Tetraurea Calix Research Articles

Influence of H-bond competitors on the solvent-dependent structures of an octaurea-calix[4]tube.

A novel octaurea-calix[4]tube (UC4T) has been synthesized in three steps from the original Beer's p-tert-butylcalix[4]tube ionophore. In a polar solvent (DMSO-d6), UC4T rapidly interconverts between two identical conformations with C2v symmetry for the two calix[4]arene subunits. However, in a less polar solvent mixture (CDCl3/DMSO-d6, 98 : 2), UC4T adopts a highly distorted asymmetric structure, which hinders the formation of typical tetraurea calix[4]arene capsular assemblies. The complexation of potassium (or barium) cations inside the dioxyethylene ionophoric binding site of UC4T triggers a C2v to C4v symmetry rearrangement of the two calix[4]arene subunits. This rearrangement leads to the formation of a transient capsular dimeric species observed in solution upon the addition of KI or BaCl2·2H2O to a solution (CDCl3/DMSO-d6, 98 : 2) of the macrocycle. X-ray studies confirm UC4T's ability to adopt different asymmetric conformations, depending on its interactions with solvent molecules. Two distinct crystal forms (α and β) of UC4T have been obtained, each displaying divergent calix[4]arene subunits with pinched-cone conformations. These conformations exhibit distinctive head-to-tail (α) or head-to-head/tail-to-tail (β) orientations of the ureido groups, which are involved in hydrogen bonding with solvent molecules. Notably, the pseudo-capsular 1D supramolecular polymeric arrays observed in the β form of UC4T assemble to create large parallel solvent channels.

Hydrogen-Bonded Dimeric Capsules with Appended Spiropyran Units: Towards Controlled Cargo Release.

We report the synthesis of unprecedented tetra‐urea derivatives of calix[4]arene and calix[4]pyrrole containing four spiropyran (SP) units at their upper rim. We investigate the photo‐ and acid‐induced isomerization of the monomeric and homo‐dimeric tetra‐ureas derivatives using UV‐Vis and 1H NMR spectroscopies. At micromolar concentration, irradiation of the samples with 365 nm light induces changes in their absorption spectra that are consistent with SP→merocyanine (MC) isomerization. However, analogous experiments at millimolar concentration do not produce noticeable changes in the 1H NMR spectra. The addition of triflic acid to micromolar and millimolar solutions of the tetra‐ureas produces the quantitative isomerization of the SP units to the protonated merocyanine form (E‐MCH+) and the simultaneous disassembly of the capsular dimers to form ill‐defined aggregates. The neutralization of the acid solutions resets the SP form. Under these acid/base treatment conditions, the controlled release of the included guest and the reassembly of the all‐SP tetra‐urea dimers occurs at different extents depending on its calix[4]arene or calix[4]pyrrole scaffold.

Ordered co-encapsulation of chloride with polar neutral guests in a tetraurea calix[4]pyrrole dimeric capsule.

In this work, we describe the stoichiometrically controlled self-assembly process of tetraurea calix[4]pyrrole 1 with a polar neutral guest, trimethylamine N-oxide or beta-alanine betaine, and methyltrioctylammonium chloride (MTOACl) salt into two supramolecular architectures which differ in morphology and stoichiometry. Whereas an equimolar solution of tetraurea calixpyrrole 1, polar guest and MTOACl produces a four-particle inclusion assembly, a mixture of the same components in a 2 : 1 : 1 molar ratio induces the formation of a dimeric capsular assembly displaying multiple guests which are orderly co-encapsulated. The influence of other polar guests and ammonium salts on the self-assembly process is also described.

