Sustainable Cocoa production practices should be investigated comprehensively to address sustainability requirements and mitigate Cocoa production issues in Indonesia. This study aims to identify the sustainable Cocoa production system considering the environmental, economic, and social impacts. Life cycle framework and multicriteria decision-making (MCDM) were integrated to obtain the study's objectives by comparing Cocoa monocropping system (CM) and Cocoa intercropping systems (IC). The result indicated that in the environmental sustainability aspect, the monocropping system (CM) showed higher performance as indicated by the lower environmental impact in all indicators; for example, CM emitted a lower Global Warming Potential (GWP) that has a lower margin of 34.5–55.9 % compared to the intercropping system (IC-I and IC-II). In the economic aspect, both on the short-term and long-term analysis, the Cocoa intercropping system (IC-II) generated higher value-added and economic feasibility, with a higher profit margin of 150–205 % compared to CM and IC-1. Along with the increase of economic benefits in IC II, this system also significantly provides social benefits, as presented by the higher social index margin of 4.9–23.7 % compared to other systems. Furthermore, by applying decision-making analysis, the result determines the highest index on the Cocoa intercropping system II (IC-II). These findings highlight that applying the intercropping system II is recommended to overcome the cocoa issue at the farmer and decision-maker levels. Additionally, the proposed method that combined LCA-MCDM can be applied to another agricultural commodity to achieve sustainable agriculture production.