Taxonomic Patterns Research Articles

Preliminary Assessment of Macrobenthos Associated with Red Coral Corallium rubrum (Linnaeus, 1758) Populations in the Northeastern Ionian Sea

The taxonomic composition, structure, and distribution patterns of the macrobenthos associated with Corallium rubrum were studied along the coast of Taranto (Ionian Sea), together with the main features of their red coral population. Underwater video transects were performed by professional divers at three sites in correspondence with coralligenous formations at depths from 50 to 65 m. The results revealed a patchy distribution of red coral, with colonies predominantly located in cavities on sub-vertical cliffs and large boulders. Biometric analysis indicated that young colonies predominated at all sites, while older colonies were lacking, likely because of illegal harvesting. The lower density values were recorded at S1, while S2 and S3 presented higher values. A total of 76 taxa were recorded. S1, the shallowest site, showed a prevalence of calcareous algae, while S2 and S3 showed a greater abundance of filter-feeding invertebrates (Porifera and Cnidaria) with the highest presence of Porifera at S3. The results emphasize the heterogeneity of the macrobenthos together with the high vulnerability of the red coral population, highlighting the necessity of site-specific conservation strategies to contribute to the conservation and management of benthic ecosystems in the northern Ionian Sea.

Reptile Diversity Patterns Under Climate and Land Use Change Scenarios in a Subtropical Montane Landscape in Mexico

ABSTRACTAimMountainous regions are rich in reptile biodiversity but face threats from climate and land use changes. Understanding how these factors affect reptile diversity in these regions can highlight key conservation hotspots that require effective conservation actions. Here, we explored reptile taxonomic and functional diversity patterns along the Sierra Madre del Sur region in southeast Mexico, and potential changes in future years caused by different climate and land use change scenarios.LocationSierra Madre del Sur, México.TaxonReptiles.MethodsWe used species distribution models and information on species traits to estimate taxonomic and functional diversity throughout the Sierra Madre del Sur (SMS) region under current and future climate and land use change scenarios.ResultsGreater taxonomic and functional diversity was observed in both temperate and tropical forests. Taxonomic diversity was higher in more drier areas at high elevations while higher functional diversity was observed in wetter areas at intermediate‐to‐high elevations. Lower diversity for both dimensions was associated with anthropic land uses. In future scenarios, both dimensions of diversity are expected to increase in temperate forest in highlands of central Oaxaca and decrease in the southcentral portion of the SMS, particularly for the worst scenarios due to increased deforestation rates.Main ConclusionsHigher taxonomic diversity in more drier areas at high elevations could be due to historical and evolutionary factors, while higher functional diversity in wetter areas at intermediate‐to‐high elevations may be explained by a higher environmental heterogeneity in forests within these conditions. Larger diversity losses in the southcentral portion of the SMS are probably due to larger predicted deforestation rates in those areas. Our results are valuable not just for informing conservation actions, such as the creation of protected natural areas but also to understand the underlying processes behind the patterns of reptile diversity.

Advancing Maternal Transfer of Organic Pollutants across Reptiles for Conservation and Risk Assessment Purposes.

Embryonic exposure through maternally transferred pollutants can affect embryo vitality, survival, and health. Reptiles face global declines and are sensitive to embryonic pollutant exposure. Yet, they are often neglected in pollution risk assessment and conservation. We analyzed maternal transfer of organic pollutants in reptiles through a systematic extraction, homogenization, and integration of published data on organic pollutants measured in mother-egg pairs into a comprehensive database (DOI:10.5281/zenodo.10900226), complemented with molecular physical-chemical properties of the pollutants. Over four decades, 17 publications provided 19,955 data points shifting from legacy to emerging contaminants although research on newer contaminants lags regulatory and societal demands. Challenges including taxonomic bias, heterogeneity in sampled tissues, and 73% of censored data complicate comparative analyses. However, significant opportunities were identified including the use of the turtle Malachlemys terrapin and snake Enhydris chinensis as flagship species where a large amount of data is available across tissues (allowing investigation into physiological relations) and compounds (allowing insights into maternal transfer across the chemical universe). Data on other freshwater and marine turtles provide the possibility of exploring taxonomic patterns in this subgroup. The analysis, integrated database, and discussion present opportunities for research in an era where science needs to achieve more with limited wildlife data.

