Source Herd Research Articles

Theileria orientalis Ikeda infection does not negatively impact growth performance or breeding soundness exam results in young beef bulls at bull test stations.

Theileria orientalis Ikeda genotype is an emerging cattle disease in the US. Since 2017, when T. orientalis Ikeda was discovered in beef cattle in two counties in Virginia, cattle infections have risen to include ~67% of Virginia counties and 14 states. Consistent with New Zealand studies, many infected herds in Virginia were >90% positive upon initial testing without overt evidence of infection. Central bull tests present a unique opportunity to study the effects of T. orientalis Ikeda infections, as bulls from multiple source herds are consolidated. The objective of this study was to determine if infection with T. orientalis Ikeda affected the average daily gain (ADG), adjusted yearling weight (AYW) and breeding soundness of bulls at two test stations in Virginia over a period of years. The bulls were fed and housed similarly to compare their growth performance and breeding soundness. For T. orientalis Ikeda testing, DNA was extracted from whole blood for quantitative polymerase chain reaction. The number of bulls infected with T. orientalis Ikeda at initial delivery to the stations increased significantly over the years studied. Multivariable linear regression models, using Angus bulls from Virginia test stations, indicated no significant effect on ADG or AYW in bulls that became test positive during the test or were positive for the duration, compared to Angus bulls that were negative for the duration. At LOC A, the odds of passing a breeding soundness exam (BSE) were not significantly different for bulls that turned positive during the test or were positive for the duration, compared to bulls that were negative for the duration of the test. At LOC B, bulls that became positive during the test were 2.4 times more likely (95% CI: 1.165-4.995, p = 0.016) to pass their BSE compared to bulls that remained negative throughout the test. We do not suppose that an obscured infection of T. orientalis Ikeda is protective for bulls to pass a BSE. However, this study demonstrates an obscured infection of T. orientalis Ikeda does not negatively affect weight gain or achievement of a satisfactory BSE rating at the central bull test stations in Virginia.

Consider the Source: The Impact of Social Mixing on Drylot Housed Steer Behavior and Productivity.

Cattle are a social species in which social mixing can induce physical and psychosocial stress; however, the impact of social mixing on cattle welfare is unknown. Two different sources of genetically similar Angus crossbred steers were transported to the same feedlot and assigned to a pen where they were either socially mixed or housed with individuals from their source herds. Social mixing did not impact average daily gains in pens, feed intake, or feed efficiency; pens of socially mixed steers were more active. Sources differed in their responses to social mixing. One source was unaffected, whereas social mixing negatively impacted productivity for the other source. Irrespective of social mixing, the sources differed in the amount of time per day they spent ruminating and drinking. Group analyses indicated that socially mixing two sources of feedlot steers did not negatively impact group productivity, yet the impacts that were observed at the individual level suggest that prior experiences may influence their ability to cope with social stress, emphasizing the importance of early-life experiences to long-term welfare and productivity. Social mixing was not universally detrimental to cattle welfare, and the source of cattle may have the greatest affect on their performance regardless of whether a social mixing event has occurred.

Experimental facility had a greater effect on growth performance, gut microbiome, and metabolome in weaned pigs than feeding diets containing subtherapeutic levels of antibiotics: A case study.

The objective of this study was to define changes in the intestinal metabolome and microbiome associated with growth performance of weaned pigs fed subtherapeutic concentrations of antibiotics. Three experiments with the same antibiotic treatments were conducted on the same research farm but in two different facilities (nursery and wean-finish) using pigs weaned at 20-days of age from the same source herd and genotype, and fed the same diets formulated without antibiotics (NC) or with 0.01% chlortetracycline and 0.01% sulfamethazine (AB). Pigs were weighed and feed disappearance was determined on days (d) 10, 21, and 42 post-weaning to calculate average daily gain (ADG), average daily feed intake (ADFI), and gain:feed (G:F). On d 42, one pig/pen was selected for blood and ileal and cecal content collection. Targeted and untargeted metabolomic profiles were determined in serum and cecal contents using liquid chromatography-mass spectrometry, and composition of bacterial communities in intestinal content samples was determined by sequencing the V4 region of the 16s rRNA gene. Metabolomics and microbiome data were analyzed using diverse multivariate and machine learning methods. Pigs fed AB had significantly greater (P < 0.05) overall ADG and ADFI compared with those fed NC, and pig body weight, ADG, and G:F were also significantly different (P < 0.05) between experiments. Differences (P < 0.05) in serum metabolome along with ileal and cecal microbiome beta diversity were observed between experiments, but there were no differences in microbiome alpha diversity between experiments or treatments. Bacteria from the families Clostridiaceae, Streptomycetaceae, Peptostreptomycetaceae, and Leuconostocaceae were significant biomarkers for the AB treatment. In addition, pigs fed AB had increased serum arginine, histidine, lysine, and phenylalanine concentrations compared with NC. Percentage error from a random forest analysis indicated that most of the variation (8% error) in the microbiome was explained by the facility where the experiments were conducted. These results indicate that facility had a greater effect on growth performance, metabolome, and microbiome responses than feeding diets containing subtherapeutic levels of antibiotics.

