Three-membered Ring Research Articles

Theoretical Study of the Isotope Effect in Optical Rotation.

In this work, the isotope effect in optical rotation (OR) is examined by exploring structure-property relationships for H → D substitutions in chiral molecules. While electronic effects serve as the dominant source of optical activity, there is a non-negligible contribution from nuclear vibrations, which changes with isotopic substitution. We employ a test set of 50 small organic molecules: three-membered rings with varying heteroatoms (PCl, PH, S, NCl, NH, O, and NBr) and functional groups (Me, F), and simulations were run at the B3LYP/aug-cc-pVDZ level of theory. The objectives of this work are to determine locations of isotopic substitution that result in significant changes in the vibrational correction to the OR and to evaluate which vibrational modes and electronic response are the major contributors to the isotope effect. Molecules with more polarizable heteroatoms in the ring (e.g., S and P) have the largest change in the vibrational correction compared to the unsubstituted parent molecules. In many cases, isotopic substitution made to the hydrogens on the opposite side of the ring from the functional group provides the largest change in the OR. H/D wagging modes and C vibrations (for D-C centers) are the largest contributors to the isotope effect. This is explained with a molecular orbital decomposition analysis of the OR. The relevant vibrational modes affect the orbital transitions that are already significant at the equilibrium geometry. However, this effect is only large when polarizable heteroatoms are involved because the electron density surrounding them is diffuse enough to feel the subtle effect of change in mass due to isotopic substitution on the relevant vibrational modes.

Silicon Analogues of Cyclopropyl Radical Derived from a Highly Stable Cyclic Disilene Compound Featuring a Si-Br Bond.

A halogen-substituted cyclic disilene compound, bromocyclotrisilene, Si3Br(Eind)3 (3a), bearing fused-ring bulky Eind (a: R1 = R2 = Et) groups, has been synthesized as an extraordinarily air-stable compound by the reduction of 1,2-dibromodisilene, (Eind)BrSi═SiBr(Eind) (2a), or tribromosilane, (Eind)SiBr3 (1a), with the Mg or Li metal. The X-ray diffraction analysis of 3a showed that the disilene moiety has an almost planar, but slightly trans-bent structure. Even though 3a is quite air-stable both in solutions and in the solid state, its Si-Br bond is reactive under reducing conditions. The further treatment of 3a with the Li metal leads to the formation of room-temperature thermally stable silicon homologues of the cyclopropyl radical, i.e., the cyclotrisilanyl radicals (6a) [6a(syn) and 6a(anti)], via intramolecular C-H bond activation in a transient silicon homologue of the cyclopropenyl radical, i.e., the cyclotrisilenyl radical, [Si3(Eind)3]• (5a). The formation mechanism of 6a from 5a is discussed based on the theoretical calculations. The unique structural and electronic properties of these Si3 three-membered ring species incorporating the Eind groups have been experimentally and theoretically investigated.

Synthesis, Identification, and Docking Study of Novel Derivatives of Aziridine

Aziridines are three-membered ring heterocycles that include nitrogen and are well-known for their employment as reactive intermediates in the production of chiral amino alcohols, azomethine ylides, and derivatives of amino acids. The current study was based on the synthesis, identification, docking study and evaluation of antioxidant potential of novel derivatives of aziridine. The novel derivatives of aziridine were synthesized and identified the synthesized aziridine derivatives based on physicochemical properties i.e., boiling point, Rf value, FTIR, NMR and Mass spectroscopy and Docking study. With a binding energy of -6 to -9 Kcal/mol, every chemical has demonstrated effective docking inside the antioxidant activity protein's active region. We contrasted the anticipated docking data with proteins known to have antioxidant action. In results, the % yield was observed as 48.24, 49.72, 48.39 and 49.12 in compound A4, A7, A10 and A12, respectively. Highest Rf values were observed in A3, A5, A7 and A 11 as 0.74, 0.76, 0.77, and 0.74, respectively. A4 showed boiling point 210ºC. Based on docking study, all the compounds were found active, however compound A1, and A4 were demonstrated the highest binding energy (affinity). Derivatives of aziridine A2, A3, A5, A6, A8, A9, A10, A11, A12 were found also found active with some moderate binding affinity. It concluded that 12 novel derivatives of aziridine were synthesized and characterized with their physicochemical properties and spectral analysis (NMR, Mass, FTIR). In docking study, compounds A1 and A4 demonstrated the highest binding affinity among all 12 aziridine derivatives. Thus, active aziridine derivatives might be used in the evaluation of the biological potential. It suggests to perform the acute oral toxicity of the synthesized aziridine derivatives and antioxidant activity.

