The giant freshwater prawn (GFP), Macrobrachium rosenbergii, is one of the largest palaemonids in the world, found in tropical marine, estuarine, and freshwaters, and is among the most commercially cultured crustaceans. According to research, mature males usually develop differences in cheliped morphology, growth characteristics, and agonistic behavior. The identification of such morphotypes is critical for effectively managing and handling prawns. The present study aimed to describe the GFP male population structure in culture ponds (the Yangtze River delta, China). Sixteen morphometric traits and four weight data were measured for each four male morphotype. Principal component and clustering analyses were conducted to investigate the morphological variation among the four morphotypes. The study of relative growth was also employed to estimate the growth patterns of body structures (dependent variables) in relation to the carapace length (independent variable). A detailed description of the cheliped’s macroscopic characteristics that differed among morphotypes was provided, which corroborated with previous studies of the species. The four morphotypes were statistically different regarding the cheliped morphology, size, and morphometric relationships and equations, indicating a considerable variation in growth among the four male morphotypes. The present results contribute to a clear understanding of the population biology of GFP and support future management and broodstock selection activities.