When Theory Meets Practice: Balancing Genetic Diversity and Behaviour When Choosing Founders for a Recently Reintroduced Bison (Bison bison) Herd in Banff National Park, Canada

The tragic decline of plains bison (Bison bison bison) in North America is well known. By the turn of the 20th century, plains bison, once numbering in the tens of millions, were extirpated from the wild in Canada. Banff National Park, AB, Canada, is within the original range of bison in North America, and still contains suitable habitat for the species. In 2017, we used measures of genetic diversity, as well as age and reproductive status, to select 16 plains bison for reintroduction to an unoccupied corner of their former historic range in Banff National Park. However, five of the preferred founders from this genetically diverse group needed to be substituted for less ideal candidates when aggressive behavior was observed, which could have compromised animal welfare during translocation. The level of genetic diversity in the founding population was therefore lower than if all proposed founders had been used, although the difference was not substantial. As expected, adults in this small, reintroduced herd had lower observed heterozygosity and number of alleles than the larger source herd, but expected heterozygosity was higher, likely a result of preferentially choosing individuals with rare alleles. Another substantial contribution to genetic diversity was in unborn fetuses: sired by males that were not translocated, the calves born a few months later provided a boost to the genetic diversity of this small founder herd. Where opportunities allow, the inclusion of pregnant females can significantly increase the genetic diversity of small founder populations. When compared to other founded herds of bison, the techniques described here have ensured that the newly established Banff NP herd is one of the most diverse bison herds in Canada, despite its relatively small number of founders.

Can Ingoing Contact Chains and other cattle movement network metrics help predict herd-level bovine tuberculosis in Irish cattle herds?

We used logistic regression to investigate whether the risk of an Irish cattle herd undergoing a bovine tuberculosis (bTB) breakdown increased with the size of the Ingoing Contact Chain (ICC) of previous herd to herd cattle movements, in a sequence up to eight moves back from the most recent, direct, movement into the herd. We further examined whether taking into account the bTB test history of each herd in the chain would improve model fit. We found that measures of cattle movements directly into the herd were risk factors for subsequent bTB restrictions, and the number of herds that animals were coming from was the most important of these. However, in contrast to a previous study in Great Britain, the ICC herd count at steps more remote than direct movements into the herd did not result in better fitting models than restricting the count to direct movements. Restricting the ICC counts to herds which had previously or would in the future test positive for bTB resulted in improved model fits, but this was not the case if only the previous test status was considered. This suggests that in many cases bTB infected animals are moving out of herds before being identified through testing, and that risk-based trading approaches should not rely solely on the previous test history of source herds as a proxy for future risk. Model fit was also improved by the inclusion of variables measuring bTB history of the herd, bTB in neighbouring herds, herd size, herd type, the movement network measures “in strength” and “betweenness”, altitude, modelled badger abundance and county. Rainfall was not a good predictor. The most influential measures of bTB in nearby herds (a proxy for neighbourhood infection) were the proportion of herds with a history of bTB whose centroids were within 6 km, or whose boundaries were within 4 km, of the index herd. As well as informing national control and surveillance measures, our models can be used to identify areas where bTB rates are anomalously high, to prompt further investigation in these areas.

