Coral Species Research Articles

Coral performance is comparable when transplanted to disparate reef sites despite divergent histories of reef decline and recovery

As coral reefs degrade worldwide, researchers and managers need to determine whether corals can acclimatize to altered local conditions or whether their fixed phenotypes prevent coral persistence under these new environmental conditions. Fixed phenotypes could produce environmental mismatches that reduce population connectivity and exacerbate decline in the near-term, but a capacity for acclimatization could be harnessed in both passive and proactive coral restoration efforts. Here, we conducted a reciprocal transplant experiment in Mo‘orea, French Polynesia, to test how intraspecific performance of 2 common coral species (Acropora hyacinthus and Pocillopora verrucosa) varied between a neighboring forereef and backreef that differed dramatically in trajectories of coral loss, resilience over decadal time scales, and cover of corals versus competing macroalgae. We also tested how corals responded to 2 common stressors—corallivory and macroalgal competition—and how this varied as a function of transplant location and the area of origin. Growth and survival of both coral species were affected by macroalgal competition, corallivory, transplant location, or some combination thereof, but we found limited evidence that the habitat of origin significantly impacted intraspecific performance. These results suggest that acclimatization capacity may outweigh local adaptation for these common reef-building species and could be leveraged to facilitate coral restoration.

Insights into the occurrence of phylosymbiosis and co-phylogeny in the holobionts of octocorals from the Mediterranean Sea and Red Sea

BackgroundCorals are the foundational species of coral reefs and coralligenous ecosystems. Their success has been linked to symbioses with microorganisms, and a coral host and its symbionts are therefore considered a single entity, called the holobiont. This suggests that there may be evolutionary links between corals and their microbiomes. While there is evidence of phylosymbiosis in scleractinian hexacorals, little is known about the holobionts of Alcyonacean octocorals.Results16S rRNA gene amplicon sequencing revealed differences in the diversity and composition of bacterial communities associated with octocorals collected from the mesophotic zones of the Mediterranean and Red Seas. The low diversity and consistent dominance of Endozoicomonadaceae and/or Spirochaetaceae in the bacterial communities of Mediterranean octocorals suggest that these corals may have a shared evolutionary history with their microbiota. Phylosymbiotic signals were indeed detected and cophylogeny in associations between several bacterial strains, particularly those belonging to Endozoicomonadaceae or Spirochaetaceae, and coral species were identified. Conversely, phylosymbiotic patterns were not evident in Red Sea octocorals, likely due to the high bacterial taxonomic diversity in their microbiota, but cophylogeny in associations between certain coral and bacterial species was observed. Noteworthy were the associations with Endozoicomonadaceae, suggesting a plausible evolutionary link that warrants further investigations to uncover potential underlying patterns.ConclusionsOverall, our findings emphasize the importance of Endozoicomonadaceae and Spirochaetaceae in coral symbiosis and the significance of exploring host-microbiome interactions in mesophotic ecosystems for a comprehensive understanding of coral-microbiome evolutionary history.

Contrasting Patterns of Population Genomic Structure Between Broadcast‐Spawning and Brooding Corals in Southeast Asia

ABSTRACTAimAs climate change increasingly threatens the world's coral reefs, enhancing their resilience by improving population connectivity for key reef species is crucial for ensuring their persistence. Here, we evaluate the population genomic structure of two common coral species, Pocillopora acuta and Porites sp., chosen due to their divergent life histories. Thousands of single‐nucleotide polymorphisms (SNPs) were sequenced and analysed to infer regional connectivity patterns in Southeast Asia, a region that harbours a tremendous diversity of marine life.LocationCoasts of the Malay Peninsula and northern Borneo, covering ~1 million km2.MethodNextRAD genotyping‐by‐sequencing of 185 Porites sp. and 221 Pocillopora acuta colonies. Libraries were prepared and sequenced on Illumina NovaSeq 6000. Genotyping involved initial quality controls, allele frequency filtering and checks for contamination. Genetic structure was assessed with Bayesian clustering, and relationships between genetic variation and environmental factors were studied through redundancy analysis. Contemporary gene flow was estimated using BayesAss.ResultsWe observed panmixia among the broadcasting Porites sp. populations, while for the brooding Pocillopora acuta, the Malay Peninsula acts a strong barrier to dispersal between the Malacca Strait and the southern South China Sea. Moreover, its genomic structure seems to follow current marine ecoregion delineation. By analysing contemporary migrant movement, we can prioritise reef localities for conservation. In particular, localities at the Andaman Coral Coast are contemporarily isolated from the other localities, and Tioman is identified as a major larval source for both species.Main ConclusionOur analyses highlight contrasting population differentiation patterns between the two species that can be explained by the disparity in their reproductive strategies. These findings are important for biodiversity managers in Southeast Asia; incorporation of regional connectivity considerations into conservation planning can help safeguard ecosystem resilience and persistence.

