Sundarban Wetland Research Articles

Delving into the lifestyle of Sundarban Wetland resident, biofilm producing, halotolerant Salinicoccus roseus: a comparative genomics-based intervention

BackgroundMicrobial community played an essential role in ecosystem processes, be it mangrove wetland or other intertidal ecologies. Several enzymatic activities like hydrolases are effective ecological indicators of soil microbial function. So far, little is known on halophilic bacterial contribution and function on a genomic viewpoint of Indian Sundarban Wetland. Considering the above mentioned issues, the aims of this study was to understand the life style, metabolic functionalities and genomic features of the isolated bacterium, Salinicoccus roseus strain RF1H. A comparative genome-based study of S. roseus has not been reported yet. Henceforth, we have considered the inclusion of the intra-species genome comparison of S. roseus to gain insight into the high degree of variation in the genome of strain RF1H among others.ResultsSalinicoccus roseus strain RF1H is a pink-red pigmented, Gram-positive and non-motile cocci. The bacterium exhibited high salt tolerance (up to 15% NaCl), antibiotic resistance, biofilm formation and secretion of extracellular hydrolytic enzymes. The circular genome was approximately 2.62978 Mb in size, encoding 574 predicted genes with GC content 49.5%. Presence of genomic elements (prophages, transposable elements, CRISPR-Cas system) represented bacterial virulence and multidrug-resistance. Furthermore, genes associated with salt tolerance, temperature adaptation and DNA repair system were distributed in 17 genomic islands. Genes related to hydrocarbon degradation manifested metabolic capability of the bacterium for potential biotechnological applications. A comparative pangenome analysis revealed two-component response regulator, modified C4-dicarboxylate transport system and osmotic stress regulated ATP-binding proteins. Presence of genes encoding arginine decarboxylase (ADC) enzyme being involved in biofilm formation was reported from the genome. In silico study revealed the protein is thermostable and made up with ~ 415 amino acids, and hydrophilic in nature. Three motifs appeared to be evolutionary conserved in all Salinicoccus sequences.ConclusionThe first report of whole genome analysis of Salinicoccus roseus strain RF1H provided information of metabolic functionalities, biofilm formation, resistance mechanism and adaptation strategies to thrive in climate-change induced vulnerable spot like Sundarban. Comparative genome analysis highlighted the unique genome content that contributed the strain’s adaptability. The biomolecules produced during metabolism are important sources of compounds with potential beneficial applications in pharmaceuticals.

Statistical optimisation of esterase from Salinicoccus roseus strain RF1H and its potential application in synthetic dye decolorisation

Halophilic bacteria isolated from Indian Sundarban Wetland, identified as Salinicoccus roseus strain RF1H, were screened for extracellular esterase production. Media components for esterase production under submerged fermentation were optimised using Plackett–Burman Design followed by Box-Behnken Design of Response Surface Methodology (RSM) at pH 4.0, 3.5 g/L of MgSO4, and tributyrin concentration of 1(%v/v). The regression model was significant with a determination coefficient (R 2) value of 0.826. Using RSM, the experimental value of maximum enzyme activity (2.442 UmL−1) was 1.35 fold increased. The kinetic parameters K m and V max for hydrolysis of p-nitrophenyl acetate were 9.98 mM and 2.26 µmol/min/mg respectively, establishing a high affinity for the substrate. Further, the enzyme conferred promising results in decolorisation of synthetic dyes -Malachite Green, Congo Red, Brilliant Yellow, and Orange G. Molecular docking was used to investigate the binding pockets of the esterase, enzyme-ligand interactions, and amino acids which played a key role in dye decolorisation. Docking score results and decolorisation percentage were found in good agreement. This is the first report on the biotransformation of synthetic dyes to non-toxic products using esterase from Salinicoccus roseus.