PSIII-A-14 Lysophospholipids Supplementation Increases Growth Performance and hot Carcass Weight in Finishing Beef Steers

Abstract The objectives were to evaluate the effects of lysophospholipids supplementation on growth performance and carcass traits of finishing beef steers. Simmental x Angus steers (n = 126; BW 246 ± 30.8 kg) from two contemporary groups were utilized in a randomized complete block design. Steers were blocked by BW, stratified by sire and source herd, and allotted into 21 pens with 6 steers each. Pens (7 pens per treatment) were randomly assigned to 1 of 3 dietary treatments: 0 g (LPL0), 5 g (LPL5) or 10 g (LPL10) of lysophospholipids per steer daily (Lipidol® Ultra; Pathways Intermediates USA, LLC). Treatments were delivered via a ground corn-based supplement (0.45 kg/hd) which was added to a dry rolled corn-based finishing ration fed in GrowSafe bunks. After 210 days, steers were slaughtered at a commercial abattoir. Data were analyzed using MIXED procedure of SAS 9.4 with fixed effects of dietary treatment and block, and random effects of herd source and pen nested within treatment. Overall, final BW was greater (P = 0.01) in steers fed LPL5 (651 kg) and LPL10 (648 kg) compared with LPL0 (627 kg). Moreover, steers fed LPL0 had decreased (P = 0.01) ADG compared with LPL5 and LPL10. No treatment differences were observed in dry matter intake or gain:feed (P &amp;gt; 0.16). Steers fed LPL5 (399 kg) and LPL10 (399 kg) had increased (P = 0.05) hot carcass weight compared with those fed LPL0 (387 kg). Additionally, steers fed LPL10 tended to have a greater (P = 0.06) dressing percentage than LPL5. In conclusion, lysophospholipids fed at 5 or 10 g per steer daily increased growth performance and hot carcass weight in finishing beef steers.

Predation impedes recovery of Sierra Nevada bighorn sheep

Translocation of animals into formerly occupied habitat is a key element of the recovery plan for Sierra Nevada bighorn sheep (Ovis canadensis sierrae), which are state (California) and federally listed as endangered. However, implementing Sierra bighorn translocations is a significant conservation challenge because of the small size of the extant population and the limited number of herds available to donate translocation stock. One such herd, the Mt. Langley herd, recently became unusable as a translocation source following a substantial population decline. At the time of listing in 1999, predation by mountain lions (Puma concolor; hereafter lion) was considered a primary threat to Sierra bighorn, and since then lion predation may have continued to limit the ability of source herds to provide translocation stock. We evaluated the relationship between lion predation and ewe survival rates within three source herds of the Southern Recovery Unit, compared lion abundance and ewe survival among years of varying predation levels, provided a range of estimated times for the Mt. Langley herd to recover to its former status as a translocation source, and determined if the rates lions have been removed to mitigate Sierra bighorn predation exceeded sustainable harvest guidelines. We found compelling evidence that lion predation has impeded the recovery of Sierra bighorn by reducing survival rates of adult ewes (and consequently, population growth) and by preying upon individuals that could have otherwise been translocated. Ewe survival was poor during years of extreme predation but even during years of typical predation, survival rates were below a level needed to ensure population growth, indicating that years with little or no lion predation may be necessary for the population to grow and meet recovery goals. Because the intensity of predation was related to lion abundance, monitoring lion populations could provide managers with advance warning of periods of extreme predation. We found that following a period of particularly extreme predation, the Mt. Langley herd decreased in abundance far below the threshold needed to be considered a source of translocation stock, resulting in the loss of approximately 25% of the recovery program’s capacity for translocations. It is unclear how many years it will take for this herd to recover, but management actions to reduce lion predation are likely needed for this herd to grow to a size that can afford to donate individuals to translocation efforts in the near future, even when optimistic growth rates are assumed. We found that lion removal may also be needed to prevent predation from leading to Sierra bighorn population decline. Lion removal rates that have been implemented thus far are well below what would be needed to reduce the abundance the eastern Sierra lion population itself. We recommend continued monitoring of Sierra bighorn and sympatric lions and note that lion removal may be required to facilitate bighorn recovery for the foreseeable future.

