Terrestrial Origin Research Articles

A Paleoenvironmental Reconstruction of Lake Vrana on the Island of Cres (Croatia) Based on the Geochemistry and Mineralogy of the Late Pleistocene and Holocene Sediments

A 7.4 m long sediment core has been retrieved from the central part of Lake Vrana on the island of Cres to reconstruct the paleoenvironmental conditions. Lake Vrana is the deepest freshwater lake in Croatia, located in the karst region of the eastern Adriatic coast. A dated sediment sequence in Lake Vrana of 4.4 m has spanned the past 16.4 kyr, and it featured a dynamic sediment deposition until the beginning of the Holocene, including strong sediment input and supply to the lake by runoff sediments of dolomitic origin from the catchment in the period 16.4–14.4 cal kyr BP. High organic carbon content, which originates from mixed terrestrial and aquatic origins in the periods 14.4–13.3 cal kyr BP and 12.7–11.7 cal kyr BP, indicates fluctuating lake levels in shallow water environments during the Late Glacial to Holocene transition. The Holocene sequence indicates the development of more stable conditions and continuous sediment deposition, characterized by an increasing trend of siliciclastic sediments delivered into the lake during the early Holocene (11.7–10 cal kyr BP) and dominantly from 8 to 4.4 cal kyr BP, indicating enhanced input and erosion, which coincides with the humid and pluvial period recorded in the central Mediterranean region. It is followed by sediments with high organic carbon content between 4.4 and 1.6 cal kyr BP, which points to higher lake productivity. Calcite sedimentation prevailed between 1.6 to 0.4 cal kyr BP, indicating stable deeper-lake conditions. Predominantly, siliciclastic sediments from 0.4 to 0.1 cal kyr BP pointed to erosion during the Little Ice Age (LIA), with enhanced precipitation and sediment discharge from the catchment. The re-establishment of calcite sedimentation has been observed over the last 100 years.

Petrographic and geochemical signatures of the Upper Permian Gondwana coals: Newcastle Coal Measures, Northern Sydney Basin, Australia

This research presents an integrated approach to organic petrographical and geochemical characteristics of the Upper Permian Newcastle Coal Measures outcropping in the northern Sydney Basin, southeast Australia. Twenty-seven coal, coaly mudstone and mudstone samples were collected and analyzed by using organic petrography (maceral composition and vitrinite reflectance) techniques, Rock–Eval pyrolysis, bitumen extraction and gas chromatography - mass spectrometry (GC–MS). The obtained results indicate that the samples exhibit promising gas-prone source rock potential and contain a predominantly terrestrial in origin organic matter, with limited contribution by marine organisms. The prevalence of terrestrial organic matter is inferred by the presence of collotelinite and sporinite macerals in most of the samples and the ternary plot of C27, C28 and C29 regular steranes. Further, the low C27/C29 ratio, the cross-plots of C27/(C27 + C29) regular steranes vs. Pr/Ph ratio, the C27/C29 vs. Pr/Ph and the C24 tetracyclic/C26 tricyclic terpane ratio point also to the terrestrial origin of the organic matter. The obtained values of vitrinite reflectance, Tmax, OEP27–31 and CPI25–33, along the cross plots of 20S/(20S + 20R) versus ββ/(ββ + αα) suggest that the samples are immature and were subjected to a low burial depth. The examined samples indicate accumulation in a delta-plain environment of deposition, under fluctuating oxic/anoxic conditions, in a humid climatic zone that is characterized by dry periods, interrupting the longer-termed humid climatic regime. This research adds knowledge on the source rock potential in the northern Sydney Basin and on the environmental and climatic setting of a time interval just prior to the major Permian - Triassic climatic crisis.

Strong large‐scale structure–function coupling in benthic bacteria is mediated by algae in a geodiverse river network

AbstractBenthic bacteria in stream ecosystems drive organic matter mineralization. However, knowledge on how this ecosystem function is driven by bacterial community composition in interaction with environmental conditions and organic matter resources is poor. This is especially true when considering the regional scale of river networks, at which environmental conditions vary in a scale‐dependent manner and are spatially structured due to asymmetrical water flow. Similarly, organic matter resources may have a terrestrial origin in remote headwaters or be sourced locally from algae living in close proximity to bacteria in benthic biofilms. We investigated benthic biofilm meta‐community structure and function across the > 6700 km2 river network of the near‐natural Vjosa in Albania and Greece and found a strong control of the benthic algal community on bacterial community composition (13.4% of variability explained). In addition, bacterial community composition has linkages to water chemistry, which itself is strongly shaped by the diverse geology in the catchment, and to dispersal, shaping metacommunity structure as a neutral process. Notably, bacterial community composition explained the largest single fraction of variability (31.5%) in extracellular enzymatic activities, while there was no dependency of enzyme ratios on organic matter nor environmental conditions. Synergistic effects between bacteria and algae accounted for additional 47.3% of variability in heterotrophic functioning, emphasizing the importance of algal–bacterial interactions in benthic biofilms. Our findings shed new light on bacterial structure–function coupling highlighting the importance of algal–bacterial interactions at the river network scale.