Metagenomics Insight into Veterinary and Zoonotic Pathogens Identified in Urban Wetlands of Los Lagos, Chile.

Wetlands are ecosystems that are essential to ecological balance and biodiversity; nevertheless, human activity is a constant threat to them. Excess nutrients are caused by intensive livestock and agricultural operations, pollution, and population growth, which in turn leads to uncontrolled microbiological development. This impairment in water quality can constitute a risk to animal, human, and environmental health. To thoroughly characterize the microbial communities, shotgun metagenomics was used to characterize the taxonomic and functional pattern of microorganisms that inhabit urban wetlands in the Los Lagos Region of Chile. The main objective was to identify microorganisms of veterinary relevance, assess their potential antibiotic resistance, and characterize the main virulence mechanism. As expected, a high diversity of microorganisms was identified, including bacteria described as animal or human pathogens, such as Pasteurella multocida, Pseudomonas aeruginosa, Staphylococcus aureus, and Escherichia coli. Also, a diverse repertory of antimicrobial-resistant genes (ARGs) was detected in metagenomic assembled sequences and inside the sequence of mobile genetic elements, genes that confer mainly resistance to beta-lactams, consistent with the families of antibiotics most used in Chile. In addition, a diverse collection of virulence mechanisms was also identified. Given the significance of the relationship between environmental, animal, and human health-a concept known as One Health-there is a need to establish molecular surveillance programs that monitor the environmental biohazard elements using molecular tools. This work is the first report of the presence of these harmful biological elements in urban wetlands subjected to anthropogenic pressure, located in the south of Chile.

Research on longevity and associated age data of South American anurans: trends, gaps and recommendations

Longevity is one of the most important characteristics in the life history of organisms. It is directly associated with growth, reproduction and age of sexual maturity. Despite this, little is known about longevity in South American anuran species, a region considered as a hotspot of world diversity. Thus, we carried out a literature review of publications on longevity of South American anurans that used the skeletochronology method to identify the main publication trends, as well as to point out the main information gaps and suggest future directions. We found clear biases when we analysed temporal, spatial and taxonomic patterns in publications on longevity: (i) studies are recent (mostly from 2015 onwards), (ii) bufonids and leptodactylids were the most studied groups, (iii) medium to large species are the most studied, (iv) species with wide geographic distribution, low risk of extinction, (v) the studies are concentrated in Brazil and Argentina, and (vi) most studies are in the Chaco biogeographical sub-region. We suggest that future work prioritizes little explored families and with high species diversity, small-bodied species, with restricted distribution, threatened with extinction, in order to expand the representation of different evolutionary lineages along the biogeographical units of South America.

Expowo: An R package for mining global plant diversity and distribution data

AbstractPremiseData on plant distribution and diversity from natural history collections and taxonomic databases are increasingly becoming available online as exemplified by the Royal Botanic Gardens, Kew's Plants of the World Online (POWO) database. This growing accumulation of biodiversity information requires an advance in bioinformatic tools for accessing and processing the massive data for use in downstream science. We present herein expowo, an open‐source package that facilitates extracting and using botanical data from POWO.Methods and ResultsThe expowo package is implemented in R and designed to handle the entire vascular plant tree of life. It includes functions to readily distill taxonomic and distributional information about all families, genera, or species of vascular plants. It outputs a complete list of species in each genus of any plant family, with the associated original publication, synonyms, and distribution, and plots global maps of species richness at the country and botanical country levels, as well as graphs displaying species‐discovery accumulation curves and nomenclatural changes over time. To demonstrate expowo's strengths in producing easy‐to‐handle outputs, we also show empirical examples from a set of biodiverse countries and representative species‐rich and ecologically important angiosperm families.ConclusionsBy harnessing bioinformatic tools that accommodate varying levels of R programming proficiency, expowo functions assist users who have limited R programming expertise in efficiently distilling specific botanical information from online sources and producing maps and graphics for the further interpretation of biogeographic and taxonomic patterns.

