Structure Of Microbial Food Web Research Articles

Insights into the structure of the pelagic microbial food web in the oligotrophic tropical Western Pacific: Examining trophic interactions and relationship with abiotic variables

Microbial food webs (MFW) play an indispensable role in marine pelagic ecosystem, yet their composition and response to abiotic variables were poorly documented in the oligotrophic tropical Western Pacific. During winter of 2015, we conducted a survey to examine key components of MFW, including Synechococcus, Prochlorococcus, picoeukaryotes, heterotrophic prokaryotes (HP), heterotrophic/pigmented nanoflagellates and ciliates, across water column from surface to 2000 m. Each MFW component exhibited unique vertical distribution pattern, with abundance ratio varying over six and three orders of magnitude across Pico/Microplankton (1.6 ± 1.0 × 106) and Nano/Microplankton (3.2 ± 2.8 × 103), respectively. Furthermore, HP was main component for MFW in the bathypelagic (>1000 m) zone. Multivariate biota-environment analysis demonstrated that environmental variables, particularly temperature, significantly impacted MFW composition, suggesting that bottom-up control (resource availability) dominated the water column. Our study provides benchmark information for future environmental dynamics forcing on MFW in the oligotrophic tropical seas.

Drivers of microbial food-web structure along productivity gradients.

Ratios between viruses, heterotrophic prokaryotes and chlorophyll a are key indicators of microbial food structure and both virus-prokaryote and prokaryote-chlorophyll ratios have been proposed to decrease with system productivity. However, the mechanisms underlying these responses are still insufficiently resolved and their consistency across aquatic ecosystem types requires critical evaluation. We assessed microbial community ratios in highly productive African soda-lakes and used our data from naturally hypereutrophic systems which are largely underrepresented in literature, to complement earlier across-system meta-analyses. In contrast to marine and freshwater systems, prokaryote-chlorophyll ratios in African soda-lakes did not decrease along productivity gradients. High-resolution time series from two soda-lakes indicated that this lack of response could be driven by a weakened top-down control of heterotrophic prokaryotes. Our analysis of virus-prokaryote relationships, revealed a reduction of virus-prokaryote ratios by high suspended particle concentrations in soda-lakes. This effect, likely driven by the adsorption of free-living viruses, was also found in three out of four additionally analysed marine datasets. However, the decrease of virus-prokaryote ratios previously reported in highly productive marine systems, was neither detectable in soda-lakes nor freshwaters. Hence, our study demonstrates that system-specific analyses can reveal the diversity of mechanisms that structure microbial food-webs and shape their response to productivity increases.

Food web structure and energy flux dynamics, but not taxonomic richness, influence microbial ecosystem functions in a Sphagnum-dominated peatland

Soil microbial communities are vital for multiple ecosystem processes and services. In particular, soil microbial food webs are key determinants of soil biodiversity, functioning and stability. Unclear, however, is how structural features of food webs, such as species richness and turnover, biomass and energy transfer across trophic levels, influence the provisioning and stability of ecosystem functioning. Here, we explore the relationships between different facets of microbial food web structure (e.g. species richness, connectance, biomass and energy fluxes across trophic levels) and ecosystem functions (i.e. decomposition and microbial enzyme activity) across different habitats and depths in a peatland. We show that no aspect of taxonomic richness directly explained variation in ecosystem functions. Instead, we find that trophic interactions between basal species and primary consumers, and especially increasing connectance, biomass and energy flux transiting from decomposers and phototrophs to algivores, bacterivores and fungivores, enhance ecosystem functions in the peatland. These findings demonstrate that focusing on taxonomic diversity without explicit inclusion of food web structure and energy flows therein gives an incomplete and uninformative comprehension of relationships between biodiversity and ecosystem functioning, at least in peatlands. Our findings further suggest that the inclusion of soil microbial food webs in large-scale biogeochemical models is of fundamental importance to provide the necessary guidance for managing and mitigating the effects of environmental change.

Microbial food webs share similar biogeographic patterns and driving mechanisms with depths in oligotrophic tropical western Pacific Ocean.