Beyond Strain Release: Delocalization-Enabled Organic Reactivity.

The release of strain energy is a fundamental driving force for organic reactions. However, absolute strain energy alone is an insufficient predictor of reactivity, evidenced by the similar ring strain but disparate reactivity of cyclopropanes and cyclobutanes. In this work, we demonstrate that electronic delocalization is a key factor that operates alongside strain release to boost, or even dominate, reactivity. This delocalization principle extends across a wide range of molecules containing three-membered rings such as epoxides, aziridines, and propellanes and also applies to strain-driven cycloaddition reactions. Our findings lead to a "rule of thumb" for the accurate prediction of activation barriers in such systems, which can be easily applied to reactions involving many of the strained building blocks commonly encountered in organic synthesis, medicinal chemistry, polymer science, and bioconjugation. Given the significance of electronic delocalization in organic chemistry, for example in aromatic π-systems and hyperconjugation, we anticipate that this concept will serve as a versatile tool to understand and predict organic reactivity.

How Do the Position and Number of Methyl Substituents Affect the Photochemical Process of Criegee Intermediate? Trajectory Surface-Hopping Dynamics of Four-Carbon CIs.

Electronic-structure calculations combined with nonadiabatic trajectory surface-hopping (TSH) dynamic simulations were carried out on two alkenyl-substituted Criegee intermediates (CIs), i.e., propenyl-substituted CI (PCI) and 1-methyl-propenyl substituted CI (MPCI), in order to investigate the influence of the position and number of substituents on the photochemical process of CI in S1 states. It is found that they play critical roles in the reactivity, dominant product channel, and mechanism of the CIs. More specifically, introducing a methyl group on either C1 (α-C) or C3 (γ-C) position of a vinyl-substituted CI (VCI) skeleton facilitates the rotation of the C1═O1 bond and leads to the formation of a three-membered dioxirane ring; meanwhile, it evidently enhances the reactively of the S1-state molecule. Meanwhile, methyl substitution on the vinyl moiety [i.e., C2 (β-C) and C3 (γ-C) positions] is beneficial for the rotation of the C2═C3 bond and thus facilitates the formation of the five-membered 1,2-dioxole ring, and the substitution on C2 site decreases the reactivity. The cosubstitution of C2 and C3 atoms by methyl groups well balances the features of VCI in the sense of high reactivity, consistently predominant channel, and possible dioxole side-product. The findings here not only deepen the knowledge on the photochemical processes of the CI but also inspire the rethinking of the "old" concept of substitution effect.

Regio- and stereoselective access to highly substituted vinylphosphine oxides via metal-free electrophilic phosphonoiodination of alkynes

In general, the P-centered ring-opening of quaternary phosphirenium salts (QPrS) predominantly leads to hydrophosphorylated products, while the C-centered ring-opening is primarily confined to intramolecular nucleophilic reactions, resulting in the formation of phosphorus-containing cyclization products instead of difunctionalized products generated through intermolecular nucleophilic processes. Here, through the promotion of ring-opening of three-member rings by iodine anions and the quenching of electronegative carbon atoms by iodine cations, we successfully synthesize β-functionalized vinylphosphine oxides by the P-addition of QPrS intermediates generated in situ. Multiple β-iodo-substituted vinylphosphine oxides can be obtained with exceptional regio- and stereo-selectivity by reacting secondary phosphine oxides with unactivated alkynes. In addition, a variety of β-functionalized vinylphosphine oxides converted from C-I bonds, especially the rapid construction of benzo[b]phospholes oxides, demonstrates the significance of this strategy.

Synthesis of Methylated, Hydroxylated, and Aminated Metallaaromatics via Ring-Opening Reactions of the Fused Three-Membered Ring Units

Synthesis of Methylated, Hydroxylated, and Aminated Metallaaromatics <i>via</i> Ring-Opening Reactions of the Fused Three-Membered Ring Units

Theoretical study on the insertion reaction of the stannylenoid H2SnLiF with X-H bonds (X = N, O, F).