Genetic Diversity and Divergence among Bighorn Sheep from Reintroduced Herds in Washington and Idaho

ABSTRACTBighorn sheep (Ovis canadensis) populations in the western United States have undergone widespread declines and extirpations since the late nineteenth century as a consequence of introduced diseases, competition with livestock, and unregulated hunting. Washington, Idaho, USA, and British Columbia, Canada were historically thought to be occupied by 2 bighorn lineages or subspecies: Rocky Mountain (O. c. canadensis) and California (O. c. californiana). The putative California lineage was completely extirpated in the United States, and reintroductions to reestablish populations were sourced directly or indirectly from a single region in southern British Columbia. Restoration efforts have attempted to maintain the diversity and divergence of these 2 lineages, sometimes referred to as subspecies although taxonomic classifications have changed over time. In this study we describe genetic variation in a subset of native and reintroduced herds of California and Rocky Mountain bighorn sheep. We examined genetic diversity and divergence between bighorn sheep herds using 15 microsatellite loci, including 4 loci linked to genes involved in immune function. We analyzed 504 samples from reintroduced herds in Washington (n = 10 California herds, n = 4 Rocky Mountain herds) and Idaho (n = 5 California), and source herds in Oregon (n = 1 Rocky Mountain) and British Columbia (n = 5 California, 1 Rocky Mountain). Genetic structure reflected known reintroduction history, and geographic proximity also was associated with decreased genetic divergence. Herds in Washington and Idaho sourced from California bighorn sheep were less genetically diverse than those sourced from Rocky Mountain herds. Also, levels of relatedness within and across California herds were higher than in Rocky Mountain herds and similar to what would be expected for full and half siblings. Lower diversity and higher relatedness among California herds is a concern for long‐term fitness and likely related to past population bottlenecks, fewer source populations, and management history, such as entirely sourcing California herds from British Columbia. Genetic divergence of neutral loci between California and Rocky Mountain herds was greater than that of adaptive loci, potentially indicating that balancing selection has maintained similar genetic diversity across lineages in loci associated with immune and other adaptive functions. Thus, we recommend future reintroductions and augmentations should continue to use source populations from the appropriate California or Rocky Mountain lineage to avoid potential outbreeding depression and maintain possible adaptive differences. This could be accomplished by obtaining sheep from ≥1 source within the genetic lineage, while avoiding sourcing from admixed herds. Future work encompassing a broader geographic sampling of populations and a greater portion of the genome is necessary to better evaluate the degree to which contemporary divergence between lineages is associated with recent founder effects and genetic isolation or evolutionary adaptation. © 2021 The Wildlife Society

Bighorn Sheep Genetic Structure in Wyoming Reflects Geography and Management

ABSTRACTAligning wildlife management boundaries with accurate biological units promotes effective conservation and management practices that reflect ecological and evolutionary processes. Neutral genetic markers allow for quantitative delineation of population structure without a priori assumptions or biases. In the United States, bighorn sheep (Ovis canadensis) are a charismatic component of Wyoming's biodiversity and a species that provides important viewing and hunting opportunities. Bighorn sheep abundances are relatively stable throughout Wyoming, and the species is managed by administrative units identified using expert knowledge, distribution and movement data, and geographic and administrative boundaries. We used a panel of 38 variable microsatellite loci and 512 base pairs of mitochondrial DNA sequence to identify the genetic structure throughout the state and in translocation source herds, quantify the extent of genetic diversity within each genetic cluster, and estimate the degree of gene flow among herds using blood and tissue samples collected 1989–2017. We identified genetic structure of Rocky Mountain bighorn sheep in the major mountain ranges of Wyoming, with strong support for ≥5 genetic clusters using microsatellite loci. These genetic clusters generally aligned with current management units, whereas mitochondrial data showed a more complex mosaic that was not geographically patterned. Genetic variation estimated from both markers was high within each herd and comparable among herds. The assignment of individuals reflected a combination of geographic isolation and translocation, which has been extensive. Our results provide a state‐wide assessment of genetic diversity and structure that will enhance management by understanding the outcomes of translocation, identifying the source of unknown individuals, and parameterizing disease ecology models. © 2020 The Wildlife Society.

