucleotide polymorphic (SNP) markers and the NC 11212 F2 segregating population. The QTL analysis for BW resistance revealed a total of three QTLs on chromosomes 1, 2, and 3, explaining phenotypic variation (R2) ranging from 3.6% to 14.9%, whereas the QTL analysis for PH also detected three QTLs on chromosomes 1, 8, and 11, explaining R2 ranging from 7.1% to 11%. This work thus provides information to improve BW resistance and plant architecture-related traits in tomatoes.

Physiological and agronomical traits effects of titanium dioxide nanoparticles in seedlings of Solanum lycopersicum L

BackgroundTitanium dioxide nanoparticles (TiO2 NPs) have been reported to have contrasting effects on plant physiology, while their effects on sugar, protein, and amino acid metabolism are poorly understood. In this work, we evaluated the effects of TiO2 NPs on physiological and agronomical traits of tomato (Solanum lycopersicum L.) seedlings. Tomato seeds were treated with TiO2 NPs (1000 and 2000 mg L− 1), TiO2 microparticles (µPs, 2000 mg L− 1) as the size control, and ultrapure water as negative control.ResultsThe dry matter of stems (DMs), leaves (DMl) and total dry matter (DMt) decreased as particle concentration increased. This trend was also observed in the maximum quantum yield of light-adapted photosystem II (PSII) (Fv´/Fm´), the effective quantum yield of PSII (ΦPSII), and net photosynthesis (Pn). The concentrations of sugars, total soluble proteins, and total free amino acids were unaffected, but there were differences in the daily dynamics of these compounds among the treatments.ConclusionOur results suggest that treating tomato seeds with TiO2 might affect PSII performance, net photosynthesis and decrease biomass production, associated with a concentration- and size-related effect of TiO2 particles.

Genome-Wide Association Study (GWAS) for Identifying SNPs and Genes Related to Phosphate-Induced Phenotypic Traits in Tomato (Solanum lycopersicum L.)

Phosphate (P) is a crucial macronutrient for normal plant growth and development. The P availability in soils is a limitation factor, and understanding genetic factors playing roles in plant adaptation for improving P uptake is of great biological importance. Genome-wide association studies (GWAS) have become indispensable tools in unraveling the genetic basis of complex traits in various plant species. In this study, a comprehensive GWAS was conducted on diverse tomato (Solanum lycopersicum L.) accessions grown under normal and low P conditions for two weeks. Plant traits such as shoot height, primary root length, plant biomass, shoot inorganic content (SiP), and root inorganic content (RiP) were measured. Among several models of GWAS tested, the Bayesian-information and linkage disequilibrium iteratively nested keyway (BLINK) models were used for the identification of single nucleotide polymorphisms (SNPs). Among all the traits analyzed, significantly associated SNPs were recorded for PB, i.e., 1 SNP (SSL4.0CH10_49261145) under control P, SiP, i.e., 1 SNP (SSL4.0CH08_58433186) under control P and 1 SNP (SSL4.0CH08_51271168) under low P and RiP i.e., 2 SNPs (SSL4.0CH04_37267952 and SSL4.0CH09_4609062) under control P and 1 SNP (SSL4.0CH09_3930922) under low P condition. The identified SNPs served as genetic markers pinpointing regions of the tomato genome linked to P-responsive traits. The novel candidate genes associated with the identified SNPs were further analyzed for their protein-protein interactions using STRING. The study provided novel candidate genes, viz. Solyc10g050370 for PB under control, Solyc08g062490, and Solyc08g062500 for SiP and Solyc09g010450, Solyc09g010460, Solyc09g010690, and Solyc09g010710 for RiP under low P condition. These findings offer a glimpse into the genetic diversity of tomato accessions’ responses to P uptake, highlighting the potential for tailored breeding programs to develop P-efficient tomato varieties that could adapt to varying soil conditions, making them crucial for sustainable agriculture and addressing global challenges, such as soil depletion and food security.