Surveillance of plasticizers, bisphenol A, steroids and caffeine in surface water of River Ganga and Sundarban wetland along the Bay of Bengal: occurrence, sources, estrogenicity screening and ecotoxicological risk assessment

The transboundary River Ganga serves as a conduit for meltwater from the Himalayas and is a major freshwater source for two thirds of Indian population before emptying into the Sundarban Delta, the largest estuary in the Bay of Bengal. Endocrine disrupting compounds (EDCs) such as phthalic acid esters (PAEs) and bisphenol A (BPA) used as organic plastic additives can pollute the aquatic environment receiving plastic litter. Hence, we have investigated these EDCs in water samples from Ganga and Sundarban wetland of India. Since these compounds exhibit estrogenic potential, we have further measured steroids and evaluated the estrogenic activity (estradiol equivalents, BioE2Eqs) using an in-vitro bioassay (E-Screen). Further BioE2Eqs were compared with the sum of predicted estradiol equivalents based on the chemical concentrations of PAEs and BPA by E-Screen (ChemE2Eq) and YES factors (ChemYES). Caffeine was measured as a marker for anthropogenic wastewater discharge. Results showed that the highest BioE2Eq (below the lowest observable effect of E2 on fish) was associated with sites having sewer outfalls in the middle stretch of the river, and concomitantly coinciding with the elevated concentrations of caffeine. Neither ChemE2Eq nor ChemYES correlated with measured BioE2Eqs. River concentrations of BPA (0.04–4.46 µg/L) and ∑7plasticizers (0.43–7.63 µg/L) were higher than BPA (0.21–2.82 µg/L) and ∑7plasticizers (0.85–2 µg/L) in the Sundarban wetland. The only steroids detected were androgens, found at four sites in Ganga (0.007 µg/L± 0.003, mean ± S.D.). The highest estimated ecotoxicological risk to aquatic insect and fish stemmed from BPA. A secondary effect, and a potential impact on human health could be reflected via fish consumption from the productive fisheries region along the lower stretch of River Ganga. Identification of areas of elevated estrogenicity, plasticizer and steroid concentrations in River Ganga can be used to design and implement interventions for the remediation of such emerging contaminants.

Bioremoval of trace metals from rhizosediment by mangrove plants in Indian Sundarban Wetland

The study accentuated the trace metal accumulation and distribution pattern in individual organs of 13 native mangrove plants along with rhizosediments in the Indian Sundarban Wetland. Enrichment of the essential micronutrients (Mn, Fe, Zn, Cu, Co, Ni) was recorded in all plant organs in comparison to non-essential ones, such as Cr, As, Pb, Cd, Hg. Trunk bark and root/pneumatophore showed maximum metal accumulation efficiency. Rhizosediment recorded manifold increase for most of the trace metals than plant tissue, with the following descending order: Fe>Mn>Zn>Cu>Pb>Ni>Cr>Co>As>Cd>Hg. Concentrations of Cu, Ni, Pb and Hg were found to exceed prescribed sediment quality guidelines (SQGs) indicating adverse effect on adjacent biota. Both index of geoaccumulation (Igeo) and enrichment factor (EF) also indicated anthropogenic contamination. Based on high (>1) translocation factor (TF) and bioconcentration factor (BCF) values Sonneratiaapetala and Avicenniaofficinalis could be considered as potential accumulators, of trace metals.

Ecological chaos and the choice of optimal harvesting policy

Harvested populations fluctuate because of two primary reasons: the inherent nonlinearity contained in the interactions among the constituent species and the forces of harvesting acting on the oscillatory dynamics resulting from species interactions. During the course of these fluctuations, population densities make excursions to low densities. When the ecological system executes chaotic motion, extinction-sized densities are common. Thus, it is imperative to design harvesting strategies which aim at maximizing economic gains giving due consideration to the ecological health of the concerned ecological system. The present study was designed and performed to figure out how to set harvesting strategies which optimize the economic gain. The choice of optimal harvesting policy can be made only if dynamical features of the concerned ecological system are well understood. In this paper, we have consider the temporal and spatiotemporal interactions among phytoplankton, zooplankton and fish population with Holling type II and Holling type III functional responses. We have calculated stability analysis of the model system and performed the numerical simulations for both non-spatial and spatial models to figure out the parameters that are responsible for chaotic dynamics of the model system. The temporal model system shows rich dynamics including limit cycles and chaos whereas spatial model shows different types of patterns for population distribution. In this work, we have taken the case study of Sundarban wetland ecosystem. We have carried out the analysis of maximum sustainable yield and identified the parameters that are responsible for good health of wetland ecosystem through numerical simulation results.