Risk factors for the infection with Brachyspira hyodysenteriae in pig herds

Swine dysentery (SD), caused by infection with Brachyspira hyodysenteriae, is a serious disease in pig production worldwide. Quantitative risk factors triggering the occurrence of infection are unknown. The present case-control study aimed at identifying major risk factors related to presence of B. hyodysenteriae in pig herds. Twenty case herds and 60 randomly selected control herds with a minimum herd size of ‘10 sows/ 80 fattening pigs’ were examined by means of a questionnaire-based interview and a herd examination. Herds with previous eradication of SD were excluded. Logistic regression models revealed that the ‘positive/suspicious SD status of source herds’, the regular application of treatment, purchasing more than 4 batches/ year, contact to foxes, diagnostics performed during last 12 months, liquid feeding systems, rats on farm, and >250 fatting places were associated with higher chances of a herd to be infected. On the contrary, having different sources of grower pigs within one batch, the presence of raptor birds and the presence of martens in the region were associated with fewer chances of being infected. The final multivariable logistic regression model identified purchasing more than 4 batches/ year (OR = 7.5, 95 % CI 1.8–54.3) and contact to foxes (OR = 5.9; 97.5 % CI 1.2–34.6) as the two main risk factors in our study. ‘More than 4 batches/ year’ implies continuous herd management supporting persistence of B. hyodysenteriae in an infected herd, but also increased number of purchases each increasing the risk of B. hyodysenteriae introduction by carrier pigs or transport vehicles. Foxes might be infected with B. hyodysenteriae by feeding on positive piglets and rodents. Besides, ‘contact to foxes’ might represent a lack in biosecurity. In conclusion, the risk factors detected underline the importance of biosecurity in SD prevention and control.

Effects of dietary soy isoflavones and soy protein source on response of weanling pigs to porcine reproductive and respiratory syndrome viral infection.

Porcine reproductive and respiratory syndrome virus (PRRSV) is the most prevalent disease of swine globally. Infection of weanling pigs with PRRSV leads to a complex immune response resulting in significant disease and decreased growth performance. Previous experimental evidence suggests that increasing concentrations of soybean meal in the diet of young pigs confer benefits in terms of growth performance and immune parameters. The objective of this experiment was to identify potential modes of action for this benefit, specifically the ability for soy-derived isoflavones (ISF) to confer immunological benefits to young pigs infected with PRRSV. Four dietary treatments differing in soy protein source (soy protein concentrate vs. enzyme-treated soybean meal) and ISF supplementation (none vs. 1,500 mg total ISF/kg) were fed; the control diet (CON) contained soy protein concentrate and no supplemental ISF. Weanling pigs (60 barrows, 21 d of age, 5.71 ± 0.44 kg) from a naturally Mycoplasma hyopneumoniae (Mh)-infected source herd were individually housed in disease containment chambers and provided ad libitum access to experimental diets for 7 d before receiving either a sham inoculation or a 9.28 × 103 50% tissue culture infective dose of PRRSV at 28 d of age (0 d postinoculation). A total of 5 experimental treatments included an uninfected group receiving the CON diet, plus four infected groups each receiving a different dietary treatment. Growth performance and rectal temperatures were recorded throughout the study, and blood was collected for quantification of serum PRRSV load, presence of anti-PRRSV antibodies, differential complete blood counts, cytokine concentrations, and T-cell immunophenotyping. Data were analyzed as a 2-way or 3-way ANOVA for all treatments including PRRSV-infected pigs, in addition to a single degree of freedom contrast to compare uninfected and infected pigs receiving the CON diet. PRRSV-infection reduced growth rate and efficiency compared with noninfected controls with minimal influences by ISF. Supplemental ISF reduced PRRSV-induced band neutrophilia and improved cytotoxic-to-helper T-cell ratios. These results suggest that ISF contribute to activation of adaptive immune system pathways and could benefit recovery from and clearance of PRRSV infections.

The genetic legacy of 50 years of desert bighorn sheep translocations.