Desert dust improves the photophysiology of heat-stressed corals beyond iron

Desert dust is an important source of essential metals for marine primary productivity, especially in oligotrophic systems surrounded by deserts, such as the Red Sea. However, there are very few studies on the effects of dust on reef-building corals and none on the response of corals to heat stress. We therefore supplied dust to two coral species (Stylophora pistillata and Turbinaria reniformis) kept under control conditions (26 °C) or heat stress (32 °C). Since dust releases large amounts of iron (Fe) in seawater, among other metals, the direct effect of different forms of Fe enrichment on coral photosynthesis was also tested. First, our results show that the desert dust altered the coral metallome by increasing the content of metals that are important for coral physiology (e.g. lithium (up to 5-fold), manganese (up to 4-fold in S. pistillata), iron (up to 3-fold in S. pistillata), magnesium (up to 1.3-fold), molybdenum (up to 1.5-fold in S. pistillata)). Overall, metal enrichment improved the photosynthetic performance of corals, especially under thermal stress (e.g. Pgross (up to 2-fold), Pnet (up to 10-fold), chlorophyll (up to 1.5-fold), symbionts (up to 1.6-fold)). However, Fe exposure (ferric chloride or ferric citrate) did not directly improve photosynthesis, suggesting that it is the combination of metals released by the dust, the so-called “metal cocktail effect”, that has a positive impact on coral photophysiology. Dust also led to a decrease in Ni uptake (up to 1.4-fold in the symbionts), likely related to the nitrogen metabolism. Finally, we found that the isotopic signature of metals such as iron, zinc and copper is a good indicator of heat stress and dust exposure in corals. In conclusion, desert dust can increase coral resistance to bleaching by supplying corals with essential metals.

Acclimation and size influence predation, growth, and survival of sexually produced Diploria labyrinthiformis used in restoration

Stony coral tissue loss disease (SCTLD) has swept through Florida reefs and caused mass mortality of numerous coral species. In the wake of these losses, efforts are underway to propagate coral species impacted by SCTLD and promote population recovery. However, numerous knowledge gaps must be addressed to effectively grow, outplant, and restore populations of the slower growing, massive species that were lost. Here, we used sexual recruits of Diploria labyrinthiformis spawned in captivity to understand how conditioning, coral size, and nutritional status at outplanting affect coral survivorship, growth, and susceptibility to predation. We found that ex situ conditioning with supplemental feeding increased coral growth rates, resulting in larger sized corals at the time of outplanting. In turn, these corals had higher growth rates in the field and a lower probability of being removed by predators than outplants that were conditioned in in situ nurseries. Additionally, we found that coral size was an important predictor of survivorship, suggesting that hastening the speed at which young corals grow and outplanting larger juveniles can improve restoration outcomes. Taken together, our results suggest that providing supplemental food to corals at ex situ facilities confers benefits that could help restore populations of massive coral species impacted by SCTLD.