Biological and optical properties of Baltic surface waters and sea-land interaction – searching for interdependencies

In June 2015, aboard the r/v Akademik Ioffe, a study was conducted on the surface zooplankton community in selected Baltic Sea basins along the Arkona Basin - Gulf of Gdansk route. Samples were collected using a 100 μm mesh plankton net at depths of 2–0 m. Additionally, optical and physical properties were assessed through remote (lidar) and in-situ (CTD and surface microlayer seawater sampling) measurements to provide a foundation for biological analysis.The zooplankton included 19 taxa from holoplanktonic Copepoda, Diplostraca, Rotifera, and meroplanktonic stages of Bivalvia, Gastropoda, Polychaeta, Cirripedia, and Pisces. Zooplankton abundance ranged from 37399 ind. m−3 (Slupsk Furrow) to 267744 ind. m−3 (Bornholm Basin), with copepods being the most numerous groups. While the zooplankton community composition was relatively stable across the study area, their distribution varied. The most diverse station was Slupsk Furrow, with Copepoda, Diplostraca, Rotifera, and meroplankton making up approximately 40%, 25%, 20%, and 5%, respectively. In contrast, Bornholm Basin had the highest zooplankton numbers, mainly dominated by copepods (90%) with minor contributions from other groups.Fluorescence properties of surface microlayer organic matter were assessed by measuring the intensity ratio of the primary fluorophores (A, C, M, and T) of dissolved organic matter molecules, represented as (M + T)/(A + C). This indicated a mixed marine-terrestrial nature of organic matter in stations west of the Slupsk Furrow. Stations at the Arkona Basin and the Slupsk Furrow had the highest ratio values, suggesting a significant marine organic matter source. In contrast, stations east of the Slupsk Furrow exhibited lower (M + T)/(A + C) ratios, indicating a dominant terrestrial origin for organic matter. Lidar results further supported the division of the study area into two regions based on bio-optical properties: a western region (Arkona Basin, Bornholm Basin, and Slupsk Furrow) and an eastern region (Gotland Basin and Gdansk Basin). Moreover, the variability in zooplankton community structure and distribution is closely correlated with the water hydrographic and optical characteristics. We can therefore conclude that all the water properties that we have studied are a derivative of the interaction of sea and land.

Buoyancy regulation in insects.

Multiple insect lineages have successfully reinvaded the aquatic environment, evolving to complete either part or all of their life cycle submerged in water. While these insects vary in their reliance on atmospheric oxygen, with many having the ability to extract dissolved oxygen directly from the water, all retain an internal air-filled respiratory system, their tracheal system, due to their terrestrial origins. However, carrying air within their tracheal system, and even augmenting this volume with additional air bubbles carried on their body, dramatically increases their buoyancy which can make it challenging to remain submerged. But by manipulating this air volume a few aquatic insects can deliberately alter or regulate their position in the water column. Unlike cephalopods and teleost fish that control the volume of gas within their hydrostatic organs by either using osmosis to pull liquid from a rigid chamber or secreting oxygen at high pressure to inflate a flexible chamber, insects have evolved hydrostatic control mechanisms that rely either on the temporary stabilization of a compressible air-bubble volume using O2 unloaded from hemoglobin, or the mechanical expansion and contraction of a gas-filled volume with rigid, gas-permeable walls. The ability to increase their buoyancy while submerged separates aquatic insects from the buoyancy compensation achieved by other air-breathing aquatic animals which also use air within their respiratory systems to offset their submerged weight. The mechanisms they have evolved to achieve this are unique and provide new insights into the function and evolution of mechanochemical systems.