Microbial food web (MFW) dominates the energy flow in oligotrophic tropical open ocean pelagic ecosystems. Understanding biogeographic patterns and driving mechanisms of key components of the MFW is one of the central topics in current marine ecology. Investigations were conducted along an 1,100-km horizontal gradient and in the full-water column vertical gradient of the oligotrophic tropical western Pacific Ocean. High-throughput sequencing and association networking methods were used to analyze the community structure and interspecies interactions of MFW. The structure of MFW significantly differed with depths, but not across horizontal gradients. Bacteria and microeukaryotes were interconnected and had more predominantly positive and negative linkages in the aphotic layers. Key components of MFW exhibited similar biogeographic patterns and driving mechanisms. Geographic distance exerted minimal effects on the distribution patterns of the microbial food web, while environmental factors played more important roles, especially for temperature and inorganic nutrients. Stochastic processes were more important in the microbial food webs of the 5-200 m layer than the >500 m layer, and drift explained the majority of stochastic processes. Moreover, only a weak but not significant driving force for North Equatorial Current on the east-west connectivity of the microbial food web was found in the upper layers. This knowledge is a critical fundamental data for future planning of marine protected areas targeting the protection of tuna fishing in the western Pacific Ocean.

Effects of Fires on Microbial and Metazoan Communities in Peatlands

The increase in the frequency of peatland fires is due to both global climate change and deliberate human activity. The primary aim of the study was to investigate the structure of microbial communities and nematodes before and after a peat bog fire, as well as to analyse the relationships between food web components. Hydrological and physicochemical parameters were analysed during the period before the fire (2018 and 2019) and after the fire (2020 and 2021—2, 4, 8, and 12 months after the fire). The fire clearly modified the physicochemical properties of the peat bog, increasing the temperature, pH, conductivity, and concentrations of biogenic compounds and organic matter. It also caused a pronounced deterioration in oxygen conditions. The fire clearly modified the qualitative and quantitative structure and functioning of microbial food webs. This was reflected in a decrease in the species number and abundance of testate amoebae, with various groups of microbes showing pronounced fluctuations during the study period. The functioning of food webs in peatlands after fires is still very little understood, although an understanding of the functioning of these habitats, which increasingly undergo this type of catastrophe due to global climate change, is crucial.

Using hierarchical stable isotope to reveal microbial food web structure and trophic transfer efficiency differences during lake melt season

The microbial food web (MFW) is a material and energy source in lake water ecosystems. Although it is crucial to determine its structure and function for water ecological health, MFW changes during lake melt period have not been well studied. In this study, the MFW was divided into three categories by analyzing its structure and trophic transfer efficiency using hierarchical C/N stable isotopes and eDNA sequencing techniques, including the detrital food web (DFC, 15 %), classical grazing food web (CFC, 60 %), and mixed trophic food web (MFC, 25 %). The trophic structure and type of MFW in ice-melting lakes are always in the process of succession and adaptation, which is in a relatively low trophic transfer efficiency stage under stable conditions (i.e. CFC), whereas the input of exogenous debris and organic pollutants may lead to an increase in MFW trophic transfer efficiency (i.e. MFC, DFC). The trophic transfer efficiency from the previous trophic level to protozoa and micrometazoa was 16.32 % and 20.77 % in DFC and 10.20 % and 29.43 % in MFC, respectively. Both are obviously higher than those of the CFC (11.69 % and 9.45 %, respectively). In terms of trophic structure, the community interaction and trophic cascade effect of DFC and MFC were enhanced but easily changed with environmental factors. In contrast, the core species and cascading effects of the CFC were clearer, and the MFW structure was relatively stable. Overall, this study reveals that the explosive increase in MFW trophic transfer efficiency induced by exogenous input during the lake melt period may subsequently lead to the destabilization of the microbial community structure and cause potential ecological risks. These are manifested in the absence of ecological trophic processes, the decrease in trophic structure complexity and stability, and the weakening of microecology self-adaptive regulation ability.

Quasi‐Antiphase Diel Patterns of Abundance and Cell Size/Biomass of Picophytoplankton in the Oligotrophic Ocean

AbstractPicophytoplankton are the smallest, most abundant photosynthetic organisms in the ocean. Knowledge of the diel variability of these tiny microbes has important implications for the structure of microbial food webs and key biogeochemical processes. However, insight into the mechanisms that underlie picophytoplanktonic diel dynamics is limited. By combining a field survey with a published dataset, we found that cell numbers and cell sizes/biomasses of picophytoplankton were tightly synchronized to the day‐night cycle, but they were in a quasi‐antiphase relationship to each other. This pattern is a confirmation and extension of previous studies. Mortality rates showed that Prochlorococcus and Synechococcus were subject to considerable grazing pressure throughout the day and night. The quasi‐antiphase diel cycles in abundance and cell size/biomass are likely determined by the light‐dependent diel behavior of cell growth and division and continuous losses to grazing. This work significantly improves our understanding of autotrophic picoplankton in the oligotrophic ocean.

