This paper proposes a complex number representation method for dynamically recording robot positions and develops an optimization strategy for measuring and minimizing inter-robot distances in real-time. Based on this, the optimization strategy is transformed into finding the theoretical solution of the complex time-varying matrix equation by combining the leader–follower frameworks, and a complex zeroing neural dynamics (CZND) model is proposed for this objective. Meanwhile, the effectiveness of the proposed CZND model and the ideal trajectories of the follower robots are ensured and given through rigorous theoretical analyses. Subsequently, these theoretical findings are validated by two numerical experiments (four cases). In addition, the superiority of the CZND model for inter-robot management tasks is comparatively analyzed from three perspectives: initial positions, number of follower robots, and design parameters. Compared to conventional gradient-based neural network (CGNN) methods, the proposed CZND model, based on a dynamic error function (which is not required to be non-negative as in CGNN), demonstrates improved handling of the dynamic behavior of the system by utilizing the first-order time derivatives of matrices, resulting in lower residual errors in the implementation of inter-robot management. Specifically, for the same inter-robot management task, the steady-state error implemented by CZND is on the order of 10−4, whereas for CGNN, it is on the order of 10−1, indicating a significantly larger lagging error.