Uptake and Distribution of Trace Elements in Dominant Mangrove Plants of the Indian Sundarban Wetland.

Absorption, accumulation and translocation of 12 trace elements in nine dominant mangrove plants in the Indian Sundarban Wetland revealed both organ-specific and site-specific characteristics. An overall enrichment of elements was recorded in rhizosediment, exceeding the prescribed effects range-low (ER-L) of consensus based sediment quality guidelines (SQGs) for Cu and Pb. Avicennia officinalis, A. alba, Ceriops decandra and Excoecaria agallocha exhibited unique potential for accumulating Al, Cd, Co, Cr, Cu, Ni, Mn and Zn and could be considered efficient accumulators. Maximum element accumulation in trunk bark (As 6.16, Cr 49.9, Co 2.67, Cu 91.00 and Zn 85.5mg kg-1) and root/pneumatophore (Al 1000 and Fe 2430mg kg-1) was recorded. Maximum bioconcentration factor (6.23) in A. officinalis and translocation factor (17.5 for Mn) in C. decandra distinguished their phytoremediation capacity. These halophytes could be used for trace element phytoremediation in stressed sites of Sundarban.

Accumulation of Trace Metals by Mangrove Plants in Indian Sundarban Wetland: Prospects for Phytoremediation

The work investigates on the potential of ten mangrove species for absorption, accumulation and partitioning of trace metal(loid)s in individual plant tissues (leaves, bark and root/pneumatophore) at two study sites of Indian Sundarban Wetland. The metal(loid) concentration in host sediments and their geochemical characteristics were also considered. Mangrove sediments showed unique potential in many- fold increase for most metal(loid)s than plant tissues due to their inherent physicochemical properties. The ranges of concentration of trace metal(loid)s for As, Cd, Co, Cr, Cu, Fe, Hg, Mn, Ni, Pb and Zn in plant tissue were 0.006–0.31, 0.02–2.97, 0.10–4.80, 0.13–6.49, 4.46–48.30, 9.2–938.1, 0.02–0.13, 9.8–1726, 11–5.41, 0.04–7.64, 3.81–52.20 μg g −1respectively. The bio- concentration factor (BCF) showed its maximum value (15.5) in Excoecaria agallocha for Cd, suggesting that it can be considered as a high-efficient plant for heavy metal bioaccumulation. Among all metals, Cd and Zn were highly bioaccumulated in E. agallocha (2.97 and 52.2 μg g −1 respectively. Our findings suggest that the species may be classified as efficient metal trap for Cd in aerial parts, as indicated by higher metal accumulation in the leaves combined with BCF and translocation factor (TF) values.

Applications of EDXRF and INAA techniques for studying impact of industries to the environment

In this study we present quantitative elemental analysis techniques like energy dispersive X-ray fluorescence analysis and instrumental neutron activation analysis to assess the impact of industrial discharge on environment. Two cases are discussed, i.e., (a) enrichment of zinc levels in the soil (1080 ± 76 mg kg−1) and zinc uptake ranging between 628 and 40 mg kg−1 in edible plants and cereals grown in agricultural fields near an active zinc smelter, Rajasthan; (b) depth-wise distribution of Cr, Pb and other metals in the sediment core samples from Sundarban wetland, West Bengal, indicating waste discharge from tanneries and other industries.