Hydrodynamic Analysis of Sediment Deposition in Mangrove Wetlands of Zhanjiang Bay-Based on the Perspective of Sediment Grain Size

Grain size is an important parameter reflecting the characteristics of sedimentary dynamics, and mangrove wetland sediments record abundant sedimentary environmental information during transportation and deposition. To investigate the vertical characteristics of sediment grain size and sedimentary dynamic processes in the mangrove wetlands of Zhanjiang Bay, this study analyzed the grain size parameters, frequency distribution curves, and hydrodynamic characteristics of sediment cores collected from the mangrove wetlands in Nansan Island (A), the south of Techeng Island (B), Guanhai Promenade (C), Dongtoushan Island (D), Huguang Town (E), and the west of Donghai Island (F). The objective was to reveal the evolution of sedimentary dynamics in Zhanjiang Bay over the past century. The results showed that: (1) There were significant differences in the grain size characteristics among the sediment cores. Cores A and B had poor sorting and flat kurtosis, with sediment types of silty sand. Core C had a sinuous mean grain size and kurtosis curve, poor sorting, positive skewness, and a sediment type of silty sand. Core D had negative skewness, poor sorting, and moderate kurtosis, with a sediment type of sandy silt. Cores E and F had negative skewness, poor sorting, and large variations in kurtosis, with sediment types of sandy silt; (2) The grain size frequency distribution curves at depths of 25 cm, 50 cm, 75 cm, and 100 cm in each sediment core exhibited bimodal and unimodal characteristics, indicating the involvement of multiple sedimentary media in the depositional process. Cores A, B, C, and D had grain sizes concentrated on the sandy particle end, indicating strong sedimentary dynamics. Cores E and F had prominent silt-sized grains, indicating weaker sedimentary dynamics; (3) The grain size characteristics of the sediments were related to their terrestrial or island origins and the sediment supply from runoff. The depositional processes were deeply influenced by tidal dynamics, mangrove distribution, and human activities. The accelerated deposition rate in Zhanjiang Bay in recent years may affect navigation channels, and thus, attention should be paid to the ecological environment of wetlands within the bay.

Chemical and isotopic composition of rainwater in the eastern Yucatan peninsula, Mexico

Given that rain is the component of precipitation that reaches the surface of the earth, and aiming to contribute to the global efforts of rainwater monitoring, we present information regarding the origin of ions and their relationship with isotopic patterns and the source of moisture for rainwater in the Mexican Caribbean, which not only may be useful for pollution and atmospheric studies, but also for estimating groundwater recharges, understanding dust nuisances, and offering information about water quality for rainwater harvesting. In this paper, we describe the chemical composition of rainwater in terms of major ions, isotopic composition, and the most probable sources of moisture in the Caribbean coastal zone of Mexico, considering the three main climatic seasons in this area. The chemistry of rainwater displayed a noticeable influence from sea-salt spray, land-blown dust, and anthropogenic impacts such as agriculture and biomass burning. We identified the predominant terrestrial origin of calcium, namely anthropogenic contributions of sulfates and nitrates, plus potassium from sea spray and anthropogenic emissions. The local meteoric water line is δ2H = 8.2 δ18O + 13.8 (R² = 0.9601) suggesting enrichment due to evaporative losses, various moisture sources and local climatic effects. Although isotope composition was not different by site, it was by season, as opposed to water chemistry. We conclude that the water chemistry responds to the local conditions of the air column below the clouds, while the isotope composition is influenced by the origin of moisture and the physical conditions in which water evaporates and condenses as well.

Exploring the variations in molecular characteristics of dissolved organic matter driven by aquaculture types

In recent decades, global aquaculture has expanded rapidly, raising concerns about coastal environmental degradation due to unregulated or poorly regulated discharge of aquaculture tailwater. Despite the crucial role of dissolved organic matter (DOM) in biogeochemical processes and aquatic biodiversity, the influence of aquaculture type on the molecular characteristics of DOM remains largely unexplored. Herein, this study investigated the variations in chemical and spectroscopic properties as well as molecular characteristics and composition of DOM across different aquaculture types including crustacean, fish and shellfish. Our findings revealed notable differences in DOM quantities among different aquaculture types, with crustacean and fish aquaculture water containing higher DOM amount compared to shellfish aquaculture water. This disparity can be attributed to the more frequent formulated feeds of crustacean and fish in contrast to shellfish aquaculture. Furthermore, distinct differences were also observed in the characteristics and composition of DOM among the different aquaculture waters. Specifically, DOM in shellfish aquaculture water exhibited a higher abundance of unsaturated and reduced molecules as well as increased aromaticity compared to the other two aquaculture waters. Conversely, DOM from fish aquaculture water showed a greater contribution from terrestrial origin characterized by elevated levels of plant-based components such as lignin-like and tannin-like compounds. Interestingly, DOM from shellfish aquaculture water contained lower levels of microbial-derived components such as lipid-like and protein-like compounds, likely due to reduced microorganism populations resulting from lower nutrients availability and higher salinity. Overall, these significant variations in characteristics and composition of DOM underscore the potential impacts of aquaculture type on the DOM biogeochemical cycle and the environmental quality in aquatic ecosystems.