Assessment of coral diseases in the shallow reefs of Aka-jima Marine Reserve (AMR), with a brief geographic perspective of disease occurrence throughout the larger Kerama-Shoto Marine National Park (KMNP), Okinawa, Japan

This study reports on the observation of coral diseases within the shallow/intertidal water habitat of the Akajima Marine Reserve (AMR), located within the Keramashoto Marine National Park (KMNP) of Japan. Major coral genera and species assessed during the survey included Montipora spp., Porites spp., Isopora palifera, Acropora spp., as well as other. Observed diseases and health conditions included Black Band Disease (BBD) in Montipora as well as in Goniopora, Skeletal Growth Anomalies (GAs) in Acropora, Montipora, Porites, Isopora and Astreopora, Terpios hoshinota covering Acropora, Montipora and Seriatopora, as well as bleaching, discoloration, and other compromised health signs. This field study recorded the presence of GAs in the genus Leptastrea for the first time within the Japanese Archipelago. The novelty in this study is reporting unreported genera to be infested with certain disease conditions, further this study demonstrates how surveys in previously poorly studied areas or habitats can reveal important information pertaining to coral diseases, thus helping to fill existing knowledge gaps. Another important aspect of this study is, we provide a review of the distribution of coral diseases within the KMNP based on our results and previous reports. Being a rapid survey, the dynamics of these diseases were not assessed, while the major cause(s) of the diseases remains to be identified. In general, climate change-related aspects including rises in sea surface temperatures, as well as other factors such as host density may be responsible for disease prevalences in the region.

Ecophenotypic variation in a cosmopolitan reef-building coral suggests reduced deep-sea reef growth under ocean change

Sensitivity of reef-building corals to environmental factors has far-reaching ecosystem implications, especially in the limited number of cold-water coral (CWC) species that form reefs in the deep sea. Understanding CWC responses to large-scale oceanographic variation in their natural habitat can elucidate their sensitivity to global anthropogenic stressors. Here, we use skeletal samples to analyse fine-scale phenotypic variation in the widespread reef-building CWC Desmophyllum pertusum (Lophelia pertusa) in relation to broad physicochemical gradients in different sites across the Atlantic Ocean and Mediterranean Sea. We find evidence, amidst local and regional differentiation, of species-wide growth responses to physicochemical factors, mainly affecting corallite length, width and their ratio (slenderness). Our results suggest that higher temperature and lower oxygen levels negatively affect skeletal linear extension and budding rate of polyps. As also hinted by the reduced corallite length and slenderness in less developed reefs, these widespread responses may lead to a general decline in CWC reef growth rates as a long-term consequence of ocean warming and deoxygenation. Given this relevance, such responses can be used to model reef growth in a changing ocean.

Population structure of Desmophyllum pertusum found along the United States eastern continental margin

ObjectiveThe connectivity and genetic structuring of populations throughout a region influence a species’ resilience and probability of recovery from anthropogenic impacts. By gaining a comprehensive understanding of population connectivity, more effective management can be prioritized. To assess the connectivity and population genetic structure of a common cold-water coral species, Desmophyllum pertusum (Lophelia pertusa), we performed Restriction-site Associated DNA Sequencing (RADseq) on individuals from nine sites ranging from submarine canyons off New England to the southeastern coast of the United States (SEUS) and the Gulf of Mexico (GOM). Fifty-seven individuals and 3,180 single-nucleotide polymorphisms (SNPs) were used to assess genetic differentiation.ResultsHigh connectivity exists among populations along the SEUS, yet these populations were differentiated from those to the north off New England and in Norfolk Canyon along the North Atlantic coast of the United States, as well as those in the GOM. Interestingly, Norfolk Canyon, located just north of North Carolina, and GOM populations exhibited low levels of genetic differentiation, corroborating previous microsatellite analyses and signifying gene flow between these populations. Increasing sample sizes from existing populations and including additional sampling sites over a larger geographic range would help define potential source populations and reveal fine-scale connectivity patterns among D. pertusum populations.