Community structure of mesozooplankton in coastal waters of Sundarban mangrove wetland, India: A multivariate approach

Spatial and temporal distribution of community structure and seasonal distribution of mesozooplankton (MZ; 20–200μm) in the context of environmental parameters were studied in the coastal waters of Indian Sundarban wetland formed at the confluence of Hugli (Ganges) River estuary, India. The work has been aimed for better understanding of its ecological characteristics in terms of the most dominant mesozooplankton group in a tropical mesomacrotidal setting. Samples were collected from four sampling sites of different hydrodynamic set up using a ring trawl net (Hydro-Bios No. 438 700, mesh size 200μm) equipped with a calibrated flowmeter and both water and plankton samples were analyzed by standard methods. Distribution of MZ showed bimodality with two peak periods, primary peak during April coinciding with maximum number of copepod species (974ind.m−3) and the secondary one during August. Copepod was the most dominant taxon where the calanoids formed bulk of the biomass representing 33 species of 7 genera, while cyclopoids formed the next dominant group comprising 4 species of 3 genera followed by 4 monogeneric harpacticoid species. Results of correlation matrix revealed that two copepod families Acartiidae and Pseudodiaptomidae maintain negative relationship with other six families indicating that they form a group by themselves. Results of multiple regression analysis reveal that salinity, chlorophyll-a and transparency are the potential hydrological factors in the distribution and existence of the dominant copepods and total chaetognaths. An overall high diversity index values (max. 3.21) was associated with high richness index (4.39) and high evenness index (0.96) at the site of the mouth of the estuary. In terms of feeding guild, the herbivore copepods were dominant followed by omnivores. Cluster analysis confirmed an overall dominance of the calanoid copepod Bestiolina similis as a solitary group for all the sites. The chaetognath Sagitta bedoti was perennial in distribution where the contribution of juvenile form (recognized as Stage I) was dominant. Among the other MZ, hydromedusae, ctenophore, sergestid and mysid were also encountered contributing insignificant part of the total density. A long-term decadal change in copepod community was pronounced which might be due to climate-induced environmental changes which also modulate the physicochemical characteristics of water.

Assessment of Total Mercury (HgT) in Sediments and Biota of Indian Sundarban Wetland and Adjacent Coastal Regions

The distribution of total mercury (HgT) in surface sediments (0-5 cm; n = 12; particle size < 63 µm) and representative biota (benthic polychaetes, bivalve mollusks and finfish) were observed in the Sundarban mangrove wetland and adjacent regions nearby the Indian Ganges river estuary. Relatively low concentrations of HgT were measured in sediments ranging from 0.008 µg g-1 to 0.056 µg g-1. There exist sharp differences in HgT accumulation in biota which revealed the following decreasing trend: polychaetes > fish > bivalve mollusks. These variations are related to a number of intrinsic (size, age and sex) and extrinsic (pH and salinity) factors together with the accumulation mechanisms intrinsic to each species for mercury. An organ-specific HgT accumulation in bivalve mollusks was evidenced with the following decreasing order: visceral mass > siphon > adductor muscle > mantle > gill, with a maximum value of 0.42 µg g-1 in Sanguinolaria acuminata. Fishes showed wide efficiency in HgT accumulation in dorsal muscle, and of most concern, one species presented HgT above 0.05 µg g-1 levels, the prescribed limit established by European Union. The benthic polychaetes showed extreme variations of HgT in their body tissues, with the maximum value of 0.603 µg g-1 in Dendronereis heteropoda which is above the European Union threshold value. The authors strongly recommend further monitoring to investigate the source of toxic metals, including Hg which may originate from diverse potential sources such as industrial discharges, agricultural runoff and sewage sludge from upstream of the Ganges River Estuary.