Changing Ecological Conditions in the Marine Environment Generate Different Microbial Food Web Structures in a Repeatable Manner

The mechanisms responsible for the development of various structural and functional features of the microbial food web (MFW) and their dynamics at spatial and temporal scales, which are important for predicting their responses to future environmental changes, are largely unknown. More than 3000 datasets of environmental and microbial variables collected over a decade on a seasonal and large spatial scale in the Adriatic Sea were analyzed. The sets of environmental variables were classified into four clusters (representing different environmental states) using Neural Gas analysis and the differences in MFW structure between the clusters were analyzed. Different variants of MFW evolve in the different clusters in terms of the abundance of MFW components, their ratios, growth and grazing rates, predator preference in prey selection, the strength of predator-prey interaction, and the relative importance of top-down and bottom-up control. However, these clusters are neither spatially nor temporally fixed; rather, the area studied represents a mosaic of different environmental conditions that alternate from one state to another on a time scale. In each of the environmental states, a distinct structure of MFW develops that shows consistent and repeatable changes that strictly follow the switching in environmental conditions from one state to another.

Using Hierarchical Stable Isotope to Reveal Microbial Food Web Structure and Trophic Transfer Efficiency Differences During Lake Melt Season

Using Hierarchical Stable Isotope to Reveal Microbial Food Web Structure and Trophic Transfer Efficiency Differences During Lake Melt Season

Removal of large viruses and their dispersal through fecal pellets of the appendicularianOikopleura dioicaduringEmiliania huxleyibloom conditions

AbstractDespite their importance in shaping the structure and function of marine microbial food webs, little is known about factors regulating marine virus abundance. Previous work demonstrated clearance of laboratory‐culturedEmiliania huxleyivirus by the appendicularianOikopleura dioica; however, the applicability of this interaction to natural virus assemblages was not investigated. Here, we conducted controlled laboratory experiments usingO. dioicaand mesocosm water containing natural virus assemblages with high densities of virus, and measured removal of virus byO. dioicausing both flow cytometry and molecular methods. Bayesian models based on flow cytometry quantification of virus particles demonstrated efficient removal of viruses (mean 90.3 mL ind−1d−1), with a clearance efficiency of 42.6% relative to food algae. Molecular detection of virus removal by quantification of viralmcpgene copies revealed a mean clearance rate of 68.1 mL ind−1d−1. Fecal pellets from these experiments demonstrated that viruses in fecal pellets retain infectivity despite passage through theO. dioicagut. Shotgun metavirome analysis demonstratedO. dioicaremoval of large virus groups, notably the Phycodnaviridae. The results demonstrate the removal ofE. huxleyivirus from natural virus assemblages byO. dioicaand the maintenance of viral infectivity when incorporated into fecal pellets, prompting further investigation on the fate of fecal‐packaged viruses and their impact on host dynamics. Furthermore, our results indicate the generality of this interaction for other large algal viruses, raising questions about the implications of this mechanism of marine virus redistribution on the broader marine virus community.

Predicting the structure and functions of peatland microbial communities from Sphagnum phylogeny, anatomical and morphological traits and metabolites

Abstract Sphagnum mosses are keystone species in northern peatlands. Notably, they play an important role in peatland carbon (C) cycling by regulating the composition and activity of microbial communities. However, it remains unclear whether information on Sphagnum phylogeny and/or traits‐based composition (i.e. anatomical and morphological traits and metabolites) can be used to predict the structure of microbial communities and their functioning. Here we evaluated whether Sphagnum phylogeny and traits predict additional variation in peatland microbial community composition and functioning beyond what would be predicted from environmental characteristics (i.e. climatic and edaphic conditions). We collected Sphagnum and microbial data from five European peatlands distributed along a latitudinal gradient from northern Sweden to southern France. These data allowed us to assess Sphagnum anatomical and morphological traits and metabolites at different sites along changing environmental conditions. Using structural equation modelling (SEM) and phylogenetic distance analyses, we investigated the role of Sphagnum traits in shaping microbial community composition and functioning along with environmental conditions. We show that microbial community composition and traits varied independently from both Sphagnum phylogeny and the latitudinal gradient. Specifically, the addition of Sphagnum traits to climatic and edaphic variables to the SEM allowed it to explain a larger proportion of the explained variance (R2). This observation was most apparent for the biomass of decomposers (+42%) and phototrophs (+19%), as well as for growth yield microbial traits (+10%). As such, that Sphagnum metabolites were important drivers for microbial community structure and traits, while Sphagnum anatomical and morphological traits were poor predictors. Synthesis. Our results highlight that Sphagnum metabolites are more likely to influence peatland microbial food web structure and functioning than Sphagnum anatomical and morphological traits. We provide further evidence that measurements of the plant metabolome, when combined with classical functional traits, improve our understanding of how the plants interact with their associated microbiomes.

