A long-term vertical ozone observational dataset has been provided during 2001–2019 by ozonesonde measurements in Beijing on the North China Plain. Previous studies using this dataset primarily focused on the vertical characteristics of climatological ozone and its variation; however, the driving factors of ozone variation have not been well discussed. In this study, by applying the wavelet analysis method (including continuous wavelet transform and cross wavelet) and sliding correlation coefficients to ~20 years of ozonesonde measurements collected in Beijing, we analyzed the dominant modes of ozone column variability within three height ranges over Beijing (total column ozone: TOT; stratospheric column ozone: SCO; and tropospheric column ozone: TCO). Moreover, we also preliminarily discussed the relationship between these three ozone columns and the El Niño Southern Oscillation (ENSO), Quasi-biennial Oscillation (QBO), and 11-year solar activity cycle. The results revealed that the ozone columns within the three height ranges predominantly adhered to interannual variability patterns, and the short-term variabilities in TOT and SCO may have been related to eruptive volcanic activity. In comparison to the TOT and SCO, the TCO was more susceptible to the forcing influences of high-frequency factors such as pollutant transport. Similar to the results in other mid-latitude regions, strong ENSO and QBO signals were revealed in the interannual ozone column variability over Beijing. The TOT and SCO showed positive anomalous responses to ENSO warm-phase events, and the peak of the ENSO warm phase led the winter peaks of the TOT and SCO by approximately 3–6 months. During the strong cold–warm transition phase in 2009–2012, the TOT and SCO showed a significant positive correlation with the ENSO index. The strong seasonality of the meridional circulation process driven by the QBO led to a significant positive correlation between the QBO index and the TOT and SCO in the interannual cycle, except for two periods of abnormal QBO fluctuations in 2010–2012 and 2015–2017, whereas the TCO showed a time-lagged correlation of approximately 3 months in the annual cycle relative to the QBO due to the influence of the thermodynamic tropopause. In addition, analysis of the F10.7 index and the ozone columns revealed that the ozone columns over Beijing exhibited lagged responses to the peaks of sunspot activity, and there was no obvious correlation between ozone columns and 11-year solar activity cycle. Given the complex driving mechanism of the climatic factors on local ozone variability, the preliminary results obtained in this study still require further validation using longer time series of observational data and the combination of chemical models and more auxiliary data.