Yield and Quality Traits of Tomato ‘San Marzano’ Type as Affected by Photo-Selective Low-Density Polyethylene Mulching

The aim of the present study is to investigate the effect of differently colored low-density polyethylene mulching films (black, silver/brown, and yellow/brown) in comparison with bare soil (BS) on soil temperatures, yield and yield components (number of fruit and average fruit weight), and fruit quality traits (color, firmness, total soluble solids content, polyphenols, flavonoids, ascorbic acid, carotenoids, and antioxidant activity) of a ‘San Marzano’ tomato crop grown in Southern Italy over two years (2014 and 2015). The warmer season (2015) shortened the cropping cycle (124 vs. 178 days, 2015 vs. 2014), thereby accelerating fruit ripening and improving firmness and redness (on average, the color parameter a/b was greater than in 2014). It determined the best yield response (53 vs. 44 Mg ha−1) by increasing the number of commercial fruits per unit land area despite the lower average fresh weight (AFW) than the first year. Regardless of the different plastic films, in both years, soil heat storage produced by mulching improved yield as compared to BS and showed a positive and significant effect on the contents of total soluble solids, polyphenols, flavonoids, and carotenoids without affecting the antioxidant activity. The highest values of quality traits were reached in the second year with silver and yellow mulches. Therefore, since the colored mulching films (yellow and silver) had a contradictory effect on yield and quality in the two years, further investigation is desirable.

The SlGRAS9-SlZHD17 transcriptional cascade regulates chlorophyll and carbohydrate metabolism contributing to fruit quality traits in tomato.

Some essential components of fleshy fruits are dependent on photosynthetic activity and carbohydrate metabolism. Nevertheless, the regulatory mechanisms linking chlorophyll and carbohydrate metabolism remain partially understood. Here, we uncovered the role of SlGRAS9 and SlZHD17 transcription factors in controlling chlorophyll and carbohydrate accumulation in tomato fruit. Knockout or knockdown of SlGRAS9 or SlZHD17 resulted in marked increase in chlorophyll content, reprogrammed chloroplast biogenesis and enhanced accumulation of starch and soluble sugars. Combined genome-wide transcriptomic profiling and promoter-binding experiments unveiled a complex mechanism in which the SlGRAS9/SlZHD17 regulatory module modulates the expression of chloroplast and sugar metabolism either via a sequential transcriptional cascade or through binding of both TFs to the same gene promoters, or, alternatively, via parallel pathways where each of the TFs act on different target genes. For instance, the regulation of SlAGPaseS1 and SlSUS1 is mediated by SlZHD17 whereas that of SlVI and SlGLK1 occurs only through SlGRAS9 without the intervention of SlZHD17. Both SlGRAS9 and SlZHD17 can also directly bind the promoter of SlPOR-B to regulate its expression. Taken together, our findings uncover two important regulators acting synergistically to manipulate chlorophyll and carbohydrate accumulation and provide new potential breeding targets for improving fruit quality in fleshy fruits.

Heritability Studies in Tomato (Lycopersicon esculentum L.) Genotypes

Genetic variability, heritability, and genetic advance for fruit yield and quality traits in tomato (Solanum lycopersicum L.) were examined at Main Vegetable Research Station (MVRS) of Anand Agricultural University, Anand, for the kharif-rabi season of 2022-23. The experimental material is made-up of six families developed for generation mean analysis from nine diverse parents viz., 2012/TODVAR-1, AVTOV 1007, GAT-5, 2015/TOLCV RES-1, 2014/TOOV-10, 2016/TOV-10, 2017/TOLV-4, and 2015/2016/TOLCV RES-4. The results show that family I, II, III, and family V exhibited higher values of broad sense heritability with higher genetic advance, was a positive indication of presence of additive gene action and suggests selection methods for improvement of this trait via selection procedures. Higher values of genetic advance were reported highest for lycopene content (452.67 %) for family I and (212.85 %) for family III, 1000 seed weight for family V. This study suggests that improvement of yield and associated traits in L. esculentum should be focused on character basis and requirement of breeding programs.