Ex situ spawning, larval development, and settlement in massive reef‐building corals (Porites) in Palau

AbstractReproduction, embryological development, and settlement of corals are critical for survival of coral reefs through larval propagation. Yet, for many species of corals, a basic understanding of the early life‐history stages is lacking. In this study, we report our observations for ex situ reproduction in the massive reef‐building coral Porites cf. P. lobata across 2 years. Spawning occurred in April and May, on the first day after the full moon with at least 2 h of darkness between sunset and moonrise, on a rising tide. Only a small proportion of corals observed had mature gametes or spawned (14–35%). Eggs were 185–311 μm in diameter, spherical, homogenous, and provisioned with 95–155 algal cells (family Symbiodiniaceae). Males spawned before females, and ex situ fertilization rates were high for the first 2 h after egg release. Larvae were elliptical, ~300 μm long, and symbiotic. Just 2 days after fertilization, many larvae swam near the bottom of culture dishes and were competent to settle. Settlers began calcification 2 days after metamorphosis, and tentacles were developed 10 days after attachment. Our observations contrast with previous studies by suggesting an abbreviated pelagic larval period in Porites cf. P. lobata, which could lead to the isolation of some populations. The high thermal tolerance and broad geographic range of Porites cf. P. lobata suggest that this species could locally adapt to a wide range of environmental conditions, especially if larvae are locally retained. The results of this study can inform future work on reproduction, larval biology, dispersal, and recruitment in Porites cf. P. lobata, which could have an ecological advantage over less resilient coral species under future climate change.

Possible effects of shipping routes on coral reef degradation and diversity in Karimunjawa Marine National Park, Java Sea

The Karimunjawa Marine National Park, situated in the Java Sea, Indonesia, is renowned for its rich biodiversity and lively coral reefs. However, amidst the backdrop of this natural beauty, concerns have been raised regarding the potential impacts of shipping activities on the health and diversity of these fragile ecosystems. The increase in maritime traffic, including commercial vessels, tourist boats, and fishing vessels, traversing through the Karimunjawa Marine National Park, raises significant environmental concerns. The movement of these vessels, especially along specific shipping routes, has the potential to disturb and damage coral reefs through various mechanisms. Hence, this study aimed to investigate the possible impacts of shipping routes on the coral abundance and diversity and the coral health in the Karimunjawa Islands, Java Sea, Indonesia. This study categorized ship routes into West Route, East Route, and Non-Route and assessed coral health and diversity across 15 islands. Key metrics analyzed included coral disease prevalence, coral cover, diversity index, species richness, relative abundance, and evenness, using 15 × 2 m belt transects at 3 and 8 m depths with three repetitions each. Statistical analysis revealed significant differences in coral abundance and species richness among ship-route groups, but no significant depth-related differences. These results suggest that while shipping routes affect certain aspects of coral health and diversity, other factors may be more influential in shaping coral disease prevalence and overall diversity in Karimunjawa reefs.

Bacterial and Symbiodiniaceae communities’ variation in corals with distinct traits and geographical distribution

Coral microbiomes play crucial roles in holobiont homeostasis and adaptation. The host’s ability to populate broad ecological niches and to cope with environmental changes seems to be related to the flexibility of the coral microbiome. By means of high-throughput DNA sequencing we characterized simultaneously both bacterial (16S rRNA) and Symbiodiniaceae (ITS2) communities of four reef-building coral species (Mussismilia braziliensis, Mussismilia harttii, Montastraea cavernosa, and Favia gravida) that differ in geographic distribution and niche specificity. Samples were collected in a marginal reef system (Abrolhos, Brazil) in four sites of contrasting irradiance and turbidity. Biological filters governed by the host are important in shaping corals’ microbiome structure. More structured associated microbial communities by reef site tend to occur in coral species with broader geographic and depth ranges, especially for Symbiodiniaceae, whereas the endemic and habitat-specialist host, M. braziliensis, has relatively more homogenous bacterial communities with more exclusive members. Our findings lend credence to the hypothesis that higher microbiome flexibility renders corals more adaptable to diverse environments, a trend that should be investigated in more hosts and reef areas.