The insertion reactions of p-complex (RP) and three-membered ring configuration (RS) of stannylenoid H2SnLiF with NH3, H2O and HF have been studied theoretically by quantum chemical calculation. The structures of reactants, precursors, transition states, intermediates and products have been fully optimized at the M06-2X/def2-TZVP level. The single point energy of all fixed points were calculated using the QCISD method. The calculation results show that the three-membered ring configuration is easier to conduct the insertion reaction. Comparing the reaction energy barriers of RP, RS to NH3, H2O and HF, we found that the difficulty of the insertion reaction is NH3 > H2O > HF. The solvent corrected calculation results show that in THF, the reaction energy barrier of RP is lower than that in vacuum, while the reaction energy barrier of RS is higher. This work provides theoretical support for the reaction properties of stannylenoid.

Molecular-strain induced phosphinidene reactivity of a phosphanorcaradiene

Phosphanorcaradienes are an appealing class of phosphorus compounds that can serve as synthons of transient phosphinidenes. However, the synthesis of such species is a formidable task owing to their intrinsic high reactivity. Herein we report straightforward synthesis, characterization and reactivity studies of a phosphanorcaradiene, in which one of the benzene rings in the flanking fluorenyl substituents is intramolecularly dearomatized through attachment to the phosphorus atom. It is facilely obtained by the reduction of phosphorus(III) dichloride precursor with potassium graphite. Despite being thermally robust, it acts as a synthetic equivalent of a transient phosphinidene. It reacts with trimethylphosphine and isonitrile to yield phosphanylidene-phosphorane and 1-phospha-3-azaallene, respectively. When it is treated with one and two molar equivalents of azide, iminophosphane and bis(imino)phosphane are isolated, respectively. Moreover, it is capable of activating ethylene and alkyne to afford [1 + 2] cycloaddition products, as well as oxidative cleavage of Si–H and N–H bonds to yield secondary phosphines. All the reactions proceed smoothly at room temperature without the presence of transition metals. The driving force for these reactions is most likely the high ring-constraint of the three-membered PC2 ring and recovery of the aromaticity of the benzene ring.

Laser absorption measurements of H2O and CO2 time-histories in cyclopropane/O2/argon mixtures at high temperature behind reflected shock waves

As the simplest cycloalkane, cyclopropane is a highly strained three-membered ring hydrocarbon that exhibits high reactivity. In this work, H2O and CO2 time-histories for cyclopropane/O2/argon mixtures at high temperature have been measured behind reflected shock waves in a shock tube using laser absorption spectroscopy. Experiments were conducted at pressures around 2 atm, temperatures ranging from approximately 1500 to 1770 K, and equivalence ratios of 0.5, 1.0, and 2.0. H2O and CO2 were monitored using IR diode laser absorption at 2550.96 nm and 4191.51 nm, respectively, with a fixed-wavelength method. The measured H2O and CO2 time-histories provide new and stringent kinetic targets to validate and refine kinetic mechanisms for cyclopropane. The experimental results have been compared with the predictions of two recently developed combustion mechanisms to validate the performance of mechanisms. Rate-of-production and sensitivity analyses for the measured species have been carried out to identify the key reactions that affect the measured species profiles. Modifications to the rates of selected key reactions have been proposed, which can significantly improve the mechanism predictions. To the best of the authors’ knowledge, this study provides the first species time-history measurements in shock tubes for cyclopropane combustion.

Acridine-Isoxazole and Acridine-Azirine Hybrids: Synthesis, Photochemical Transformations in the UV/Visible Radiation Boundary Region, and Anticancer Activity.

Easy-to-handle N-hydroxyacridinecarbimidoyl chloride hydrochlorides were synthesized as convenient nitrile oxide precursors in the preparation of 3-(acridin-9/2-yl)isoxazole derivatives via 1,3-dipolar cycloaddition with terminal alkynes, 1,1-dichloroethene, and acrylonitrile. Azirines with an acridin-9/2-yl substituent attached directly or via the 1,2,3-triazole linker to the azirine C2 were also synthesized. The three-membered rings of the acridine-azirine hybrids were found to be resistant to irradiation in the UV/visible boundary region, despite their long-wave absorption at 320-420 nm, indicating that the acridine moiety cannot be used as an antenna to transfer light energy to generate nitrile ylides from azirines for photoclick cycloaddition. The acridine-isoxazole hybrids linked at the C9-C3 or C2-C3 atoms under blue light irradiation underwent the addition of such hydrogen donor solvents, such as, toluene, o-xylene, mesitylene, 4-chlorotoluene, THF, 1,4-dioxane, or methyl tert-butyl ether (MTBE), to the acridine system to give the corresponding 9-substituted acridanes in good yields. The synthesized acridine-azirine, acridine-isoxazole, and acridane-isoxazole hybrids exhibited cytotoxicity toward both all tested cancer cell lines (HCT 116, MCF7, and A704) and normal cells (WI-26 VA4).