Evaluation of advanced breeding lines of tomato for fruit quality based on morphophysiological and biochemical traits

Tomato is one of the most important vegetable crops in the world considering its production potential and consumption rate. It serves as an essential source of important nutrients like vitamins C and K, antioxidants, and lycopene, contributing to a balanced and healthy diet. The fruit yield and other yield contributing traits in tomatoes are governed by polygenes and are quantitatively inherited akin to other crops. A study was conducted on tomato (Solanum lycopersicum L.) during Kharif 2020 at the Zonal Agricultural Horticultural Research Station, KSNUAHS, Shivamogga, to assess genetic variability and diversity and to identify superior segregants for shelf life and yield among 40 advanced breeding lines derived from a cross between Red Ball (More shelf life) × Arka Abha (High yield). Out of 16 characters studied, lycopene content, shelf life, pericarp thickness, pulp content, fruit weight, and five other yield contributing traits were positively skewed and were platykurtic, indicating the complementary form of epistasis. A relatively high range of PCV and GCV were observed for almost all the traits considered under study. The lines were clustered into 9 classes based on genetic divergence analysis. Two superior lines, G-32 and G-29 were selected for higher yield and increased shelf life.

Genome editing of DWARF and SELF-PRUNING rapidly confers traits suitable for plant factories while retaining useful traits in tomato.

Plant factories with artificial light are less affected than open-air areas to environmental factors in crop cultivation and are attracting attention as one of the solutions to the world's food problems. However, the cost of cultivation in plant factories is higher than open-air cultivation, and currently, profitable factory-grown crop varieties are limited to those that are small or have a short growing period. Tomatoes are one of the main crops consumed around the world, but due to their large plant height and width, they are not yet suitable for mass production in plant factories. In this study, the DWARF (D) and SELF-PRUNING (SP) genes of the GABA hyperaccumulating tomato variety #87-17 were genome-edited by the CRISPR-Cas9 method to produce dwarf tomato plants. The desired traits were obtained in the T1 genome-edited generation, and the fruit traits were almost the same as those of the original variety. On the other hand, the F2 cross between #87-17 and Micro-Tom containing the d and sp mutations was dwarfed, but the fruit phenotype was a mixture of the traits of the two varieties. This indicates that genome editing of these two genes using CRISPR-Cas9 can efficiently impart traits suitable for plant factory cultivation while retaining the useful traits of the original cultivar.

Impact of different zinc concentrations on growth, yield, fruit quality, and nutrient acquisition traits of tomato (Lycopersicon esculentum L.) grown under salinity stress

Salinity stress affects plant growth, development, nutrient uptake, and yield. Applications of micronutrients, specifically zinc (Zn), can mitigate the harmful consequences of salt stress. During the winter season of 2022, an experiment was conducted in the net house of BINA substation Satkhira, Bangladesh, to examine the impact of different Zn concentrations (5 and 10 kg ha-1) on tomato (Lycopersicon esculentum L.) growth, yield, fruit quality, and nutrient acquisition abilities under different salt stress (SS) conditions (SS0.5%, SS1.0%, and SS1.5% NaCl). The result of the study showed that different stress conditions lowered the plant height, the number of branches per plant, flower clusters, and fruits per plant, plant yield, vitamin C, protein and lycopene contents, and the acquisition of different nutrients, i.e., nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), zinc (Zn) and iron (Fe). The application of 10 kg Zn ha-1 (Zn10) increased all previously mentioned parameters in both saline and usual conditions. On the other hand, a decrease in the amount of Na in fruit was observed when Zn application was increased from 5 to 10 kg ha-1. Plant Na/K ratios were consequently lowest at the highest Zn concentration. Therefore, the findings indicate that Zn application improves tomato growth, yield, fruit quality, and nutrient acquisition traits by mitigating the negative impacts of saline environments.

RNA virus-mediated gene editing for tomato trait breeding.

Virus-induced genome editing (VIGE) leverages viral vectors to deliver CRISPR-Cas components into plants for robust and flexible trait engineering. We describe here a VIGE approach applying an RNA viral vector based on potato virus X (PVX) for genome editing of tomato, a mayor horticultural crop. Viral delivery of single-guide RNA into Cas9-expressing lines resulted in efficient somatic editing with indel frequencies up to 58%. By proof-of-concept VIGE of PHYTOENE DESATURASE (PDS) and plant regeneration from edited somatic tissue, we recovered loss-of-function pds mutant progeny displaying an albino phenotype. VIGE of STAYGREEN 1 (SGR1), a gene involved in fruit color variation, generated sgr1 mutant lines with recolored red-brown fruits and high chlorophyll levels. The obtained editing events were heritable, overall confirming the successful breeding of fruit color. Altogether, our VIGE approach offers great potential for accelerated functional genomics of tomato variation, as well as for precision breeding of novel tomato traits.