Theoretical study on the ion–pair recognition of Na+/X− (X = F− , Cl− , Br− ) by urea calix[4]bis crown-3 derivative

The structure of tetraurea calix[4]bis crown-3 derivative (Ht) and its complexes with ion–pair Na+/X− (X = F− , Cl− , Br− ) were studied using quantum mechanical (QM) methods (at the B3LYP/6-31G(d,p) level) and molecular dynamics (MD) simulations under various conditions. Two types of complexes (host-separated type (S) and contact type (C)) were found based on QM calculations in the gas phase. The ion-binding sites in Ht, the interaction forces between Na+/X− and Ht and the recognition selectivity for ion pairs were discussed in detail. In the case of host-separated type (S), the MD simulation results showed that the halogen anion gradually broke away from the host molecule in water. However, the anion got into the calix[4]arene subunit and interacted with sodium cation in chloroform solvent. For the contact type, anion and cation were always embraced by the host molecule during a 1-ns simulation both in water and chloroform. These results indicated that Ht could be a potential selective ion–pair receptor, and the QM+MD strategy could provide reasonable descriptions for ion–pair recognitions.

ChemInform Abstract: Supramolecular Capsules Derived from Calixpyrrole Scaffolds

AbstractReview: 66 refs.

Supramolecular Capsules Derived from Calixpyrrole Scaffolds

AbstractThis review article describes recent results obtained in the self‐assembly of supramolecular capsules derived from calixpyrrole components. Due to their ease of synthesis, calix[4]pyrroles are by far the most typically used units in these systems. A clear conformational and structural analogy exists between calix[4]arenes and calix[4]pyrroles. However, to date, the number of examples in the literature that use calix[4]pyrrole scaffolds instead of calix[4]arenes for the construction of supramolecular capsules is still meager. Four different approaches are considered for the use of calix[4]pyrrole derivatives in the assembly of molecular capsules. Firstly, in an analogous manner to resorcin[4]arenes and pyrogallol[4]arenes, aryl‐extended calix[4]pyrroles with hydroxyl groups in their upper rim self‐assemble through direct or mediated rim‐to‐rim interactions into capsular aggregates. Secondly, aryl‐extended calix[4]pyrroles having non‐complementary hydrogen‐bonding groups in their upper rim form dimeric templated capsules with suitable substrates. Thirdly, the elaboration of the upper rim of the calix[4]pyrroles with urea groups affords dimeric capsules with polar functionalized interiors that closely resemble their tetraurea calix[4]arene analogs. Finally, the chemical modification of the pyrrole units of octamethyl calix[4]pyrrole into tetrathiafulvalene derivatives yields dimeric capsules induced by anion coordination that display interesting properties in the binding of electron‐poor guests.

Exclusive Self-Assembly of a Polar Dimeric Capsule between Tetraurea Calix[4]pyrrole and Tetraurea Calix[4]arene

The exclusive self-sorting observed in the self-assembly process between tetraurea benzyl calix[4]pyrroles and tetraurea tolyl calix[4]arene to afford unprecedented hybrid dimeric capsules with polar interiors is described. The coencapsulation of a solvent molecule with an organic guest yields four particle aggregates in which the guests are confined and restricted into single hemispheres due to the polar requirements of the internal cavity.

Selective dimerisation of tetraurea calix[4]arenes

The formation of hydrogen-bonded dimeric capsules from tetraurea calix[4]arenes is controlled by loops, connecting adjacent urea functions, and more or less bulky substituents. The dimerisation is only possible if loops are not overlapping and if the respective residues can pass the loops. A sorting scheme based on small and bulky residues and one to four loops allows reducing the number of possible dimers from 35 to 6 in a stoichiometric mixture of 11 ureas. With three different loop sizes (O–(CH2) n –O chains with n = 10, 14, 20 connecting adjacent phenylurea functions via their meta positions), it is possible to distinguish four urea residues of different sizes (small, medium, bulky and giant) ranging from tolyl to 4-[tris-(4-t-butylphenyl)methyl]-phenyl. While the smallest residue can pass all loops, the largest is excluded by all loops.