Changing source waters on the Northeast US Continental Shelf: Variation in nutrient supply and phytoplankton biomass

The Northeast US Continental Shelf (NES) is a highly productive marine ecosystem that has experienced wide swings in phytoplankton chlorophyll concentration (CHL). To better understand this variability, we examined changes in CHL over the period 1998–2022, while also considering three indicators of the potential supply of nutrient source waters including cross-shelf advection via deep channels, transport from beyond the shelf edge via Gulf Stream warm core rings (WCR), and input from river and estuarine discharge. Traditionally, deep channel advection of water across the NES was assumed to be derived from Labrador Slope Water (LSW) and Warm Slope Water (WSW). These designations do not fully capture the range of water types contributing to cross-shelf advection. The contribution of LSW and WSW was reciprocal over time, with the presence of WSW at an increased level in recent years. There has been an increase in the number of WCRs off the NES represented by indices of ring occupancy. Precipitation increased over the study period as well, generally over the NES region and in particular in the Mid-Atlantic Bight drainage. We see evidence of the effect of increased precipitation on the NES proper through a change in the area of the ocean surface having 555 nm reflectance with sr−1 > 0.004. Using a canonical analysis, CHL correlated positively with the proportion of LSW and negatively with WSW. These correlations suggest there are aspects of the nutrient content associated with these water masses that are key to phytoplankton growth. WCR frequency negatively correlated with CHL, which was expected since the nutrient loadings of WCRs tends to be low. Finally, CHL negatively correlated with precipitation rate, which suggests terrestrial origin nutrient inputs to the NES are minor. We suggest that in order to understand future CHL dynamics in the NES, careful consideration of advective sources of nutrients in the Northwest Atlantic is necessary.

Depositional environments and thermal maturity of the hydrocarbon source rocks in the Devonian–Early carboniferous Ora Formation from palynological organic petrographic investigations in northern and western Iraq

The study investigates the palynofacies, organic matter character, and hydrocarbon generation potential of this rock unit, based on surface and subsurface samples from the Ora Formation type-section in extreme northern Iraq and the Akkas-3 well in western Iraq, respectively. Dark, mostly oxidized, gelified platy amorphous organic matter (AOM) dominates the palynological components in the surface section, in addition to a few rounded spores and structured phytoclasts. In contrast, palynomorphs, including Ambitisporites avitus, Aneurospora spp., Vallatisporites verrucosus, Acinosporites spp., Verrucosisporites nitidus and the algae Botryococcus, are predominant in studied samples from the Akkas-3 well. Statistical cluster analysis identified three palynofacies types in the surface section based on stratigraphic variations in the particulate organic matter. These vary from high amorphous organic matter (AOM), moderate phytoclast, and low palynomorph abundances that represent proximal suboxic–anoxic shelfal environments to moderate to good AOM and low to moderate palynomorph abundances that represent distal suboxic–anoxic or distal dysoxic–anoxic shelfal environments. The organic petrographic study of the outcrop section also revealed the strong effect of oxidation, where dispersed terrigenous and amorphous organic materials in the form of granular and gelified forms dominate and reflect a terrestrial origin of these components. In the subsurface section, a mixed terrestrial and less marine or lacustrine origin characterized the studied organic matter, where land plant spores (sporinite), in addition to vitrinite and inertinite, are dominant with a few scattered liptinite macerals. The difference in thermal maturity between the outcrop and subsurface samples is likely due to the higher tectonic burial of the outcrop samples that form part of the Northern Thrust Zone of Iraq. Nevertheless, higher abundances of AOM (oil-prone kerogen type II) accumulated in the northern outcrop type section. This might imply that the Ora Formation has a higher potential for hydrocarbon production north of the Akkas field.