Perfluorinated compounds in surficial sediments of the Ganges River and adjacent Sundarban mangrove wetland, India

This study reports the first evidence of the quantification of two dominant perfluorinated compounds (PFCs), namely perfluorooctanesulfate (PFOS) and perfluorooctannoate (PFOA), in surface sediment samples (0–5cm; n=13) from the Ganges (Hugli) River including Sundarban wetland, India using HPLC–MS/MS. The concentrations of PFOA exhibited a wide range of concentrations from <0.5 to 14.09ng/gdry wt, whereas the concentration of PFOS was always below the detection limit of <0.5ng/g drywt. A consistent enrichment of PFOA was recorded in all the five sites of Sundarban (mean value 11.61±1.86) whereas it was of moderate concentration or below the detection level in the seven sites along with the lower stretch of the Ganges (Hugli) River estuary (mean value 5.96ng/gdry wt±5.36). Wastewater and untreated effluents are likely the major causes of accumulation of PFCs in sediments. The present paper could be used as baseline study to assess future monitoring programs of the ecosystem.

Distribution of polycyclic aromatic hydrocarbons in recent sediments of Sundarban mangrove wetland of India and Bangladesh: a comparative approach

The present work is the first attempt to compare the data of a comprehensive study of the origin and distribution of 16 priority pollutant polycyclic aromatic hydrocarbons (PAHs) in surface sediments (<63 μm) from 18 sampling stations, 9 from Sundarban of Bangladesh and 9 from Indian counterpart. Σ19PAHs concentration in sediments showed wide variations from 208.3 to 12,993.1 ng g−1 dry weight in Indian Sundarban, whereas 208.4 to 4,687.9 ng g−1 in the case of Bangladesh. Fluoranthene, pyrene, benzo(b)fluoranthene, benzo(a)pyrene and dibenzo(a,h)anthracene were predominant species for both the countries. The PAH diagnostic ratios indicated that the PAHs in sediments from both the countries were of mixed source of hydrocarbons of both petrogenic and pyrolytic origin. According to the numerical effect-based sediment quality guidelines, the levels of PAHs in the Sundarban wetland of Bangladesh and India should not exert adverse biological effects. The TEQ values calculated for samples from the Bangladesh and Indian Sundarban varied from 13.68 to 1,014.75 and 1.31 to 2,451 ng g−1 d.w. with an average of 221.02 and 358.63 ng g−1, respectively. The overall contamination status of PAH was higher in India than Bangladesh.

Geochemical fractionation of trace elements in sediments of Hugli River (Ganges) and Sundarban wetland (West Bengal, India)

A sequential extraction procedure was carried out to determinate the concentrations of 11 elements (Al, As, Cd, Co, Cr, Cu, Fe, Mn, Ni, Pb, Zn) in different geochemical phases of sediments collected along the Hugli (Ganges) River Estuary and in the Sundarban mangrove wetland, eastern coastal part of India. The chemical speciation of elements was determined using the three-step sequential extraction procedure described by the European Community Bureau of Reference. Total metal concentration was determined using a microwave-assisted acid digestion procedure. Metal concentrations were near the background level except for As for which a moderate pollution can be hypothesized. The mobility order of the metals was: Cd > Mn > Cu > Zn > As > Co > Pb > Ni > Fe > Cr > Al. The highest percentage of Cd (>60%) was found in the most labile phase. Residual fraction was prevailing for Fe, Cr and Al, while Pb was mainly associated with the reducible fraction. Data were compared with Sediment Quality Guidelines to estimate the relationship between element concentrations and adverse biological effects on benthic community, finding the possibility of some toxic effects due to the presence of As in the entire studied area and Cd, only in Calcutta.

Distribution and Ecosystem Risk Assessment of Polycyclic Aromatic Hydrocarbons (PAHs) in Core Sediments of Sundarban Mangrove Wetland, India

