Multilayer composite films are suitable for high-temperature and high-electric-field insulation, but the accumulation of space charge may lead to the degradation of their insulating properties. However, few studies have been reported on space charge distribution in multilayer composite thin films due to the limitations of space charge measurement techniques. In this study, using Al2O3/PI and BOPP/PI composite structural samples as numerical examples, we proposed a method for calibrating electric fields in multilayer heterogeneous structures and combined it with the Tikhonov regularization algorithm, and successfully reconstructed the electric field distribution inside the samples. Based on this, the experimental results show that the reconstruction of the overall electric field in the BOPP/PI composite samples is consistent with the combined electric field reconstructed after the individual measurements of each layer, which further confirms the feasibility and validity of the use of thermal pulse to measure the charge distribution in multilayer heterogeneous composite films.