Taxonomic and environmental significance of Poaceae and Cyperaceae phytoliths from the Northern Territory, Australia

Phytoliths are a valuable tool for reconstructing past grassy ecosystems. However, they are not commonly utilised as a palaeoecological proxy in Australia due to a lack of modern reference material from plants, particularly grasses. This study analyses phytolith reference material from 49 grass and 4 sedge species from the Northern Territory, Australia. This is used to develop a detailed classification scheme and multivariate morphospace analysis to examine taxonomic and ecological patterns of grass silica short cell phytolith (GSSCP) production within the Poaceae (grass) family. The results of detrended correspondence analysis show that grass subfamilies, tribes, and genera in this region can be differentiated through phytolith assemblages, and that these assemblages reflect the environmental conditions associated with various grass taxa. The developed detailed classification system and examination of co-occurrence patterns reduces redundancy of phytolith morphotypes across subfamilies, improving taxonomic and palaeoecological resolution of phytolith assemblages. Finally, based on the results of this study, a detailed scheme is presented for palaeoecological reconstructions in grassy ecosystems of northern Australia.

Exploring geography and evolutionary history as drivers of variation in floral scent chemistry in western sessile-flowered Trillium using parsimony-constrained phylogenetics.

The sessile-flowered Trillium species from western North America have been challenging to distinguish morphologically due to overlapping characters and intraspecific variation. Molecular phylogenetic analyses, currently inconclusive for this group, have not sampled multiple populations of the different species to account for this. Here, we query the diversity of floral volatile composition to understand its bearings on the taxonomy, distribution and evolution of this group. We explored taxonomic and geographic patterns in average floral volatile composition (105 different compounds) among 42 wild populations of four sessile-flowered Trillium species and the outgroup, Pseudotrillium, in California, Oregon and Washington by means of parsimony-constrained phylogenetic analyses. To assess the influence of character construction, we coded compound abundance in three different ways for the phylogenetic analyses and compared the results with those of statistical analyses using the same dataset and previously published statistical analyses. Different codings of floral volatile composition generated different phylogenetic topologies with different levels of resolution. The different phylogenies provide similar answers to taxonomic questions but support different evolutionary histories. Monophyly of most populations of each taxon suggests that floral scent composition bears phylogenetic signal in the western sessile-flowered Trillium. Lack of correlation between the distribution of populations and their position in scent-based phylogenies does not support a geographic signal in floral scent composition. Floral scent composition is a valuable data source for generating phylogenetic hypotheses. The way scent composition is coded into characters is important. The phylogenetic patterns supported by floral volatile compounds are incongruent with previously reported phylogenies of the western sessile-flowered Trillium obtained using molecular or morphological data. Combining floral scent data with gene sequence data and detailed morphological data from multiple populations of each species in future studies is needed for understanding the evolutionary history of western sessile-flowered Trillium.

Time since fire as a driver of taxonomic and phylogenetic patterns of grassland plant communities

Fire plays a key role in grasslands, determining the distribution and evolution of species and boundaries with neighboring ecosystems. Evidence of community-wide responses to fire is largely based on taxonomic and functional descriptors, while the phylogenetic dimension is overlooked. Here we evaluated how the taxonomic and phylogenetic structure of grassland plant communities responded to a time since fire (TSF) gradient. We sampled 12 communities in Southern Brazil under varying TSF and calculated taxonomic species richness (S) and dominance (D), phylogenetic diversity (PD), and mean phylogenetic distances (MPD). We used Structural Equation Models to test the relationships between the environmental gradient and community descriptors. Communities with longer TSF presented higher PD and MPD but lower species richness and increased taxonomic dominance. These sites were dominated by monocots, specifically C4 grasses, but also presented exclusive clades, whereas recently-burned sites presented lower taxonomic dominance and more species distributed in a wider variety of clades. Our results indicate that these scenarios are interchangeable and dependent on fire management. Fire adaptation was not constrained by phylogenetic relatedness, contrasting with previous findings for tropical savannahs and indicating that temperate and tropical non-forest ecosystems from South America respond differently to fire, possibly due to different evolutionary histories.