Classification of Coral Reef Species using Computer Vision and Deep Learning Techniques

Classification of Coral Reef Species using Computer Vision and Deep Learning Techniques

Microscale sampling of the coral gastrovascular cavity reveals a gut-like microbial community

Animal guts contain numerous microbes, which are critical for nutrient assimilation and pathogen defence. While corals and other Cnidaria lack a true differentiated gut, they possess semi-enclosed gastrovascular cavities (GVCs), where vital processes such as digestion, reproduction and symbiotic exchanges take place. The microbiome harboured in GVCs is therefore likely key to holobiont fitness, but remains severely understudied due to challenges of working in these small compartments. Here, we developed minimally invasive methodologies to sample the GVC of coral polyps and characterise the microbial communities harboured within. We used glass capillaries, low dead volume microneedles, or nylon microswabs to sample the gastrovascular microbiome of individual polyps from six species of corals, then applied low-input DNA extraction to characterise the microbial communities from these microliter volume samples. Microsensor measurements of GVCs revealed anoxic or hypoxic micro-niches, which persist even under prolonged illumination with saturating irradiance. These niches harboured microbial communities enriched in putatively microaerophilic or facultatively anaerobic taxa, such as Epsilonproteobacteria. Some core taxa found in the GVC of Lobophyllia hemprichii from the Great Barrier Reef were also detected in conspecific colonies held in aquaria, indicating that these associations are unlikely to be transient. Our findings suggest that the coral GVC is chemically and microbiologically similar to the gut of higher Metazoa. Given the importance of gut microbiomes in mediating animal health, harnessing the coral “gut microbiome” may foster novel active interventions aimed at increasing the resilience of coral reefs to the climate crisis.

Microbiome flexibility enhances the resilience of the potentially invasive coral Tubastraea aurea to abrupt environmental changes: Insights from a shallow water hydrothermal vent transplantation study

To comprehend the effects of potentially invasive coral Tubastraea aurea on marine ecosystems, it is crucial to understand their adaptive strategies to survive environmental changes and perturbations. Therefore, a cross-transplantation study was conducted to assess the microbiome's role in the resilience of T. aurea to sudden environmental changes.Hydrographic analyses revealed distinct ecological conditions at two sites: a hydrothermal vent (HV) site, characterized by harsh environmental conditions serving as a natural laboratory for future oceanic changes, and a regular coastal site Fulong (FU). Both sites showed significant differences in pH, temperature, and dissolved oxygen. Using Oxford Nanopore Technologies, we examined bacterial dynamics in coral tissue, mucus and ambient sediment samples following cross-transplantation experiments. We observed a rapid shift in dominant bacterial groups post-transplantation with transplanted corals acquiring microbiomes similar to native corals from their respective sites within 16 days. The bacteria Endozoicomonas euniceicola and Ruegeria profundi were dominant in both native and transplanted corals, suggesting their critical role in coral resilience. Furthermore, the enrichment of certain bacterial taxa post-transplantation suggests that opportunistic species also contribute to host acclimatization. Functional profiling data indicated that there was site-specific adaptation because corals had acquired beneficial bacterial assemblages to assist them cope with environmental stressors. More specifically, there was a switch towards sulfur and nitrogen metabolism in corals that moved to high sulfidic environments, while corals transplanted into normal coastal environments showed enriched photoautotrophic processes due to their symbionts. Our study underscored the highly flexible microbiome of T. aurea and its pivotal role in facilitating host resilience to environmental perturbations, particularly in the context of its potential invasiveness. Hence, these findings contribute to the understanding of coral-microbiome dynamics and emphasize the necessity of considering microbially-mediated resilience in managing potentially invasive coral species in marine ecosystems around the world, especially as ocean conditions continue to change.