Conservation biologists have increasingly used translocations to mitigate population declines and restore locally extirpated populations. Genetic data can guide the selection of source populations for translocations and help evaluate restoration success. Bighorn sheep (Ovis canadensis) are a managed big game species that suffered widespread population extirpations across western North America throughout the early 1900s. Subsequent translocation programs have successfully re‐established many formally extirpated bighorn herds, but most of these programs pre‐date genetically informed management practices. The state of Nevada presents a particularly well‐documented case of decline followed by restoration of extirpated herds. Desert bighorn sheep (O. c. nelsoni) populations declined to less than 3,000 individuals restricted to remnant herds in the Mojave Desert and a few locations in the Great Basin Desert. Beginning in 1968, the Nevada Department of Wildlife translocated ~2,000 individuals from remnant populations to restore previously extirpated areas, possibly establishing herds with mixed ancestries. Here, we examined genetic diversity and structure among remnant herds and the genetic consequences of translocation from these herds using a genotyping‐by‐sequencing approach to genotype 17,095 loci in 303 desert bighorn sheep. We found a signal of population genetic structure among remnant Mojave Desert populations, even across geographically proximate mountain ranges. Further, we found evidence of a genetically distinct, potential relict herd from a previously hypothesized Great Basin lineage of desert bighorn sheep. The genetic structure of source herds was clearly reflected in translocated populations. In most cases, herds retained genetic evidence of multiple translocation events and subsequent admixture when founded from multiple remnant source herds. Our results add to a growing literature on how population genomic data can be used to guide and monitor restoration programs.

Herd level estimation of probability of disease freedom applied on the Norwegian control program for bovine respiratory syncytial virus and bovine coronavirus

A national control program against bovine respiratory syncytial virus (BRSV) and bovine coronavirus (BCV) was launched in Norway in 2016. A key strategy in the program is to test for presence of antibodies and protect test-negative herds from infection. Because these viruses are endemic, the rate of re-introduction can be high, and a disease-free status will become more uncertain as time from testing elapses. The aim of this study was to estimate the probability of freedom (PostPFree) from BRSV and BCV antibodies over time by use of bulk tank milk (BTM) antibody-testing, geographic information and animal movement data, and to validate the herd-level estimates against subsequent BTM testing.BTM samples were collected from 1148 study herds in West Norway in 2013 and 2016, and these were analyzed for BRSV and BCV antibodies. PostPFree was calculated for herds that were negative in 2013/2014, and updated periodically with new probabilities every three months. Input variables were test sensitivity, the probability of introduction through animal purchase and local transmission. Probability of introduction through animal purchase was calculated by using real animal movement data and herd prevalence in the region of the source herd. The PostPFree from the final three months in 2015 was compared to BTM test results from March 2016 using a Wilcoxon Rank Sum Test.The probability of freedom was generally high for test-negative herds immediately after testing, reflecting the high sensitivity of the tests. It did however, decrease with time since testing, and was greatly affected by purchase of livestock. When comparing the median PostPFree for the final three months to the test results in 2016, it was significantly lower (p < 0.01) for test positive herds. Furthermore, there was a large difference in the proportion of test positive herds between the first and fourth quartile of PostPFree. The results show that PostPFree provides a better estimate of herd-level BTM status for both BRSV and BCV than what can be achieved by relying solely on the previous test-result.

Bulk tank milk antibody ELISA as a biosecurity tool for detecting dairy herds with past exposure to Mycoplasma bovis

In Australia, one of the biosecurity recommendations to help prevent the introduction of Mycoplasma bovis into a dairy herd is to use a PCR assay on bulk tank milk (BTM) samples to evaluate the M. bovis infection status of potential source herds. An alternative approach is to assess the immunological status of the herd with respect to previous exposure to M. bovis via the use of an ELISA that is commercially available for use on cattle milk and serum. The objectives of this study were to (1) evaluate factors potentially associated with variation in the ELISA BTM optical density coefficient (ODC%) in previously exposed herds, (2) evaluate the association between the proportion of cows that are ELISA positive and the BTM ELISA ODC%, (3) assess agreement between the BTM ELISA and PCR and culture, and (4) compare BTM ELISA ODC% between the "hospital" herd and the main lactating herd on the same farm. Bulk tank milk samples (n = 192) were collected from 19 dairy herds with a history of clinical M. bovis disease and from 6 control herds (herds with no known clinical cases of mycoplasmosis). For 28 of the BTM samples collected, blood was also collected from 50 lactating cows contributing to that bulk tank sample. From 1 herd, concurrent paired BTM samples were collected from the main herd and the hospital herd on 16 occasions. All BTM samples were analyzed by ELISA (Bio-X Bio K 302, Bio-X Diagnostics, Rochefort, Belgium), PCR, and culture. The BTM ELISA ODC% was associated with time since initial M. bovis outbreak and time since the start of the herd's calving period. Following an initial outbreak of M. bovis, the BTM ELISA ODC% was highest in the first 8 mo. In split- and seasonal-calving herds, significantly higher BTM ELISA ODC% results were observed 5 to 8 wk after the commencement of the calving period. A significant association was observed between the within-herd seroprevalence for the lactating herd and BTM ELISA ODC%, but within-herd seroprevalence explained little of the variation in BTM ELISA ODC%. When comparing the BTM ELISA with a multiplex probe PCR and culture followed by 16S to 23S rRNA sequencing, there was virtually no agreement above that expected by chance; prevalence-adjusted bias-adjusted kappa values were 0.22 and 0.25 for ELISA category versus PCR category and culture, respectively. Finally, the hospital herd BTM ELISA ODC% mirrored that for the main herd BTM but was significantly higher. This study demonstrates that this commercially available ELISA used on BTM samples may complement the use of BTM PCR or culture in identifying herds from which purchase of animals may pose a higher biosecurity risk for introduction of M. bovis into noninfected herds.