River-fed basin-fill and hyperpycnites in an island-arc setting: The Silurian–Devonian Kekexiongkuduke Formation from Western Junggar, China

Sediments from land are primarily transported into basins through hyperpycnal flow, which plays a significant role in the process of basin filling. Various models of hyperpycnites have been proposed. This study examines a Silurian–Devonian basin-fill sequence in NW China to validate existing models and presents a visually compelling case demonstrating the process of basin filling through flood-dominated river discharge.The Utubulak Member of the Kekexiongkuduke Formation can be subdivided into three parts, representing basin floor, slope and shelf environments, collectively representing a regressive basin fill sequence. The lower part consists of flood-related turbidites contain or encompass material of terrestrial and marine origin, their sustained and pulsed velocity structures are similar to river discharge. These turbidites may result from basinal hyperpycnal flow or retrogressive failures of the shelf-edge (hyperpycnal) delta. The middle (slope deposits) contains bi-graded hyperpycnite bed interpreted commonly attributed to deposition by river floods exhibiting the classical waxing-waning configuration. Additionally, fine-grained deposits resulting from river-generated, dilute hyperpycnal or hypopycnal plumes are observed interbedded with the basin turbidites or slope background deposits. In the upper part, the presence of thick-bedded sandstones indicates that sustained hyperpycnal flow can transport sands to the shelf-edge/shelf, facilitating deep-water sand delivery. The vertical distribution of the various flood-related facies in basin floor, slope and shelf strata emphasize the complexity of hyperpycnites in different settings, and particularly highlighting challenges associated with their recognition in basin deposits.The investigated succession accumulated in an island-arc setting which provided a favorable condition for a river-fed turbidite system to develop. The narrow shelf facilitated transport of sediments by hyperpycnal flows directly into the basin, while erosion of high mountains promoted a high sediment supply for hyperpycnal flow. And a river-fed turbidite system commonly developed during the late stages of basin filling.

Fluid Inclusion, Rare Earth Element Geochemistry, and Isotopic (O and S) Characteristics of the Ardakan Barite Deposit, Yazd Province, Iran

The stratabound barite mineralization occurs in the Ardakan deposit as patches and veins in the dolomites and limestones of the Middle Triassic Shotori Formation. Rare-earth element (REE) geochemistry, O and S isotopes, and fluid inclusion data were used to identify the mode of barite formation. Barite is associated with subordinate fluorite and quartz and, to a lesser extent, with sphalerite, malachite, chrysocolla, and iron and manganese oxide-hydroxides. Barite contains a very low ∑REE concentration (14.80–19.59 ppm) and is enriched in light rare-earth elements (LREEs) relative to heavy rare-earth elements (HREEs). The low ∑REE content and the Ce/La ratio (4.0–6.5) indicate a hydrothermal (terrestrial) origin of the barite. Similar to barite, the ∑REE content in fluorite is low (0.14–6.52 ppm) and suggests a sedimentary setting. The Tb/Ca versus Tb/La diagram also indicates a hydrothermal origin of fluorite. The δ34S values in the barite (+27.9 to +32.4‰) indicate that the sulfur most likely originates from evaporites and/or connate waters from the Late Precambrian to the Lower Cambrian. The δ18O values (+15.9 to +18.1‰) in the barite show that the oxygen originated either from Late Precambrian–Lower Cambrian evaporites or from basinal brines with slightly higher δ18O values than the evaporites. The salinity and homogenization temperature ranges of the aqueous fluid inclusions in barite, fluorite, and quartz (0.88–16.89 wt% NaCl equivalent and 90–270 °C, respectively) reveal that the mineralizing fluids were formed from basinal brines with the participation of heated meteoric water. From this, it is concluded that the Ardakan barite deposit was formed by the meeting of heated, ascending sulfate-bearing meteoric water and cooler, Ba-bearing connate water trapped in the overlying Middle Triassic dolomites and limestones. The Ardakan deposit belongs to the structure-related class and the unconformity-related subclass of barite deposits.

Arcobacteraceae are ubiquitous mixotrophic bacteria playing important roles in carbon, nitrogen, and sulfur cycling in global oceans.

