Southern Giant Petrels Macronectes Giganteus Research Articles

Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian.

Simple SummaryThe southern giant petrel Macronectes giganteus is one of key species on the Antarctic and sub-Antarctic regions. We reported the whole genome of M. giganteus for understanding the evolutionary mechanisms on Antarctic environments and for studying a more effective genetic monitoring of threatened species. The M. giganteus genome was 1.248 Gb in size with a scaffold N50 length of 27.4 Mb and a longest scaffold length of 120.4 Mb, and its genome contains 14,993 predicted protein-coding genes. The estimated historical effective population size of southern giant petrel underwent a severe reduction during a period coinciding with the early Pleistocene. The M. giganteus showed genomic expansion related to maintenance of energy homeostasis, being essential for survival and effective functioning in cold environments. Moreover, we employed a classification of microsatellite markers for studying the genetic diversity within and among populations. Genomic research of this first Antarctic bird helps to address the environmental adaptation and evolution of avian species.The southern giant petrel Macronectes giganteus, a large seabird of the southern oceans, is one of only two members of the genus Macronectes and is the largest species in the order Procellariiformes. Although these two families account for the vast majority of the avian fauna inhabiting the Antarctic and sub-Antarctic regions, studies on the status of some populations and the associated genetic data are currently extremely limited. In this study, we assembled the genome of M. giganteus by integrating Pacific Biosciences single-molecule real-time sequencing and the Chromium system developed by 10x Genomics. The final M. giganteus genome assembly was 1.248 Gb in size with a scaffold N50 length of 27.4 Mb and a longest scaffold length of 120.4 Mb. The M. giganteus genome contains 14,993 predicted protein-coding genes and has 11.06% repeat sequences. Estimated historical effective population size analysis indicated that the southern giant petrel underwent a severe reduction in effective population size during a period coinciding with the early Pleistocene. The availability of this newly sequenced genome will facilitate more effective genetic monitoring of threatened species. Furthermore, the genome will provide a valuable resource for gene functional studies and further comparative genomic studies on the life history and ecological traits of specific avian species.

Skull morphology and ontogenetic variation of the Southern Giant Petrel Macronectes giganteus (Aves: Procellariiformes)

The Southern Giant Petrel Macronectes giganteus is the largest Procellariidae around the world. Beyond the most striking features on the skull, the strong hooked bill with tubular, dorsally-placed, external nostrils, these petrels have been the focus of diverse studies, except osteological ones. Even less is known about the osteology in juveniles and chicks. A comparative description of the skull anatomy of the Southern Giant Petrel M. giganteus, highlighting the differences along each postnatal ontogenetic stage, is given here. As a result, we found that the shape of the skull does not vary among the compared stages and that there is a progression in the fusion of the elements of the skull and mandible. Besides, less obvious results show a little intraspecific variation among specimens of the same ontogenetic stage, involving osteological features such as the quantity and shape of foramina within pneumatic bone surfaces, and the fact that general size is not associated with sexual dimorphism. The beak acquires its characteristic development and sturdiness from early stages. Conversely, the fossae glandulae nasalis is only developed in juveniles and adults, being absent in earlier stages.

Review of diseases (pathogen isolation, direct recovery and antibodies) in albatrosses and large petrels worldwide

SummaryAlbatrosses (Diomedeidae) and large petrels (MacronectesandProcellariaspp.) are among the world’s most rapidly declining birds. Some of the most endangered species, Amsterdam AlbatrossDiomedea amsterdamensis,Indian Yellow-nosed AlbatrossThalassarche carteriand Sooty AlbatrossPhoebetria fusca, are at risk from recurrent avian cholera outbreaks. Yet little is known about the overall impact of disease in this group. We compiled all available information on pathogens described in albatrosses and large petrel species listed under the Agreement on the Conservation of Albatrosses and Petrels (ACAP) (n= 31). Available reports (n= 53) comprise nearly 60% of ACAP species (18/31). However, only 38% of them focus on threatened species (20/53), and 43% solely report macroparasite findings (23/53). Black-browed AlbatrossThalassarche melanophrys(Near Threatened) and Southern Giant PetrelMacronectes giganteus(Least Concern) are the two species with higher number of publications (29/53, 55% of all papers). Conversely, seven species on the IUCN Red List have three papers or less each. Most existing research has resulted from disease or mortality investigations and baseline studies (28 and 32%, respectively). Pathogens reported in the subset of ACAP species, included bacteria in seven species (39%), viruses in five (28%), protozoa in four (22%), helminths in nine (50%), ectoparasites in 13 (72%) and fungi in one species (5%). Avian cholera, caused by the bacteriumPasteurella multocida, appears as the most severe threat to ACAP species. Infections by poxvirus are the most common viral finding, yet entail lower population level impact. Few serosurveys report pathogen exposure in these species, but add valuable baseline information. There are numerous obvious gaps in species and geographical coverage and likely under-reporting due to remoteness, accessibility and sporadic monitoring. This insufficient knowledge may be hampering effective protection and management of populations at risk. Attention to species currently affected by avian cholera is of utmost priority.