Theoretical value of pre-trade testing for Salmonella in Swedish cattle herds

The Swedish Salmonella control programme includes mandatory action if Salmonella is detected in a herd. The aim of this study was to assess the relative value of different strategies for pre-movement testing of cattle.Three fictitious herds were included: dairy, beef and specialised calf-fattening. The yearly risks of introducing Salmonella with and without individual serological or bulk milk testing were assessed as well as the effects of sourcing animals from low-prevalence areas or reducing the number of source herds.The initial risk was highest for the calf-fattening herd and lowest for the beef herd. For the beef and dairy herds, the yearly risk of Salmonella introduction was reduced by about 75% with individual testing. Sourcing animals from low-prevalence areas reduced the risk by >99%. For the calf-fattening herd, the yearly risk was reduced by almost 50% by individual testing or sourcing animals from a maximum of five herds.The method was useful for illustrating effects of risk mitigation when introducing animals into a herd. Sourcing animals from low-risk areas (or herds) is more effective than single testing of individual animals or bulk milk. A comprehensive approach to reduce the risk of introducing Salmonella from source herds is justified.

A comprehensive microbiological safety approach for agarose encapsulated porcine islets intended for clinical trials.

BackgroundThe use of porcine islets to replace insulin‐producing islet β‐cells, destroyed during the diabetogenic disease process, presents distinct challenges if this option is to become a therapeutic reality for the treatment of type 1 diabetes. These challenges include a thorough evaluation of the microbiological safety of the islets. In this study, we describe a robust porcine islet‐screening program that provides a high level of confidence in the microbiological safety of porcine islets suitable for clinical trials.MethodsA four‐checkpoint program systematically screens the donor herd (Large White – Yorkshire × Landrace F1 hybrid animals), individual sentinel and pancreas donor animals and, critically, the islet macrobeads themselves. Molecular assays screen for more than 30 known viruses, while electron microscopy and in vitro studies are employed to screen for potential new or divergent (emergent) viruses.ResultsOf 1207 monthly samples taken from random animals over a 2‐year period, only a single positive result for Transmissible gastroenteritis virus was observed, demonstrating the high level of biosecurity maintained in the source herd. Given the lack of clinical signs, positive antibody titers for Porcine reproductive and respiratory syndrome virus, Porcine parvovirus, and Influenza A confirm the efficacy of the herd vaccination program. Porcine respiratory coronavirus was found to be present in the herd, as expected for domestic swine. Tissue homogenate samples from six sentinel and 11 donor animals, over the same 2‐year period, were negative for the presence of viruses when co‐cultured with six different cell lines from four species. The absence of adventitious viruses in separate islet macrobead preparations produced from 12 individual pancreas donor animals was confirmed using validated molecular (n = 32 viruses), in vitro culture (cells from four species), and transmission electron microscopy assays (200 cell profiles per donor animal) over the same 2‐year period. There has been no evidence of viral transmission following the implantation of these same encapsulated and functional porcine islets into non‐immunosuppressed diabetic cynomolgus macaques for up to 4 years. Isolated peripheral blood mononuclear cells from all time points were negative for PCV (Type 2), PLHV, PRRSV, PCMV, and PERV‐A, PERV‐B, and PERV‐C by PCR analysis in all six recipient animals.ConclusionThe four‐checkpoint program is a robust and reliable method for characterization of the microbiological safety of encapsulated porcine islets intended for clinical trials.