Mixotrophy is an important trophic strategy for bacterial survival in the ocean. However, the global relevance and identity of the major mixotrophic taxa remain largely elusive. Here, we combined phylogenetic, metagenomic, and metatranscriptomic analyses to characterize ubiquitous Arcobacteraceae based on our deep-sea in situ incubations and the global data. The phylogenomic tree of Arcobacteraceae is divided into three large clades, among which members of clades A and B are almost all from terrestrial environments, while those of clade C are widely distributed in various marine habitats in addition to some terrestrial origins. All clades harbor genes putatively involved in chitin degradation, sulfide oxidation, hydrogen oxidation, thiosulfate oxidation, denitrification, dissimilatory nitrate reduction to ammonium, microaerophilic respiration, and metal (iron/manganese) reduction. Additionally, in clade C, more unique pathways were retrieved, including thiosulfate disproportionation, ethanol fermentation, methane oxidation, fatty acid oxidation, cobalamin synthesis, and dissimilatory reductions of sulfate, perchlorate, and arsenate. Within this clade, two mixotrophic Candidatus genera represented by UBA6211 and CAIJNA01 harbor genes putatively involved in the reverse tricarboxylic acid pathway for carbon fixation. Moreover, the metatranscriptomic data in deep-sea in situ incubations indicated that the latter genus is a mixotroph that conducts carbon fixation by coupling sulfur oxidation and denitrification and metabolizing organic matter. Furthermore, global metatranscriptomic data confirmed the ubiquitous distribution and global relevance of Arcobacteraceae in the expression of those corresponding genes across all oceanic regions and depths. Overall, these results highlight the contribution of previously unrecognized Arcobacteraceae to carbon, nitrogen, and sulfur cycling in global oceans.IMPORTANCEMarine microorganisms exert a profound influence on global carbon cycling and ecological relationships. Mixotrophy, characterized by the simultaneous utilization of both autotrophic and heterotrophic nutrition, has a significant impact on the global carbon cycling. This report characterizes a group of uncultivated bacteria Arcobacteraceae that thrived on the "hot time" of bulky particulate organic matter and exhibited mixotrophic strategy during the in situ organic mineralization. Compared with clades A and B, more unique metabolic pathways were retrieved in clade C, including the reverse tricarboxylic acid pathway for carbon fixation, thiosulfate disproportionation, methane oxidation, and fatty acid oxidation. Global metatranscriptomic data from the Tara Oceans expeditions confirmed the ubiquitous distribution and extensive transcriptional activity of Arcobacteraceae with the expression of genes putatively involved in carbon fixation, methane oxidation, multiple sulfur compound oxidation, and denitrification across all oceanic regions and depths.

Dissolved organic matter released from beach wrack is source-specific and molecularly highly diverse

Beach wrack is an important supplier of nutrients and organic matter to sandy beach ecosystems and underlying subterranean estuaries (STEs), producing metabolic hotspots in these otherwise organic carbon- and nutrient-poor environments. To assess the impact of beach wrack type (e.g., marine, terrestrial, plant, animal) and environmental settings (e.g., tidal inundation, precipitation, and solar irradiation) on nutrient and dissolved organic matter (DOM) release, a series of leaching experiments was conducted. Quantities of leached nutrients and dissolved organic carbon (DOC) were determined, and DOM molecular composition was investigated using Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR-MS). Millimolar—to molar amounts of DOC and dissolved nitrogen were released from the beach cast per kg dry weight, with type of wrack and leaching medium (fresh- vs. saltwater) exerting the biggest influences. Exemplary for animal cast, jellyfish leached up to two 100-fold more, mostly organic, nitrogen compared to all other beach wrack types. FT-ICR-MS data of solid-phase extracted DOM indicated that beach wrack releases compounds with putative mono- and oligosaccharide-, amino acid- and vitamin-type molecular formulae, which likely serve as valuable substrate for heterotrophic microorganisms. DOM from the brown seaweed Fucus sp. was more aromatic than seawater DOM and even beach wrack of terrestrial origin, probably from structural components and secondary metabolites such as phlorotannins. We conclude that DOM and nutrient release from beach wrack strongly depends on wrack type and leaching medium, may obscure molecular provenance proxies (e.g., terrestrial indices), and adds a nutritional boost to infiltrating sea- and rainwater which likely impact microbial respiration rates in the STE.

A comprehensive molecular phylogeny of the terrestrial Parasitengona (Acariformes, Prostigmata) provides insights into the evolution of their metamorphosis, invasion into aquatic habitats and classification