Feather mercury concentrations in Southern Ocean seabirds: Variation by species, site and time

We studied mercury contamination in 25 seabird species breeding along a latitudinal gradient across the Southern Ocean, from Gough Island (40°S) through Marion Island (47°S) to Byers Peninsula (63°S). Total mercury concentrations in body feather samples of adults caught at breeding colonies from 2008 to 2011 were determined. Krill (Euphausia spp.) and other zooplankton consumers had low mercury concentrations (gentoo penguin Pygoscelis papua, chinstrap penguin Pseudomonas Antarctica, common diving petrel Pelecanoides urinatrix, broad-billed prion Pachyptila vittata; mean levels 308–753 ng g−1), whereas seabirds consuming squid or carrion had high mercury concentrations (ascending order: Kerguelen petrel Aphrodroma brevirostris, southern giant petrel Macronectes giganteus, soft-plumaged petrel Pterodroma mollis, sooty albatross Phoebetria fusca, Atlantic petrel Pterodroma incerta, northern giant petrel Macronectes halli, great-winged petrel Pterodroma macroptera; 10,720–28038 ng g−1). The two species with the highest mercury concentrations, northern giant petrels and great-winged petrels, bred at Marion Island. Among species investigated at multiple sites, southern giant petrels had higher mercury levels at Marion than at Gough Island and Byers Peninsula. Mercury levels among Byers Peninsula seabirds were low, in two species even lower than levels measured 10 years before at Bird Island, South Georgia. Replicate measurements after about 25 years at Gough Island showed much higher mercury levels in feathers of sooty albatrosses (by 187%), soft-plumaged petrels (53%) and Atlantic petrels (49%). Concentrations similar to the past were detected in southern giant petrels at Gough and Marion islands, and in northern giant petrels at Marion. There were no clear indications that timing of moult or migratory behavior affected mercury contamination patterns among species. Causes of inter-site or temporal differences in mercury contamination could not be verified due to a lack of long-term data related to species’ diet and trophic levels, which should be collected in future together with data on mercury contamination.

Populations of breeding birds in Byers Peninsula, Livingston Island, South Shetland Islands

AbstractData about breeding populations of birds in the Antarctica are rare and fragmented. Thus, information about the status of the breeding populations of Antarctic birds is crucial given the current scenario of climate change, which is particularly acute in Antarctica. This paper presents new information about the populations of the Antarctic tern Sterna vittata, the kelp gull Larus dominicanus, the southern giant petrel Macronectes giganteus, the Antarctic skua Catharacta antarctica lonnbergi, the chinstrap penguin Pygoscelis antarctica and the gentoo penguin Pygoscelis papua on Byers Peninsula (Livingston Island, South Shetland Islands). We used line transects counts to estimate both densities and numbers of nests of the different species. We estimate that there are 398.96 birds km-2 of southern giant petrels (2793 individuals), 62.4 birds km-2 of Antarctic tern (3746 individuals) and 269.1 birds km-2 of kelp gull (1884 individuals). Furthermore, we found 15 nests of Antarctic skua in 25 km2, from which we can estimate that 60–91 birds must breed on Byers Peninsula. We also censused two colonies of gentoo penguins (3000 and 1200 pairs) and 50 pairs of chinstrap. Compared to previous estimates, gentoo penguins seem to have increased whereas chinstrap penguin have decreased. Finally, the populations of Antarctic tern, southern giant petrel and kelp gull have stabilized or slightly increased.

Census of the Southern Giant Petrel population of the Falkland Islands 2004/2005

AbstractA complete census was taken of all colonies of Southern Giant Petrels Macronectes giganteus within the Falkland Islands in 2004/05. The breeding population of the islands was estimated to be approximately 19,529 pairs (range 18,420–20,377). Southern Giant Petrels were found to breed in 38 locations around the islands, with colony size varying from one to 10,936. The majority of colonies were concentrated around the south of Falkland Sound, and to the west of West Falkland. Whilst there has been no previous census of the total population of the islands, there is a strong indication that the population has increased since the 1950s. The reasons for such an increase in population remain unclear in light of current knowledge. Development of our understanding of the breeding biology and demography of this species in the Falkland Islands is necessary, as is the need to conduct such a census every five years, with a few key colonies to be monitored every season. From the results obtained here, the conservation status of the Southern Giant Petrel, currently listed as ‘Vulnerable’, could be downgraded to ‘Near Threatened’.