Dimeric Capsules Formed by Tetra‐CMPO Derivatives of (Thia)Calix[4]arenes

Thiacalix[4]arene 2, calix[4]arene 3a and its tetraether fixed in the cone conformation 3b form homo- and heterodimeric capsules in apolar solvents, which are held together by a seam of NH...O=P hydrogen bonds between carbamoylmethyl phosphine oxide functions attached to their wide rim. Their internal volume of approximately 370 A(3) requires the inclusion of a suitable guest. Although neutral molecules such as adamantane (derivatives) or tetraethylammonium cations form kinetically stable complexes ((1)H- and (31)P-time scale), the included solvent is rapidly exchanged. The internal mobility of the included tetraethylammonium cation is distinctly higher (DeltaG=42.5 and 49.7 kJ mol(-1) for 3a and 3b) than that for similar capsules of tetraurea calix[4]arenes 1. Mixtures of 1 with 2, 3a, or 3b contain only the two homodimers but the heterodimerization occurs with the tetraloop tetraurea 6, which cannot form homodimers. Two dimers with cationic guests (2.(C(5)H(5))(2)Co(+).2 and 3a.Et(3)NH(+).H(2)O.3a) were confirmed by single-crystal X-ray analysis.

Self-assembly of dimeric tetraurea calix[4]pyrrole capsules

Calix[4]pyrroles having extended aromatic cavities have been functionalized with 4 ureas in theparaposition of theirmesophenyl substituents. This elaboration of the upper rim was completed in 2 synthetic steps starting from the α,α,α,α-tetranitro isomer of the calix[4]pyrrole obtained in the acid catalyzed condensation ofp-nitrophenyl methyl ketone and pyrrole. In dichloromethane solution and in the presence of 4,4′-bipyridineN-N′-dioxide the tetraurea calix[4]pyrrole dimerizes reversibly forming a cyclic array of 16 hydrogen bonds and encapsulating 1 molecule of bis-N-oxide. The encapsulated guest is bound in the cavity by hydrogen bonding to the 2 endohedral calix[4]pyrrole centers. Further evidence for dimerization of the tetraurea calix[4]pyrroles is provided by1H-NMR experiments and by the formation of mixed capsules.

A Self‐Sorting Scheme Based on Tetra‐Urea Calix[4]arenes

Size and shape do matter: When dimerized in nonpolar solvents, an equimolar mixture of eleven tetra-urea calix[4]arenes with different wide-rim substituents self-sorts into only six out of 35 different homo- and heterodimers (see picture). Since the calixarene scaffold and the four urea units are the same in all cases, the self-sorting process is driven only by the cooperative action of steric requirements and stoichiometry.

Tetra-urea calix[4]arenes 1,3-bridged at the narrow rim

The synthesis of special tetra-urea calix[4]arene derivatives is described. Two propyl ether groups in 1,3-position and a 5-iodo-isophthalamide bridge connecting two aminopropylether residues in 2,4-position at the narrow rim keep the molecule fixed in the cone conformation. The aryl urea residues are substituted by decyloxy groups in p-position to increase the solubility in apolar solvents, while the iodo substituent allows further functionalization. Two single crystal X-ray structures of 3 and 4 show a strongly pinched cone conformation in which the bridged phenol units are bent outwards, while the phenol units bearing the propyl ether groups are nearly parallel. The molecules are flexible enough, however, to form hydrogen bonded dimeric capsules in apolar solvents. Their (time averaged) D(2) conformation is confirmed by (1)H NMR spectroscopy.

Molecules with New Topologies Derived from Hydrogen‐Bonded Dimers of Tetraurea Calix[4]arenes

Tetraurea calix[4]arenes 2 have been synthesized in which two adjacent aryl urea residues are connected to a loop by an aliphatic chain -O-(CH(2))(n)-O-. The remaining urea residues have a bulky 3,5-di-tert-butylphenyl residue and an omega-alkenyloxyphenyl residue. Since this bulky residue cannot pass through the loop, only one homodimer (22) is formed in apolar solvents, for steric reasons, in which the two alkenyl residues penetrate the two macrocyclic loops. Covalent connection of these alkenyl groups by olefin metathesis followed by hydrogenation creates compounds 3, which consist of molecules with hitherto unknown topology. Their molecular structure was confirmed by (1)H NMR spectroscopy and ESIMS, and for one example by single-crystal X-ray analysis.