Biotransformation of Patchouli Alcohol by Cladosporium cladosporioides and the Anti-Influenza Virus Activities of Biotransformation Products.

The biotransformation of patchouli alcohol by Cladosporium cladosporioides afforded 31 products, including 21 new ones (1-3, 5, 6, 8-14, and 17-25). Their structures were determined by extensive spectroscopic data analysis (1H and 13C NMR, HSQC, HMBC, 1H-1H COSY, ROESY, and HRESIMS), and the absolute configuration of compounds 1, 2, 8, 9, and 17 was determined by single-crystal X-ray diffraction using Cu Kα radiation. Structurally, compounds 21-24 were patchoulol-type norsesquiterpenoids without Me-12. Among them, a Δ3(4) double bond existed in compounds 21 and 22; a three-membered ring was formed between C-4, C-5, and C-6 in compound 23; an epoxy moiety appeared between C-3 and C-4 in compound 24. Furthermore, the biotransformation products 9, 10, 12, and 25 showed potent anti-influenza virus activity with EC50 values of 2.11, 7.94, 20.87, and 3.45 μM, respectively.

A Study on the Biological Activity of Optically Pure Aziridine Phosphines and Phosphine Oxides.

A series of optically pure aziridine phosphines and their corresponding phosphine oxides were synthesized through established chemical methodologies. The compounds were systematically investigated for their biological properties. Notably, all synthesized compounds demonstrated moderate antibacterial activity only against the reference strain of Staphylococcus aureus. However, compounds 5 and 7 exhibited noteworthy cell viability inhibition of human cervical epithelioid carcinoma HeLa cells and endometrial adenocarcinoma Ishikawa cells. Further studies of these compounds revealed additional biological effects, including disruption of the cell membrane in high concentrations, cell cycle arrest in the S phase, and the induction of reactive oxygen species (ROS). Comparative analysis of the two classes of chiral organophosphorus derivatives of aziridines indicated that chiral phosphine oxides displayed significantly higher biological activity. Consequently, these findings suggest that chiral phosphine oxides may be potential candidates for the development of anticancer drugs. In light of the significant interest in preparations whose structure is based on a three-membered aziridine ring in terms of potential anticancer therapy, this research fits into the current research trend and should constitute a valuable addition to the current state of knowledge and the existing library of aziridine derivatives with anticancer properties.

Atomic-scale insight into arc plasma radiation-induced gassing materials ablation: photothermal decomposition behavior

In this study, we present a novel computational atomistic study of the photothermal decomposition behavior of arc plasma on radiation-induced gassing materials ablation, studying a polyamide 66 (PA66) system using reactive force field (ReaxFF) molecular dynamics (MD). We determine the infrared (IR) vibrational frequency of the PA66 permanent molecular dipole using MD and then computationally impose an electric field at the same frequency to simulate photothermal decomposition by IR, verifying our observations with gas chromatography-mass spectrometry (GCMS) of experimental decomposition. MD indicates that photothermal decomposition reaction is dominated by either cleavage at low temperature or cyclization at high temperature. At low temperature, initial chain scission takes place at the two amide C–N, and the remaining chains break down into a variety of molecular fragments and free radicals. Further increasing the temperature stabilizes a variety of branched chain structures via cyclization, debranching and polymerization, with further cleavage forming hydrocarbons and volatile small molecule gases. Overall, H2, CO, H2O, alkanes and alkenes are the main gaseous products and cyclic structures (especially nitrogen-containing three-membered ring) are the main solid products during the photothermal decomposition of PA66, and their formation results from a variety of complex chemical reactions. The results of MD cover the experimental observations of GCMS, demonstrating that this computational methodology helps us understand the molecular breakdown mechanisms of arc plasma radiation-induced gassing materials. We also discuss the physical mechanism by which the main gas can accelerate arc quenching, and the importance and necessity of using electric fields to simulate IR photothermal decomposition of arc-induced ablation.

Monitoring the Evolution of Relative Product Populations at Early Times during a Photochemical Reaction.