Population genetic structure of Montipora digitata coral-algal symbiosis in the South China Sea

Species genetic diversity can reflect their adaptability to environmental changes. Coral reefs worldwide are in rapid decline due to climate change and human activities, highlighting the need for conservation intervention. The South China Sea (SCS) is an important biodiversity hotspot, particularly in the Xisha Islands (XS) that contain the majority of coral species in the SCS. However, few studies exist on coral genetic diversity in the SCS. Montipora digitata is the dominant reef-building coral species in the XS. In this study, two mitochondrial DNA fragments and 11 microsatellite markers were employed to investigate the genetic diversity of coral host of M. digitata, and ITS amplicon sequencing was employed to investigate the Symbiodiniaceae community structure. We sampled five wild populations of M. digitata in Hainan Island and the Xisha Islands. Montipora digitata showed low genetic diversity across populations in the SCS. We found significant genetic differentiation between the Sanya (SY) and XS populations but no significant genetic differentiation within XS populations. We identified four Symbiodiniaceae genera, with Cladocopium and Durusdinium being the most common, as well as Gerakladium and Fugacium. The Symbiodiniaceae types of SY and XS are significantly different, C15 is abundant in all populations, while D1a is also abundant in SY. We analyzed the correlation between 16 environmental factors and the genetic diversity of symbionts, genetic diversity of coral host and Symbiodiniaceae community was significantly correlated with sea surface temperature (SST) and other environmental factors. Our study provided a detailed paradigm from the perspective of genetic diversity of how a dominant coral species can be indicative of poor environmental adaptation potential.

Three–dimensional matrices for enhanced coral settlement through design for additive manufacturing

Purpose The effects of climate change have been contributing to coral reef degradation. Artificial reefs are one method being used to counteract this destruction. However, the most common artificial approaches, such as sunken vehicles and prefabricated cement reefs, do not allow adequate coral development. This paper aims to demonstrate how designers, using additive manufacturing and computational design techniques, can create artificial reefs that better mimic natural reef structures. Design/methodology/approach This research focuses on developing three-dimensional matrices through computational design using additive manufacturing to achieve better coral settlement. A “Nature Centered Design” approach was followed, with the corals at the center of the design project. Samples with different geometries and roughness, produced using paste-based extrusion with porcelain and porcelain with oyster shell, were tested in a controlled environment to investigate the settlement preference of soft corals. Findings The rapid prototyping of samples confirmed the preference of corals to settle to complex surfaces compared to smooth surfaces. Porcelain showed comparable results to Portland cement, suggesting further testing potential. A closer resemblance to the natural and intricate forms found in coral reefs was achieved through computational design. Originality/value This paper proposes a new approach combining rapid prototyping with coral’s biological responses to enhance the understanding of their surface settlement preference. The Nature Centered Design approach, with additive manufacturing and computational design, made it possible to create an innovative working model that could be customized depending on the implementation area or intended coral species, validating the design approach as a method to support environmental conservation.

Coral Community Composition Linked to Hypoxia Exposure.

Tropical reef ecosystems are strongly influenced by the composition of coral species, but the factors influencing coral diversity and distributions are not fully understood. Here we demonstrate that large variations in the relative abundance of three major coral species across adjacent Caribbean reef sites are strongly related to their different low O2 tolerances. In laboratory experiments designed to mimic reef conditions, the cumulative effect of repeated nightly low O2 drove coral bleaching and mortality, with limited modulation by temperature. After four nights of repeated low O2, species responses also varied widely, from > 50% bleaching in Acropora cervicornis to no discernable sensitivity of Porites furcata. A simple metric of hypoxic pressure that combines these experimentally derived species sensitivities with high-resolution field data accurately predicts the observed relative abundance of species across three reefs. Only the well-oxygenated reef supported the framework-building hypoxia-sensitive Acropora cervicornis, while the hypoxia-tolerant weedy species Porites furcata was dominant on the most frequently O2-deplete reef. Physiological exclusion of acroporids from these O2-deplete reefs underscores the need for hypoxia management to reduce extirpation risk.