Electrochemical response of ferrocenium filled calix[4]arene capsules in solution and immobilized on gold

Hydrogen-bonded dimers of tetra-urea calix[4]arenes are able to include ferrocenium ions as a guest. Heterodimeric capsules are exclusively formed in 1:1 mixtures of tetra-arylurea calix[4]arene 1 with tetra-tosylurea calix[4]arene 2. Sulfide groups attached via spacers on the urea rim of 1 allow their binding to metal surfaces rendering simultaneously their dissociation more difficult. Thus, the electrochemical response of encapsulated ferrocenium could be studied in a self-assembled monolayer (SAM) in addition to the solution electrochemistry with cyclic voltammetry. The stability of the electrochemically active monolayers was tested after a heat treatment (225 °C for 30 min in N 2 atmosphere) and multiple cycling (up to 1200 cycles), which could be required for a possible application as molecular based information storage.

Stepwise Synthesis and Selective Dimerisation of Bis‐ and Trisloop Tetra‐urea Calix[4]arenes

Tetra-urea calix[4]arenes substituted with four mono- or bisalkenyl residues have been converted into bis- or tetraloop compounds by intramolecular olefin metathesis, with use of a tetratosylurea calix[4]arene as template. The same strategy has now been used to synthesise trisloop compounds and bisloop compounds with adjacent loops, completing the series of the loop-containing tetra-urea derivatives. A tetra-urea calix[4]arene of the AABB type, where A stands for a bisalkenyl- and B for a monoalkenyl-substituted urea unit, was used as precursor for the three loops. It was easily synthesised from a tetraamino calix[4]arene in which two adjacent amino groups were Boc-protected. The ABCB-type precursor for the two adjacent loops was prepared through protection of two opposite amino functions with trityl groups. The capabilities of the novel macrocyclic tetra-ureas for the selective formation of hydrogen-bonded dimers were studied.

Self-assembled dendrimers with uniform structure

Calix[4]arenes substituted at their wide rim by four aryl urea residues (1) form hydrogen-bonded dimers in apolar solvents. Replacement of one urea residue by an acetamido moiety leads to calix[4]arene derivatives (5) which form hydrogen-bonded tetramers under the same conditions. Both self-assembly processes occur independently. Therefore, molecules have been prepared in which a tetra-urea calix[4]arene and a tri-urea mono acetamide derivative are covalently connected between their narrow rims by a long, mainly aliphatic chain [-O-(CH(2))(n)-C(O)-NH-(CH(2))(m)-O-] (7). In the presence of an equimolar amount of tetra-tosyl urea calix[4]arene () they form dendritic assemblies since the well known heterodimerization of tetra-tosyl and tetra-aryl urea calix[4]arenes prevents the formation of a cross-linked structure. Covalent connection of adjacent urea residues leads to tetra-loop derivatives (3) that cannot form homodimers, but instead form heterodimers with tetra-aryl or tetra-tosylureas. Therefore, similar dendrimers should be available using the selective dimerization observed for 3. The formation of a single, structurally uniform dendrimer from eight building blocks is confirmed by (1)H NMR spectra, showing only peaks that are also found for respective model assemblies. Translational diffusion coefficients of the assemblies have been determined using (1)H DOSY NMR.

Guest exchange in dimeric capsules formed by tetra-urea calix[4]arenes

Ten tetra-urea calix[4]arene derivatives with different ether residues (methyl, pentyl, benzyl, all combinations of methyl and pentyl, 1,3-dibenzyl-2,4-dipentyl), including also the tetrahydroxy compound and the 1,3-dipentyl ether, were synthesised. Their urea groups were substituted with a lipophilic residue to ensure sufficient solubility in cyclohexane. Thus, kinetics for the exchange of the included guest (benzene) against the solvent (cyclohexane) could be followed by 1H NMR spectroscopy. The apparent first order rate constants decrease with increasing size of the ether residues from methyl to benzyl by more than three orders of magnitude. This can be understood by a decreasing flexibility/mobility of the calixarene skeleton. In line with this explanation is the rather slow exchange for the tetrahydroxy compound, where the cone conformation is stabilised by a cyclic array of intramolecular OH...OH hydrogen bonds.