A novel framework to generate plant functional groups for ecological modelling

An effective way to reduce complexity in ecological modelling is by grouping species that share similar characteristics into functional groups or types. Often, the creation of plant functional groups (PFGs) is carried out for each case study in an ad-hoc way using a small set of traits. This limits the transferability of these PFGs to other geographical areas or study systems. We propose a novel generic framework to generate PFGs that considers the most important ecological dimensions, is applicable to case studies globally, and that emerges from patterns of functional redundancy across species. Based on most relevant and measured plant characteristics, we designed a multi-step process that includes: i) data harmonisation and missing values imputation; ii) species clustering based on multiple characteristics encompassing the main ecological dimensions featured in plant community ecological models (i.e., dispersal, competition, and demography) and iii) the combination of ecological dimension-specific groups into comprehensive PFGs. We demonstrate this framework by applying it to a global dataset of plant characteristics including a functional traits dataset and a plant-soil co-occurrence dataset for 19,102 species. Lastly, to test the ability of generated PFGs to summarise species’ functional variation within plant communities, we correlate taxonomical and functional diversity indices calculated at the species and at the PFGs level across a global dataset of plant communities (sPlotOpen). Our framework generated 465 global, robust data-driven PFGs with non-overlapping combinations of traits for each ecological dimension divided by growth form. The validation returned positive correlation values between PFGs and species-level diversity metrics, supporting the ability of the obtained PFGs to capture functional and taxonomic diversity patterns across a variety of plant communities worldwide. The framework allows for the easy integration of newly available species characteristics data. The obtained global PFGs, covering all main known ecological processes and environmental conditions at small resolution, can increase the predictive power and accuracy of process-based models and help furthering varying-scale ecological studies.

Avian influenza viruses in wild birds in Canada following incursions of highly pathogenic H5N1 virus from Eurasia in 2021-2022.

We present the results of Canada's Interagency Surveillance Program for Avian Influenza in Wild Birds in the year following the first detection of highly pathogenic avian influenza virus (HPAIV) H5N1 on the continent. The surveillance program tested over 17,000 wild birds, both sick and apparently healthy, which revealed spatiotemporal and taxonomic patterns in HPAIV prevalence and mortality across Canada. The significant shift in the presence and distribution of HPAIV in Canada's wild birds underscores the need for sustained investment in wild bird surveillance and collaboration across One Health partners.

Taxonomic and Functional Diversity of Reptiles in a Heterogeneous Landscape of Jalisco State, West-Central Mexico

Reptiles are threatened by anthropogenic landscape transformation, largely due to agriculture. However, ecosystems nowadays constitute a matrix of fragmented landscapes. We analyzed a heterogeneous landscape’s reptile taxonomic and functional diversity patterns across ten land cover/use types in Jalisco state, in west-central Mexico. At the alpha diversity level, we assessed the taxonomic diversity using q-order indices, and functional diversity with multidimensional indices (FRic, FDiv, and FEve) by land cover/use. We evaluated the differences in species composition among land cover/use types (beta diversity). We utilized multidimensional distance-based analyses (dbRDA) to evaluate the association between reptile diversity, habitat structure, and environmental variables. Species richness did not correlate with functional richness across land cover types overall, except for riparian habitat surrounded by crops (RH-C), which exhibited higher species richness and functional diversity. Secondary vegetation surrounded by temperate forest (SV-TF), riparian habitat surrounded by tropical dry forest (RH-TDF), and RH-C were the land cover/use types with the most functional groups. Herbaceous cover is crucial for preserving both reptile diversity facets in this landscape. These findings suggest that the availability of resources (e.g., riparian habitat and herbaceous cover) regardless of perturbation level could be more relevant for reptile diversity than the condition (tropical vs. temperate) due to the high plasticity and adaptation of the group. It is essential to recognize the ecological value of these habitats by adopting a holistic approach that values the intrinsic and ecological importance of reptile diversity.