PRESENCE OF MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS IN ALPACAS (LAMA PACOS) INHABITING THE CHILEAN ALTIPLANO.

Mycobacterium avium subsp. paratuberculosis (MAP) is the etiologic agent of paratuberculosis. The organism causes disease in both domestically managed and wild ruminant species. South American camelids have a long, shared history with indigenous people in the Andes. Over the last few decades, increasing numbers of alpacas were exported to numerous countries outside South America. No paratuberculosis surveillance has been reported for these source herds. In this study, individual fecal samples from 85 adult alpacas were collected from six separate herds in the Chilean Altiplano. A ParaTB mycobacterial growth indicator tube (MGIT) liquid culture of each individual fecal sample, followed by real-time polymerase chain reaction (PCR) protocol was used for confirmation. DNA extracts from a subset of confirmed MAP isolates were subjected to mycobacterial interspersed repetitive units-variable number of tandem repeats (MIRU-VNTR) typing. Fifteen alpaca were fecal culture test-positive. Five false-positive culture samples were negative on PCR analysis for Mycobacterium avium subsp. avium (MAA), Mycobacterium bovis (M. bovis), and the 16 S rDNA gene. Three MAP isolates subset-tested belonged to the same MIRU-VNTR type, showing four repeats for TR292 (locus 1) in contrast to the three repeats typical of the MAP reference strain K10. The number of repeats found in the remaining loci was identical to that of the K10 strain. It is not known how nor when MAP was introduced into the alpaca population in the Chilean Altiplano. The most plausible hypothesis to explain the presence of MAP in these indigenous populations is transmission by contact with infected domestic small ruminant species that may on occasion share pastures or range with alpacas. Isolation of this mycobacterial pathogen from such a remote region suggests that MAP has found its way beyond the confines of intensively managed domestic agriculture premises.

Characteristics of replacement breeding cattle trade in Great Britain

The movements of replacement breeding cattle have been implicated in the spread of many economically important cattle diseases. In this analysis, records from the Cattle Tracing System database were used...

Pig-islet xenotransplantation: recent progress and current perspectives.

Islet xenotransplantation is one prospective treatment to bridge the gap between available human cells and needs of patients with diabetes. Pig represents an ideal candidate for obtaining such available cells. However, potential clinical application of pig islet still faces obstacles including inadequate yield of high-quality functional islets and xenorejection of the transplants. Adequate amounts of available islets can be obtained by selection of a suitable pathogen-free source herd and the development of isolation and purification method. Several studies demonstrated the feasibility of successful preclinical pig-islet xenotransplantation and provided insights and possible mechanisms of xenogeneic immune recognition and rejection. Particularly promising is the achievement of long-term insulin independence in diabetic models by means of distinct islet products and novel immunotherapeutic strategies. Nonetheless, further efforts are needed to obtain much more safety and efficacy data to translate these findings into clinic.

Paratuberculosis or avian tuberculosis in red deer with chronic diarrhea?

SUMMARY Mycobacterium avium subsp. paratuberculosis ( Map ) is the etiological agent of paratuberculosis. In Chile, information about Map isolation from both domestic ruminant and wildlife species has been accumulating, but it has extended to other species. In Chile, deer farming activity has been focused in hunting and meat production. No paratuberculosis surveillance has been reported for these source herds. In the present study, chronic diarrhea and poor body condition in some animals belonging to a deer farm was informed. Four adult affected hinds were euthanized under suspicion of paratuberculosis. In all animals macroscopic and microscopic lesions consistent with paratuberculosis were observed. Map -positive culture results from faecal and tissue samples, complemented with positive-PCR-results from fixed tissues are informed. Evidence has been found on cattle and deer populations being connected since molecular characterization of the Map isolated from deer lack of variation between the cattle control strain. The latter could indicate that both species share the same bacteria, suggesting there is interspecies transmission. Complementary diagnostic methods were accurate to diagnose paratuberculosis and to differentiate the clinical deer case from other mycobacterial infection. The epidemiological findings suggest that the infection in the deer farm could be transmitted from a cattle herd, making this the first reported case of paratuberculosis in deer farm in Chile.