Self-Assembled Polymers Based on bis-Tetra-Urea Calix[4]arenes Connected via the Wide Rim

Six double calixarenes were synthesised in which two tetra-urea calix[4]arenes are linked by a rigid spacer between the urea functions at their wide rim. The dimerisation of their tetra-urea parts leads to hydrogen-bonded polymeric assemblies in apolar solvents. The addition of the stoichiometric amount of a tetra-tosylurea calix[4]arene disrupts the polymeric structures due to the preferred formation of heterodimeric capsules between tetra-aryl and tetra-tosylurea calix[4]arenes. The existence of polymeric assemblies was further established by AFM studies on spin-coated samples.

Calix[4]arene‐Based Bis[2]catenanes: Synthesis and Chiral Resolution

The exclusive formation of hydrogen-bonded dimers between tetraaryl and tetratosylurea calix[4]arenes has been used to prepare a series of ten "bisloop" tetraurea calix[4]arenes 3, in which adjacent phenylurea groups are covalently linked through alpha,omega-dioxyalkane chains. This dimerization with tetratosylurea 2 as template preorganizes the alkenyl residues of tetra(m-alkenyloxyphenyl) ureas 1 and enables their selective connection in high yield (up to 95 %) by olefin metathesis followed by hydrogenation. The "bisloop" calixarenes 3 also exclusively form heterodimers with 1. Thus, in a separated metathesis/hydrogenation sequence, a series of 14 cyclic bis[2]catenanes 4, in which two calix[4]arenes are connected through their wide rims by two pairs of interlocked rings (total size 29 to 41 atoms), were prepared in yields of up to 97 %. Optical resolution of these chiral bis[2]catenanes was studied by HPLC on chiral stationary phases. The single-crystal X-ray structure of one example (4(P,10)) confirmed the interlocking rings and revealed that the hydrogen-bonded dimeric capsule of the calix[4]arene can be "completely" opened.

Tetraurea calix[4]arenes with sulfur functions: synthesis, dimerization to capsules, and self-assembly on gold

Various calix[4]arene derivatives, fixed in the cone conformation by decylether groups and functionalized at their wide rim by urea residues, were synthesized. In two compounds (,) sulfur functions were attached to the urea groups via different spacers in order to allow binding to metal surfaces. While they exist as single molecules in polar solvents, tetraurea calix[4]arenes of this type () combine to form dimeric capsules in aprotic, apolar solvents. A solvent molecule is usually included in such a capsule, if no guest with a higher affinity is present. In the presence of an equimolar amount of the tetratosylurea, the exclusive formation of heterodimers, consisting of one molecule of and, is observed. The homo- and heterodimerization of the newly prepared derivatives, were studied by 1H NMR to establish the conditions under which they exhibit the desired dimerization behaviour. Self-assembled monolayers (SAMs) were formed using the single calix[4]arenes, and the heterodimeric capsules. Chloroform, dichloromethane and ferrocenium cations were used as guests in these immobilized heterodimeric capsules. The particular supramolecular architecture of the heterodimers should ensure that, after the immobilization on the metal surface, decomposition of the capsules and release or exchange of the guest is impossible or at least hindered. The self-assembly process and the stability of SAMs formed by capsules filled with ferrocenium cations in electrolyte solutions were tested with surface plasmon spectroscopy. The inclusion of guests, such as dichloromethane or ferrocenium, in the immobilized capsules were confirmed by classical surface plasmon spectroscopy, by gold nanoparticle absorption spectroscopy and by time-of flight secondary ion mass spectrometry (ToF-SIMS). The film stability and quality was tested by cyclic voltammetry.