Distribution and historical aspects of Brazilian Stachytarpheta (Verbenaceae): Exploring a comprehensive dataset of taxonomically verified specimens

Stachytarpheta (Verbenaceae) encompasses approximately 120 species distributed throughout tropical and subtropical regions of the Americas, with Brazil boasting the highest species richness (90 spp.) and endemism (82 spp.). This study introduces an updated, taxonomically revised, and credible occurrence dataset focusing on Stachytarpheta species in Brazil, comprising 4,843 records. This dataset results from expert revision of herbarium collections and integration with global repositories alongside national repositories in Brazil. It facilitates a thorough exploration of the temporal, geographical, and taxonomic patterns of Stachytarpheta across diverse regions and landscapes in Brazil. Stachytarpheta species and their occurrence records are concentrated in the states of Minas Gerais, Bahia, and Goiás, particularly in the campo rupestre and savanna formations of the Espinhaço Range and Chapada dos Veadeiros. Analysis of potential biases within our dataset revealed a correlation between specimen occurrences and proximity to roads. Rarefaction curves indicate ongoing potential for species discovery within the Cerrado and Caatinga domains, with the Tocantins state emerging as a particularly promising area for novel findings; therefore, presenting opportunities for exploration. The majority of the specimens are housed in Brazilian herbaria, particularly at RB, HUEFS, and CESJ. Temporal analysis of occurrence records showed an upward trend during the 20th century and the first decade of the 21st century, which can be attributed to the efforts of generalist collectors working mostly in Eastern and Central Brazil. Most collection efforts were carried out through Brazilian and European initiatives, often supported by local funding, especially during the mid-20th century. However, funding for scientific initiatives in Brazil has waned since the mid-2010s, potentially affecting recent trends in species recording. Our dataset serves as a resource enabling subsequent analysis delving into the systematics, biogeography, and conservation of this remarkable genus from open vegetation formations in Brazil.

Deciphering taxonomic and functional patterns of microbial communities associated with the tiger tail seahorse (Hippocampus comes).

Gaining insight into the diversity, structure, and metabolic functions of microbial communities is essential for understanding their roles in host health and ecosystem dynamics. However, research on the seahorse-associated microbiome remains limited, despite these threatened fish facing increasing human pressures worldwide. Here, we explored the microbial diversity and metabolic functions of the skin and gut of the tiger tail seahorse (Hippocampus comes) and its surrounding environment using shotgun metagenomics and bioinformatics. Members of the Pseudomonadota phylum were dominant in the skin microbiome, whereas Bacteroidota was dominant in the gut. Bacillota, Actinomycetota, and Planctomycetota were also detected in the seahorse-associated microbiome. Statistical analysis revealed significant differences (P < 0.01) in species diversity between skin and gut microbiomes, with members belonging to the Moraxellaceae family being dominant on the skin and the Bacteroidaceae family in the gut. Moreover, the surrounding environment (water or sediment) did not have a direct effect on the seahorse microbiome composition. The skin microbiome exhibited a higher abundance of functional genes related to energy, lipid, and amino acid metabolism as well as terpenoids and polyketides metabolism, xenobiotics biodegradation, and metabolism compared with the gut. Despite differences among classes, the total abundance of bacteriocins was similar in both gut and skin microbiomes, which is significant in shaping microbial communities due to their antimicrobial properties. A better knowledge of seahorse microbiomes benefits conservation and sustainable aquaculture efforts, offering insights into habitat protection, disease management, and optimizing aquaculture environments, thereby promoting seahorse health and welfare while minimizing environmental impact and enhancing aquaculture sustainability.NEW & NOTEWORTHY To the best of our knowledge, this study represents the first comprehensive examination of the taxonomic and functional patterns of the skin and gut microbiome in the tiger tail seahorse. These findings have the potential to significantly enhance our understanding of the seahorse-associated microbiome, thereby contributing to the prediction and control of bacterial infections in seahorses, which are a leading cause of high mass mortality rates in seahorse aquaculture and other fish species.