Parasitengona (velvet mites, chiggers and water mites) is a highly diverse and globally distributed mite lineage encompassing over 11,000 described species, inhabiting terrestrial, freshwater and marine habitats. Certain species, such as chiggers (Trombiculidae), have a great medical and veterinary importance as they feed on their vertebrate hosts and vector pathogens. Despite extensive previous research, the classification of Parasitengona is still contentious, particularly regarding the boundaries between superfamilies and families, exacerbated by the absence of a comprehensive phylogeny. The ontogeny of most Parasitengona is distinct by the presence of striking metamorphosis, with parasitic larvae being heteromorphic compared to the predatory free-living deutonymphs and adults. The enigmatic superfamily Allotanaupodoidea is an exception, with larvae and active post-larval stages being morphologically similar, suggesting that the absence of metamorphosis may be either an ancestral state or a secondary reversal. Furthermore, there is disagreement in the literature on whether Parasitengona had freshwater or terrestrial origin. Here, we inferred phylogenetic relationships of Parasitengona (89 species, 36 families) and 307 outgroups using five genes (7,838 nt aligned). This phylogeny suggests a terrestrial origin of Parasitengona and a secondary loss of metamorphosis in Allotanaoupodoidea. We recovered the superfamily Trombidioidea (Trombidioidea sensu lato) as a large, well-supported, higher-level clade including 10 sampled families. We propose a new classification for the terrestrial Parasitengona with three new major divisions (epifamilies) of the superfamily Trombidioidea: Trombelloidae (families Audyanidae, Trombellidae, Neotrombidiidae, Johnstonianidae, Chyzeriidae); Trombidioidae (Microtrombidiidae, Neothrombiidae, Achaemenothrombiidae, Trombidiidae, Podothrombiidae); and Trombiculoidae (=Trombiculidae sensu lato). Adding them to previously recognized superfamilies Allotanaupodoidea, Amphotrombioidea, Calyptostomatoidea, Erythraeoidea, Tanaupodoidae and Yurebilloidae.

Dynamics and source characterization of chromophoric dissolved organic matter (CDOM) in a tropical monsoon driven lagoon

While there is a significant body of research on the dynamics of chromophoric dissolved organic matter (CDOM) in coastal and offshore waters, our understanding of CDOM dynamics in tropical inland water bodies remains limited. To bridge this knowledge gap, a monthly in-situ investigation was carried out at 33 stations along a monsoon driven lagoon, Chilika, on the southeast coast of India for one year i.e., from July 2018 to June 2019. CDOM absorption at 440 nm [aCDOM(440)] data were analyzed as a proxy for CDOM concentration which varied between a range of 0.04–65.14 m−1 with an average value of 2.77 ± 5.23 m−1. A gradient in aCDOM(440) was observed from the river discharge dominated shallower northern sector (4.91 ± 8.32) m−1 to the more isolated and less fresh water influenced deeper southern sector (1.21 ± 1.55) m−1. Spectral slope (S), spectral slope ratio (SR), and molecular weight proxy (M) were computed to understand the possible source and fate of CDOM in the lagoon. The average spectral slope of S280–500 and S350–500 vary between 0.002 and 0.096 nm−1 and 0.001–0.095 nm−1, respectively. The (SR) and (M) values ranged between of 0.01–6.81 and 0.31–52.28. It was observed that large-sized, high molecular weight CDOM from terrestrial origin was prevalent during monsoon with lower (S280–500), (SR), and (M)values. In contrast, lower molecular weight CDOM fractions were prevalent during pre- and post-monsoon which were mainly of autochthonous origin with higher (S350–500), (SR), and (M) values. Our findings indicate significant spatio-temporal variations of CDOM in Chilika Lagoon, influenced by the monsoon-driven influx of freshwater and the mixing of fresh and marine water. In-situ changes in CDOM are likely shaped by microbial breakdown and photodegradation.

Quantifying Biogeochemical Controls of Open Ocean CDOM From a Global Mechanistic Model

AbstractChromophoric dissolved organic matter (CDOM) is an important part of ocean carbon biogeochemistry with relevance to long‐term observations of ocean biology due to its dominant light absorption properties. Thus, understanding the underlying processes controlling CDOM distribution is important for predicting changes in light availability, primary production, and the cycling of biogeochemically important matter. We present a biogeochemical CDOM model for the open ocean with two classes of biological lability and uncertainty estimates derived from 43 ensemble members that provide a range of model parameter variations. Ensemble members were optimized to match global ocean in situ CDOM measurements and independently assessed against satellite CDOM estimates, which showed good agreement in spatial patterns. Based on the ensemble median, we estimate that about 7% of open‐ocean CDOM is of terrestrial origin, but the ensemble range is large (<0.1–26%). CDOM is rapidly removed in the surface ocean (<200 m) due to biological degradation for short‐lived CDOM and photodegradation for long‐lived CDOM, leading to a net flux of CDOM to the surface ocean from the dark ocean. This deep‐water source (ensemble median 0.001 m−1 yr−1) is similar in magnitude to the riverine flux (0.005 m−1 yr−1) into the surface ocean. Though discrepancies between the model and observational data remain, this work serves as a foundational framework for a mechanistic assessment of global CDOM distribution that is independent of satellite data.