Structural and hydrodynamic modelling of the probability of breakage of branching and plate coral colonies

Climate change is amplifying the intensity of severe weather events, with coastal regions such as coral reefs facing heightened vulnerability to cyclonic wave forces. Structural models to predict bending stress and breakage of corals have been developed for coral colonies to enhance comprehension and prediction of the effects of hydrodynamic disturbances on coral reefs. However, there is scope for improving these predictions by evolving the methodology for quantifying complicated and variable coral morphologies. This study aims to predict breakage thresholds for two of the most prevalent coral morphologies: branching and plate corals (using Acropora muricata and Acropora hyacinthus as study species). Laboratory and field measurements were taken to assess coral morphologies and material characteristics. Morphological features of 47 branching colonies and 100 plate colonies were surveyed at the study site (Heron Reef, southern GBR) and the tensile strength of 80 coral samples was obtained by in situ and laboratory testing. Three-dimensional structural models of branching and plate coral colonies were developed, encompassing multiple coral colonies with varying morphological patterns from relatively shallow (5-7 m) to deep (9-12 m) zones. Model results were calibrated and verified with existing data, revealing that velocity thresholds of 1.7 m/s and 5.0 m/s would destroy 90% of the simulated branching coral structures growing in the deep and shallow parts of the forereef zone, respectively. In contrast, the plate corals have sufficient margins of safety even in extreme flow conditions (7 m/s). Additionally, skeletal strength and structural performance were adjusted based on varying degrees of bioerosion inside the coral skeleton. A higher probability of breakage was observed as the extent of bioerosion increased. The laboratory experiments of hydrodynamic loads on coral colony show that the sheltering effect due to one or two neighbouring colonies in the upwave direction is negligible. These models can be easily adjusted to provide predictions for other coral species, shapes, levels of bioerosion, and locations (e.g., sheltered or exposed areas). Comprehensive predictions about the level of expected damage and rubble generation in different areas can be used in reef management planning and restoration prioritization.

Quantification of cytosolic 'free' calcium in isolated coral cells with confocal microscopy.

Despite its prominent role as an intracellular messenger in all organisms, cytosolic free calcium ([Ca2+]i) has never been quantified in corals or cnidarians in general. Ratiometric calcium dyes and cell imaging have been key methods in successful research on [Ca2+]i in model systems, and could be applied to corals. Here, we developed a procedure to quantify [Ca2+]i in isolated cells from the model coral species Stylophora pistillata using Indo-1 and confocal microscopy. We quantified [Ca2+]i in coral cells with and without intracellular dinoflagellate symbionts, and verified our procedure on cultured mammalian cells. We then used our procedure to measure changes in [Ca2+]i in coral cells exposed to a classic inhibitor of [Ca2+]i regulation, thapsigargin, and also used it to record elevations in [Ca2+]i in coral cells undergoing apoptosis. Our procedure paves the way for future studies into intracellular calcium in corals and other cnidarians.

Endolithic Algae (Ostreobium) Diversity in Porites Corals at the Western Atlantic and Tropical Eastern Pacific

ABSTRACTOstreobium comprises endolithic algae commonly seen in conjunction with scleractinian corals. In the past, it was solely recognized as a coral skeleton bioeroder. Their relationship with corals is critical because they give photosynthetic byproducts and help the coral when it loses its primary symbionts due to stress. The variety of these algae in coral species of the genus Porites in the Tropical Eastern Pacific and western Atlantic was investigated. Ostreobium samples from seven Porites species including two from the Tropical Eastern Pacific (TEP) (P. panamensis and P. lobata) and five from the Caribbean (P. furcata, P. porites, P. colonensis, P. branneri, and P. astreoides) were extracted. Published rbcL sequences from algae found within various coral species from other parts of the world were also compared. A biogeographic analysis and two methodologies, PTP (Poisson tree process) and GMYC (general mixed Yule‐coalescent), were used to delineate the different species. The findings revealed a significant degree of genetic diversity within Ostreobium, with more than 15 groups of not more than three individuals and 40 individual lineages. Its origins date back to the Ordovician, 500 Ma, and it does not appear to preserve host specificity. The sampled locations still have a wide variety of Ostreobium. Biogeographically patterns were also confirmed, making it impossible to pinpoint the precise origins of most clades. The ancestry analyses revealed convergent events for not only the emergence of Ostreobium in a few genera of local corals, but also the phenomenon occurred in genera from far‐off places.