The origin and distribution of 19 priority pollutant polycyclic aromatic hydrocarbons (PAHs) in core sediments (<63 μm) from the Sundarban mangrove wetland, northeastern part of Bay of Bengal, India, were investigated by gas-chromatography/mass spectrometry (GC/MS). Sedimentary organic carbon and textural properties were also analyzed in order to assess the role of geochemistry on PAH distribution. ∑19PAHs concentration in sediments showed wide variations from 9.4–4222.8 ng/g dry weight, with an overall increase of the high molecular PAHs in the deeper depth profiles. Fluoranthene, chrysene, and pyrene were the most abundant hydrocarbons in sediments and it can be explained by active inputs of soil materials due to frequent strong rainfalls in this tropical climatic zone. A rather exceptional prevalence of high molecular weight PAHs was substantiated: nearly 80% of ∑19PAHs include fluoranthene (18–20%), chrysene (14–16%), and pyrene (10–11%). Carcinogenic compounds were present in moderately high (DBA, BkF, BbF) or negligible and low concentrations (BaP, InP) in a majority of cases. The PAH diagnostic ratios indicated that the PAHs in sediment cores were of pyrolytic origin, and that atmospheric deposition and land runoff may serve as the important pathways for PAHs input to the sediments. The total PAH levels were expressed as the benzo (a) pyrene toxicity equivalents (TEQcarc) making this compound a potential marker for PAH pollution. The baseline data can be used for regular ecological monitoring, considering the industrial and agricultural growth around this important estuarine environment. The results indicated that the PAHs in sediments of Sundarban wetland resulted in low to moderate ecosystem risk.

Ecological consideration of trace element contamination in sediment cores from Sundarban wetland, India

This article reports on the concentration of selected trace elements (Mn, Zn, Cr, Cu, Ba, As, B, V, and Hg) and major elements (Fe and Al) from the intertidal sediment cores from Sundarban wetland, India. This is a typical meso-macrotidal estuarine area affected by domestic and industrial activities located upstream. The overall concentrations range is low to moderate, indicating the environmental conditions in the outfall zone (grain size, hydrodynamic regime, and confinement), which favors the in situ accumulation of pollutants. The extent of contamination from trace elements in Sundarban core sediments is evaluated through a two-pronged approach: (i) by determining the metal enrichment in the sediments through the calculation of Pollution Load Index (PLI), Enrichment Factor (EF) and Index of Geoaccumulation (Igeo), and (ii) by defining a potential level of biological risk by the use of quality criteria such as Threshold Effect Level (TEL) and Effects Range-Low (ERL) benchmarks. On the basis of the calculated indices, sediments are particularly enriched with Cr, Cu, B, V, and As. Those enrichments seem to be due to the fine granulometry of the regions with Fe and Mn oxi-hydroxides being the main metal carriers. Trace Elements input to the Sundarban wetland need to be kept under strict control in future specially with reference to As since, according to TEL and ERL benchmarks, it already appears to be associated with a potential biological risk.

Heavy metals in biota from Sundarban Wetland Ecosystem, India: Implications to monitoring and environmental assessment

The coastal environment of West Bengal is recognized as the most diversified and productive ecosystem among all the maritime states of India. This area faces organic pollution from domestic sewage and toxic pollution from industrial effluents leading to serious impacts on water and sediment quality as well as on biodiversity. This article aims at providing information on concentration levels of heavy metals (iron, zinc, copper, manganese, cadmium, and mercury) in the tissues of a suspension feeder bivalve Macoma birmanica, whole body tissues of five gastropods (Cerithidea cingulata, C. obtusa, Telescopium telescopium, Thais lacera and Nerita articulata) and four finfishes (Liza tade, Harpodon nehereus, Trichiurus sp., and Boleopthalmus sp.) collected from water bodies of Sagar Island (22° 19′ N; 80° 03′ E), the largest delta of Sundarbans. A general trend with the following in decreasing order occurred: Fe&amp;gt;Zn&amp;gt;Mn&amp;gt;Cu&amp;gt;Cd&amp;gt;Hg. Both species-dependent variability and temporal variations were pronounced. A high degree of organ specificity was evident in M. birmanica where gill and mantle exhibited higher metal accumulation due to the ion exchange property of the mucous layer covering these organs. Gastropods and finfishes were differentially selective for a range of metals, reflecting the availability of the elements in the environment and the diet and digestive physiology of these organisms. An overall elevated concentration of these metals was observed during monsoon months when low pH and salinity prevailed in the ambient medium. A continuous monitoring program is recommended to establish the studied organisms as bioindicators and to identify future changes to conserve the “health” of this fragile ecosystem.