Impact of mineral reactions and surface complexation on the transport of dissolved species in a subterranean estuary: Application of a comprehensive reactive transport modeling approach

Subterranean estuaries (STE) are hotspots of biogeochemical reactions. Here, dissolved constituents in waters of terrestrial and marine origin are transformed before they discharge to the coastal oceans. The involved biogeochemical reactions are complex and non-linear, calling for the application of numerical reactive transport modeling (RTM) to improve the process understanding. The aim of this study was to assess the roles of organic matter degradation and coupled secondary mineral reactions for the fate of dissolved species in STEs of sandy beaches. A comprehensive RTM approach was applied for this purpose, accounting for the effects of ion activities, pH, pe, redox reactions, mineral equilibria (calcite, goethite, siderite, iron sulfide, hydroxyapatite and vivianite) as well as surface complexation. Results show that the STE biogeochemistry and associated species fluxes are very sensitive to the assumed reaction network. For example, inorganic carbon and pH were largely controlled by calcite and siderite dynamics, and dissolved Fe2+ and HS- were precipitated as goethite, siderite and/or iron sulfides. Moreover, PO43- concentrations were affected by both the formation of vivianite or hydroxyapatite as well as surface complexation. This work helped to establish the relative importance of some of the major biogeochemical processes in the STE. However, further field studies are needed to understand which processes play a role in real-world STEs, including an exploration of the deep subsurface of STEs. Such field-based observations will improve our conceptual process understanding, which is key to developing well-constrained RTMs.

Photochemical reactivity of dissolved organic carbon in subarctic lakes along a color gradient

ABSTRACT Lake–atmosphere carbon exchanges can be significantly affected by photochemical dissolved organic matter (DOM) mineralization. However, our understanding of how increasing allochthonous organic carbon input affects the photoreactivity of DOM per unit of absorbed incoming light is incomplete. Here, we measured the absorption of ultraviolet (UV) light and subsequent photochemical DOM decay in 148 lakes within the subarctic region of Abisko, Sweden. These lakes range from brown-water lakes with allochthonous input from mires to tundra clear-water lakes with relatively more autochthonous input. We used fluorescence excitation–emission matrix analysis to assess the DOM chemical composition to determine how increasing colored DOM (CDOM) affects photomineralization. We found that the photo decay rates in absolute values were positively correlated to CDOM. However, the photo decay per unit of absorbed light energy did not increase with increasing CDOM; rather, it showed a weak decreasing trend. Fluorescence analyses helped explain these patterns; humic-like fluorescent DOM, presumably of terrestrial origin, was associated with high absolute photo decay rates, but not generally with higher photoreactivity per unit of absorbed light energy than other types of DOM. The results suggest that even though increasing inputs of terrestrial substances lead to a higher abundance of photodegradable materials, CO2 emissions do not necessarily increase in lakes where browning limits the ability of light to penetrate deeper water.

Chemometric-based drug discovery approaches from natural origins using hyphenated chromatographic techniques.

Isolation and characterization of bioactive components from complex matrices of marine or terrestrial biological origins are the most challenging issues for natural product chemists. Biochemometric is a new potential scope in natural product analytical science, and it is a methodology to find the compound's correlation to their bioactivity with the help of hyphenated chromatographic techniques and chemometric tools. The present review aims to evaluate the application of chemometric tools coupled to chromatographic techniques for drug discovery from natural resources. The searching keywords "biochemometric," "chemometric," "chromatography," "natural products bioassay," and "bioassay" were selected to search the published articles between 2010-2023 using different search engines including "Pubmed", "Web of Science," "ScienceDirect," and "Google scholar." An initial stage in natural product analysis is applying the chromatographic hyphenated techniques in conjunction with biochemometric approaches. Among the applied chromatographic techniques, liquid chromatography (LC) techniques, have taken up more than half (53%) and also, mass spectroscopy (MS)-based chromatographic techniques such as LC-MS are the most widely used techniques applied in combination with chemometric methods for natural products bioassay. Considering the complexity of dataset achieved from chromatographic hyphenated techniques, chemometric tools have been increasingly employed for phytochemical studies in the context of determining botanicals geographical origin, quality control, and detection of bioactive compounds. Biochemometric application is expected to be further improved with advancing in data acquisition methods, new efficient preprocessing, model validation and variable selection methods which would guarantee that the applied model to have good prediction ability in compound relation to its bioactivity.