Fleas (Siphonaptera) of Gerbils in the Caucasus

Representatives of the gerbil subfamily (Gerbillinae) are the main components of biocenoses in deserts and semi-deserts. They are the hosts of many flea species and the main vectors of the causative plague agent in a number of natural plague foci. The taxonomic diversity, distribution pattern and host-parasite relationships of flea species noted as parasites of gerbils in the Caucasus are analyzed. Gerbils and their fleas entered the Caucasus from southwest Asia in the Pliocene in parallel to the migration of floral psammophilic complexes. In the Holocene, semi-desert and desert Turanian plants were introduced from the northeast to the Pre-Caucasus, and the fauna of gerbils and their fleas was replenished with several species and subspecies. In accordance with the settlement of carriers and vectors, sandy natural plague foci in Transcaucasia could have existed already in the Pliocene, and in the Pre-Caucasus they were formed no earlier than the Holocene.

Shotgun Metagenomics Reveals Taxonomic and Functional Patterns of the Microbiome Associated with Barbour's Seahorse (Hippocampus barbouri).

This study aimed to investigate the taxonomic and functional patterns of the microbiome associated with Barbour's seahorse (Hippocampus barbouri) using a combination of shotgun metagenomics and bioinformatics. The analyses revealed that Pseudomonadota and Bacillota were the dominant phyla in the seahorse skin microbiome, whereas Pseudomonadota and, to a lesser extent, Bacillota and Bacteroidota were the dominant phyla in the seahorse gut microbiome. Several metabolic pathway categories were found to be enriched in the skin microbiome, including amino acid metabolism, carbohydrate metabolism, cofactor and vitamin metabolism, energy metabolism, nucleotide metabolism, as well as membrane transport, signal transduction, and cellular community-prokaryotes. In contrast, the gut microbiome exhibited enrichment in metabolic pathways associated with the metabolism of terpenoids and polyketides, biosynthesis of other secondary metabolites, xenobiotics biodegradation and metabolism, and quorum sensing. Additionally, although the relative abundance of bacteriocins in the skin and gut was slightly similar, notable differences were observed at the class level. Specifically, class I bacteriocins were found to be more abundant in the skin microbiome, whereas class III bacteriocins were more abundant in the gut microbiome. To the best of our knowledge, this study represents the first comprehensive examination of the taxonomic and functional patterns of the skin and gut microbiome in Barbour's seahorse. These findings can greatly contribute to a deeper understanding of the seahorse-associated microbiome, which can play a pivotal role in predicting and controlling bacterial infections, thereby contributing to the success of aquaculture and health-promoting initiatives.

Metropolitan pressures: Significant biodiversity declines and strong filtering of functional traits in fish assemblages

Accelerating global urbanization is leading to drastic losses and restructuring of biodiversity. Although it is crucial to understand urban impacts on biodiversity to develop mitigation strategies, there is a dearth of knowledge on the functional structure of fish assemblages spanning the entire city-scale spectrum of urbanization intensity. Here, using environmental DNA sampled from 109 water sites in Beijing, we investigated the taxonomic and functional diversity patterns of fish assemblages across the city and uncovered community-, trait-, and species-level responses to various environmental stressors. By ranking sampling sites into three disturbance levels according to water physiochemical and landcover conditions, we found that both native and non-native fish taxonomic and functional α-diversity decreased significantly with elevating disturbance, as strong disturbance led to the disappearance of many species. However, the quantitative taxonomic and functional β-diversity components of native and non-native fish showed distinct patterns; assemblage turnover dominated native fish β-diversity and decreased with increasing disturbance, whereas species/trait richness differences dominated non-native fish β-diversity and increased with disturbance intensity particularly in lotic waters. RLQ and fourth-corner analyses revealed that fish size, fecundity, diet, and reproductive behaviors were significantly correlated with water quality, with pollution-tolerant, larger-sized native and omnivorous non-native fishes being urban winners, which indicates strong trait-dependent environmental filtering. Potential ecological indicator species were identified based on the sensitivity of fish responses to pollution loads; these were mostly small native species, and many have bivalve-dependent reproduction. Our results demonstrate that, along with native fish assemblage simplification and homogenization, urban stressors exert profound impacts on community trait composition, highlighting the need to consider both biodiversity loss and functional reorganization in combating disturbance of aquatic ecosystems under global urbanization. Furthermore, correlations between cropland cover and water nutrient level suggested that the management of agricultural runoff might be critically important for safeguarding urban water quality.