Diet of the southern giant petrel in Patagonia: fishery-related items and natural prey

There is an increasing interest in dietary composition of threatened seabirds as an impor- tant key to understanding their feeding ecology, population dynamics and interaction with fisheries. Several seabird species exploit discards from fisheries as their main food. The southern giant petrel Macronectes giganteus is a wide-ranging procellariform. It is considered a near-threatened species under International Union for Conservation of Nature (IUCN) criteria and has been included as a threatened species in the Appendix 2 of the Convention on the Conservation of Migratory Species of Wild Animals. The diet of Patagonian colonies of this species remains unknown, even though under- standing the relationship between southern giant petrels and fisheries may be crucial to the conserva- tion of this species in the Southwestern Atlantic. We describe the diet of the southern giant petrel from north Patagonian colonies using chick regurgitations and evaluate its relationships with the fisheries. Carrion occurred in the diets of 90.8% of birds sampled, while cephalopods occurred in the diets of 65.1%. Crustaceans were present in 43.7% of samples and fishes in 19.4%. Anthropogenic items were found in 72.7% of the samples. The presence in the petrel's diet of target and discarded species from fishery vessels, and the high incidence of marine debris, suggests an extensive use of discard over the Patagonian Shelf. The population of southern giant petrels in northern Patagonia has reached higher, stable levels. Such a population trend could be linked, at least partially, to the use of fisheries discards.

The impact of avian predator‐scavengers on King Penguin Aptenodytes patagonicus chicks at Marion Island

While ashore King Penguins Aptenodytes patagonicus are fed upon by a guild of five predator‐scavenger seabirds. During the winter (April‐October) male Southern Giant Petrels Macronectes giganteus killed an estimated 6430 (11.2%) of Marion Island's King Penguin chicks, although most birds only scavenged in the colonies. The rate of predation varied, with peaks in April‐May and in September. The proportion of successful attacks was 22.7%. There was a strong correlation between colony size and the rate of accumulation of chick corpses. Kelp Gulls Larus dominicanus and Lesser Sheathbills Chionis minor also scavenged penguin corpses but Northern Giant Petrels M. halli and female Southern Giant Petrels rarely entered the colonies. During the summer predation was mainly by Sub‐Antarctic Skuas Catharacta lonnbergi which took eggs and small chicks.

A further contribution on the biology of the Antarctic flea, Glaciopsyllus antarcticus (Siphonaptera: Ceratophyllidae)

Experiments showed that adult Antarctic Fleas Gladopsyllus antarcticus preferred dark over light conditions, dry over wet conditions, and fine substrate over coarse substrate. Examination of seabird chicks and collections of nest material indicated that the Southern Fulmar Fulmarus glacialoides, is the major host species of the Antarctic Flea, while Snow Petrels Pagodroma nivea, Cape Petrels Daption capense, Antarctic Petrels Thalassoica antarctica, and Wilson's Storm-Petrels Oceanites oceanicus are minor hosts. This is the first report of Antarctic Fleas occuring on either Antarctic Petrels or Wilson's Storm-Petrels. No fleas were found associated with Southern Giant Petrels Macronectes giganteus, Antarctic Skuas Catharacta maccormicki, or Adelie Penguins Pygoscelis adeliae. No live fleas were found in Southern Fulmar nest material during their period of dispersal over the winter months, supporting the hypothesis that Antarctic Fleas survive the winter period by remaining on their seabird host.

SOCIAL BEHAVIOUR OF THE SOUTHERN GIANT PETREL

Summary Bretagnolle, V. 1988. Social behaviour of the Southern Giant Petrel, Ostrich 59: 116–125. The social behaviour of Southern Giant Petrels Macronectes giganteus is described after a 15-month field study in Adélie Land, Antarctica. Elementary acts are briefly listed and vocalizations are described for both adults and chicks. All the social displays are described, some for the first time. Social communication is analysed from sequences of “stimulus” and “answer”, as a function of sex, distance separating the birds, and the type of stimulus (agonistic or movement) or answer (agonistic, movement and appeasement). The meaning and function of each display is given, and its structural components are discussed. Comparisons with other species of the order including albatrosses and fulmarine petrels, show that the giant petrels are unique in having an elaborate social system. It is suggested that this results from their large size, diet, breeding behaviour, and diurnal habits.