Geographical and Seasonal Thermal Sensitivity of Grazing Pressure by Microzooplankton in Contrasting Marine Ecosystems

Grazing pressure, estimated as the ratio between microzooplankton grazing and phytoplankton growth rates (g:μ), is a strong determinant of microbial food-web structure and element cycling in the upper ocean. It is generally accepted that g is more sensitive to temperature than μ, but it remains unknown how the thermal dependence (activation energy, Ea) of g:μ varies over spatial and temporal scales. To tackle this uncertainty, we used an extensive literature analysis obtaining 751 paired rate estimates of μ and g from dilution experiments performed throughout the world’s marine environments. On a geographical scale, we found a stimulatory effect of temperature in polar open-ocean (∼0.5 eV) and tropical coastal (∼0.2 eV) regions, and an inhibitory one in the remaining biomes (values between −0.1 and −0.4 eV). On a seasonal scale, the temperature effect on g:μ ratios was stimulatory, particularly in polar environments; however, the large variability existing between estimates resulted in non-significant differences among biomes. We observed that increases in nitrate availability stimulated the temperature dependence of grazing pressure (i.e., led to more positive Ea of g:μ) in open-ocean ecosystems and inhibited it in coastal ones, particularly in polar environments. The percentage of primary production grazed by microzooplankton (∼56%) was similar in all regions. Our results suggest that warming of surface ocean waters could exert a highly variable impact, in terms of both magnitude and direction (stimulation or inhibition), on microzooplankton grazing pressure in different ocean regions.

Temperature fluctuations in a warmer environment: impacts on microbial plankton.

Warming can cause changes in the structure and functioning of microbial food webs. Experimental studies quantifying such impacts on microbial plankton have tended to consider constant temperature conditions. However, Jensen’s inequality (or the fallacy of the average) recognizes that organism performance under constant conditions is seldom equal to the mean performance under variable conditions, highlighting the need to consider in situ fluctuations over a range of time scales. Here we review some of the available evidence on how warming effects on the abundance, diversity, and metabolism of microbial plankton are altered when temperature fluctuations are considered. We found that fluctuating temperatures may accentuate warming-mediated reductions in phytoplankton evenness and gross photosynthesis while synergistically increasing phytoplankton growth. Also, fluctuating temperatures have been shown to reduce the positive warming effect on cyanobacterial biomass production and recruitment and to reverse a warming effect on cellular nutrient quotas. Other reports have shown that fluctuations in temperature did not alter plankton responses to constant warming. These investigations have mostly focused on a few phytoplankton species (i.e. diatoms and haptophytes) in temperate and marine ecosystems and considered short-term and transient responses. It remains unknown whether the same responses apply to other species and ecosystems and if evolutionary change in thermally varying environments could alter the magnitude and direction of the responses to warming observed over short-term scales. Thus, future research efforts should address the role of fluctuations in environmental drivers. We stress the need to study responses over different biological organization and trophic levels, nutritional modes, temporal scales, and ecosystem types.

Seasonal and Spatial Variation of Pelagic Microbial Food Web Structure in a Semi-Enclosed Temperate Bay