Wetland biodiversity in Aotearoa New Zealand: an eDNA perspective on exotic and non-exotic species

ABSTRACT Invasive species threaten biodiversity in Aotearoa New Zealand. In wetlands − significant sites that provide an array of ecosystem and cultural services but represent <10% of their original extent − invasive species can affect hydrological function, nutrient regimes and overall ecological functionality. Environmental DNA (eDNA) has emerged as a valuable biomonitoring technique for cataloguing biodiversity and detecting biological incursions, but little is known about how biodiversity varies in wetlands over fine and broad spatial scales. Here, we examined the publicly available eDNA database of Wilderlab New Zealand, retrieving data from 26 sites across the country to characterise taxonomic diversity patterns, including the extent of exotic and non-exotic (native and endemic) species. We found significant spatial variation in biodiversity – even among neighbouring sites – and a pattern whereby all sites had ≥50% exotic species in their total species tally. Our results provide new information on the current state of wetland biodiversity in Aotearoa New Zealand and highlight the value of eDNA databases for generating new insights from publicly shared data. They also emphasise an urgent need for greater resource allocation to conservation and restoration initiatives in Aotearoa New Zealand that will ensure the persistence of treasured native and endemic wetland species.

The Promise of a Pointillist Perspective for Comparative Immunology.

Most studies in comparative immunology involve investigations into the detailed mechanisms of the immune system of a nonmodel organism. Although this approach has been insightful, it has promoted a deep understanding of only a handful of species, thus inhibiting the recognition of broad taxonomic patterns. Here, we call for investigating the immune defenses of numerous species within a pointillist framework, that is, the meticulous, targeted collection of data from dozens of species and investigation of broad patterns of organismal, ecological, and evolutionary forces shaping those patterns. Without understanding basic immunological patterns across species, we are limited in our ability to extrapolate and/or translate our findings to other organisms, including humans. We illustrate this point by focusing predominantly on the biological scaling literature with some integrations of the pace of life literature, as these perspectives have been the most developed within this framework. We also highlight how the more traditional approach in comparative immunology works synergistically with a pointillist approach, with each approach feeding back into the other. We conclude that the pointillist approach promises to illuminate comprehensive theories about the immune system and enhance predictions in a wide variety of domains, including host-parasite dynamics and disease ecology.

Taxonomic distinctness and diversity patterns of a polychaete (Annelida) community on the continental shelf of the Southern Gulf of Mexico.

The spatial patterns of taxonomic diversity of annelid polychaete species from the continental shelf in the Southern Gulf of Mexico were examined in this study. We used taxonomic distinctness and its spatial variations to explore the diversity patterns and how they change between Southern Gulf of Mexico regions. In addition, using taxonomic distinctness as a dissimilarity measure and Ward's Clustering, we characterized three distinct faunal assemblages. We also investigated patterns of richness, taxonomic distinctness, and distance decay of similarity between sampling stations as a ß-diversity measure. Finally, we examined the spatial relationships between polychaete assemblages and environmental variables to test the relative importance of spatial and environmental components in annelid polychaete community structure from the Southern Gulf of Mexico. We used a combination of eigenvector-based multivariate analyses (dbMEMs) and distance-based redundancy analysis (dbRDA) to quantify the relative importance of these explanatory variables on the spatial variations of taxonomic distinctness. The significance level of spatial and environmental components to the distribution of polychaete species showed that the combined effect of spatial processes and sediment characteristics explained a higher percentage of the variance than those parameters could alone.