Identifying multiple rival reaction products and transient species formed during ultrafast photochemical reactions and determining their time-evolving relative populations are key steps toward understanding and predicting photochemical outcomes. Yet, most contemporary ultrafast studies struggle with clearly identifying and quantifying competing molecular structures/species among the emerging reaction products. Here, we show that mega-electronvolt ultrafast electron diffraction in combination with ab initio molecular dynamics calculations offer a powerful route to determining time-resolved populations of the various isomeric products formed after UV (266 nm) excitation of the five-membered heterocyclic molecule 2(5H)-thiophenone. This strategy provides experimental validation of the predicted high (∼50%) yield of an episulfide isomer containing a strained three-membered ring within ∼1 ps of photoexcitation and highlights the rapidity of interconversion between the rival highly vibrationally excited photoproducts in their ground electronic state.

Synthesis and Reactivity of Fluorenyl-Based Germanium(II) Compounds.

We present the synthesis of alkyl-substituted germylenes GeFlu2, Ge(FluTMS)2, and FluTMSGeCl (Flu = 9H-fluorenyl, FluTMS = 9-trimethylsilyl-9H-fluorenyl) using bulky fluorenyl ring systems and modifications of that. GeFlu2 can only be crystallized as its three-membered ring trimer, whereby the reaction is accompanied by the formation of several byproducts, such as [Li(THF)4][Ge(Ge3Flu7H)]. These results led to the modification of the fluorenyl framework by substitution the one H atom in the 9-position by a TMS group. With the synthesis of the corresponding Li salt LiFluTMS, Ge(FluTMS)2 could be isolated in good yields in a further reaction. The homoleptic Ge(FluTMS)2 is found in its crystalline form as a monomer and thus belongs to the series of monomeric alkyl-substituted germylenes. Also, the corresponding monoalkyl-substituted halogenido germylene was isolated as a four-membered ring tetramer [FluTMSGeCl]4 during an unselective reaction. However, FluTMSGeCl undergoes significant stabilization through the formation of the monomeric phosphane adduct FluTMSGeCl·PEt3, which greatly increases the selectivity of the reaction. During further reactions of Ge(FluTMS)2 with a GeBr solution (toluol/nPr3P), more impressions of the reactivity of Ge(I)X solutions with germylenes were achieved, showing that those germylenes take part in the disproportionation reaction of metastable Ge(I) solutions to give oxidized Ge(IV) compounds like (FluTMS)2GeBr2.

The efficient synthesis of three-membered rings via photo- and electrochemical strategies.

Three-membered rings, such as epoxides, aziridines, oxaziridines, cyclopropenes, vinyloxaziridines, and azirines, are recognized as crucial pharmacophores and building blocks in organic chemistry and drug discovery. Despite the significant advances in the synthesis of these rings through photo/electrochemical methods over the past decade, there has currently been no focused discussion and updated overviews on this topic. Therefore, we presented this review article on the efficient synthesis of three-membered rings using photo- and electrochemical strategies, covering the literature since 2015. In this study, a conceptual overview and detailed discussions were provided to illustrate the advancement of this field. Moreover, a brief discussion outlines the current challenges and opportunities in synthesizing the three-membered rings using these strategies.

Hydrosilylation of BB triple bonds: catalyst- and reductant-free construction of B-Si bonds and B2Si heterocycles.

Hydrosilanes undergo mild, uncatalyzed single and double 1,2-addition across the B-B triple bonds of diborynes, leading to an unsymmetrical silyldiborene and compounds with novel non-cluster three-membered B2Si rings. The reactions are a new addition to the very few catalyst- and alkali-metal-free methods available for the construction of B-Si bonds.

Recent advances in catalytic enantioselective carbometallation of cyclopropenes and cyclobutenes.

Enantioenriched small carbocycles are key structures in numerous natural products and pharmaceutically important molecules as well as vital intermediates in organic synthesis. Although various catalytic approaches for the construction of such molecules from acyclic precursors have been developed, direct enantioselective functionalization of preformed three-membered and four-membered rings represents the most straightforward and modular strategy, enabling rapid and diversified synthesis of enantioenriched cyclopropanes and cyclobutanes from a single set of starting materials without the need for the incorporation of specific functional groups. In this Feature Article, we have summarized the recent advances in catalytic enantioselective functionalization of cyclopropenes and cyclobutenes through carbometallation. The plausible mechanisms of such reactions and future of this field are also discussed.

Hematin supported on Colour Catcher®: a biodegradable heterogeneous catalyst for halogen-free CO2 cycloadditions

A Colour Catcher® sheet was employed as a solid support for immobilizing biologically derived porphyrin species. The resulted cheap, user-friendly and recyclable material was efficient in catalyzing the CO2 cycloaddition to three-membered rings.