Microbial food web (MFW) in the seawater encompasses the smallest organisms: viruses, autotrophic prokaryotes and heterotrophic prokaryotes (HP), nanoflagellates, eukaryotic phytoplankton and ciliates. For many years, scientists investigated the MFW structure differences in distinct water masses. However, the MFW structure seasonal variation in coastal areas remains poorly documented. In this study, we report on the seasonal and spatial variations of the MFW structure in the temperate Sanggou Bay in four successive seasons, from spring to winter. With a temperature increase from 1.90 to 24.20C, HP biomass increased from 3.77 to 135.77 μg C dm-3, almost covering the whole variation range for the global ocean. The autotrophic (AUTO) components, including Synechococcus (SYN), phototrophic picoeukaryotes (PEUK) and pigmented nanoflagellates (PNF), exhibited biomass variation ranges as large as previously reported. The MFW structure seasonal variation was driven by MFW relative biomasses (biomass ratios of MFW components to HP). With the increase of HP biomass, PNF and PEUK relative biomasses increased more rapidly than those of other groups while that of ciliates slightly decreased. The HETE:AUTO (biomass ratio of heterotroph to autotroph organisms) decreased with temperature, it was 1 in other seasons. Cluster analyses distinguished Inside Bay and Outside Bay on the basis of hydrological characteristics. Consistently, the two subdivisions of Sanggou Bay exhibited different MFW structures as well as distinct tintinnid communities. The main MFW structure difference between Inside and Outside Bay was the biomass ratios of AUTO components to HP. Our results showed that the variations of autotrophic component biomass ratios relative to HP were the main factor responsible for the MFW structure seasonal variation. The spatial difference in MFW structure as well as in tintinnid taxonomic composition between Inside and Outside Bay was linked to the semienclosed nature of the Bay that does not favour efficient mixing with outside Yellow Sea waters.

Marine Microbial Food Web Networks During Phytoplankton Bloom and Non-bloom Periods: Warming Favors Smaller Organism Interactions and Intensifies Trophic Cascade.

Microbial food web organisms are at the base of the functioning of pelagic ecosystems and support the whole marine food web. They are very reactive to environmental changes and their interactions are modified in response to different productive periods such as phytoplankton bloom and non-bloom as well as contrasted climatic years. To study ecological associations, identify potential interactions between microorganisms and study the structure of the microbial food web in coastal waters, a weekly monitoring was carried out in the Thau Lagoon on the French Mediterranean coast. The monitoring lasted from winter to late spring during two contrasting climatic years, a typical Mediterranean (2015) and a year with an extreme warm winter (2016). Correlation networks comprising 110 groups/taxa/species were constructed to characterize potential possible interactions between the microorganisms during bloom and non-bloom periods. Complex correlation networks during the bloom and dominated by negative intraguild correlations and positive correlations of phytoplankton with bacteria. Such pattern can be interpreted as a dominance of competition and mutualism. In contrast, correlation networks during the non-bloom period were less complex and mostly dominated by tintinnids associations with bacteria mostly referring to potential feeding on bacteria, which suggests a shift of biomass transfer from phytoplankton-dominated food webs during bloom to more bacterioplankton-based food webs during non-bloom. Inter-annual climatic conditions significantly modified the structure of microbial food webs. The warmer year favored relationships among smaller group/taxa/species at the expense of large phytoplankton and ciliates, possibly due to an intensification of the trophic cascade with a potential shift in energy circulation through microbial food web. Our study compares a typical Mediterranean spring with another mimicking the prospected intensification of global warming; if such consideration holds true, the dominance of future coastal marine ecosystems will be shifted from the highly productive herbivorous food web to the less productive microbial food web.

Susceptibility and resilience of the soil ciliate community to high temperatures

ABSTRACT Ciliates play important ecological roles as microbial predators in soil. Although arable soils can experience a wide range of temperatures caused by agricultural land management, the effect of temperature on soil ciliates has been poorly documented, particularly for high temperatures over 30°C. Here, we studied the response of the soil ciliate community to different temperatures in comparison with that of the bacterial and fungal communities. Soils collected from a greenhouse were supplemented with organic fertilizer and incubated at different temperatures (10–60°C). Ciliate trophozoites were detected in the pore water of the soils incubated at 20°C and 10°C, while no trophozoites were observed at temperatures of 30°C and higher. The diversity of the ciliate community represented by fingerprints of denaturing gradient gel electrophoresis (DGGE) also decreased at temperatures higher than 20°C. A few DGGE bands were exclusively dominated at 40°C. The ciliate community composition in the soil incubated at 40°C recovered after subsequent incubation at 20°C, suggesting the resilience of the ciliate community to heat stress. Such recovery was not observed in the soil incubated at 60°C, probably because of the lethal effect on most soil ciliates. The responses of the ciliate community to temperature were similar to those of the fungal community, while the bacterial community showed higher resistance and resilience than the ciliate and fungal communities. The results suggested that temperature is an important factor controlling the ciliate community and affects the structure and functions of the soil microbial food web.

Recent Changes in Peatland Testate Amoeba Functional Traits and Hydrology Within a Replicated Site Network in Northwestern Québec, Canada

Northern peatlands, which are highly heterogeneous ecosystems, are a globally important carbon (C) store. Understanding the drivers and predicting the future trajectory of the peatland C store requires upscaling from cores and sites to regions and continents, alongside a detailed understanding of the mechanisms governing their C sequestration. Studies incorporating replication are therefore important to quantify how peatland heterogeneity may affect upscaling from local-scale dynamics to models. In addition, we need to better understand the processes driving observed variability, but the interplay between plants, microbes and C cycling in peatlands remains poorly understood. One approach to address both issues is to examine replicated microbiological functional traits within a multi-proxy framework to provide an ecosystem-level perspective on ecological and biogeochemical processes. Peatland testate amoebae are a functionally important group of protists that are well suited to such an approach. Analysing testate amoeba functional traits provides an opportunity to examine processes that may affect key peatland ecosystem services, such as C sequestration. Here, we compared four key testate amoeba functional traits (mixotrophy, biovolume, aperture size and aperture position) to C accumulation, hydrological and vegetation changes in 12 post-Little Ice Age peat records. Samples were collected from high-boreal and low-subarctic regions in northwestern Quebec, Canada in an experimental design that includes internal and external replication at both site and regional scales. Our results showed that correspondence between C accumulation, hydrology and testate amoeba functional traits varied, but recent changes in mixotrophy and aperture size, which may affect peatland C sequestration potential and microbial food web structure respectively, showed tentative links to recent C accumulation increases. Vegetation, especially Sphagnum abundance was important in promoting mixotrophy and small aperture size in testate amoeba communities. Future impacts of climate change on peatland vegetation will further influence the functional role of testate amoebae on C sequestration through changing mixotrophic testate amoeba abundance.

The Influence of Dissolved Organic Carbon on the Microbial Community Associated with Tetraselmis striata for Bio-Diesel Production

The green alga Tetraselmis striata is regarded as a suitable candidate microalga for bio-diesel production. Recently, T. striata was cultured near Yeonghueung Island, Korea, in a “marine culturing field”; however, its environmental impacts are not yet studied. We estimated the amount of dissolved organic carbon (DOC) released from T. striata cultivation in the marine culturing field, and we investigated the changes in bacterial composition. Then, we designed and installed a mesocosm for further understanding. From the mesocosm results, the DOC released from the cultivation of T. striata led to changes in bacterial communities, disturbance of the microbial food web structure, rapid depletion of nutrients, and a decrease in dissolved oxygen (DO) and pH. Our novel work demonstrates that large amounts of DOC secreted by large-scale microalgal cultures such as that of T. striata can potentially have a significant impact on the structure and function of the surrounding microbial ecosystem.

Spatio-temporal reproducibility of the microbial food web structure associated with the change in temperature: Long-term observations in the Adriatic Sea

Global and atmospheric climate change is altering the thermal conditions in the Adriatic Sea and, consequently, the marine ecosystem. Along the eastern Adriatic coast sea surface temperature (SST) increased by an average of 1.03 °C during the period from 1979 to 2015, while in the recent period, starting from 2008, a strong upward almost linear trend of 0.013 °C/month was noted. Being mainly oligotrophic, the middle Adriatic Sea is characterized by the important role played by the microbial food web in the production and transfer of biomass and energy towards higher trophic levels. It is very important to understand the effect of warming on microbial communities, since small temperature increases in surface seawater can greatly modify the microbial role in the global carbon cycle. In this study, the Self-Organizing Map (SOM) procedure was used to analyse the time series of a number of microbial parameters at two stations with different trophic status in the central Adriatic Sea. The results show that responses of the microbial food web (MFW) structure to temperature changes are reproducible in time. Furthermore, qualitatively similar changes in the structure of the MFW occurred regardless of the trophic status. The rise in temperature was associated with: (1) the increasing importance of microbial heterotrophic activities (increase bacterial growth and bacterial predator abundance, particularly heterotrophic nanoflagellates) and (2) the increasing importance of autotrophic picoplankton (APP) in the MFW.

Marine archaea and archaeal viruses under global change.

Global change is altering oceanic temperature, salinity, pH, and oxygen concentration, directly and indirectly influencing marine microbial food web structure and function. As microbes represent >90% of the ocean’s biomass and are major drivers of biogeochemical cycles, understanding their responses to such changes is fundamental for predicting the consequences of global change on ecosystem functioning. Recent findings indicate that marine archaea and archaeal viruses are active and relevant components of marine microbial assemblages, far more abundant and diverse than was previously thought. Further research is urgently needed to better understand the impacts of global change on virus–archaea dynamics and how archaea and their viruses can interactively influence the ocean’s feedbacks on global change.