Solid-phase Resin Research Articles

Polyphenol content in tobacco (N. tabacum L.) and antioxidant activity

The aim of the present work is to determine the content of polyphenols in tobacco varieties and to investigate the antioxidant activity in tobacco extracts. Bulgarian tobacco varieties from the Basmi and Kabakulak variety groups produced conventionally and biologically, were used. Two types of extracts were investigated - crude extracts obtained by four solvents - 100% CH3OH, 60% CH3OH, H2O, and 96% C2H5OH, and purified extracts obtained by further purification of crude 60% methanolic extract using two techniques - solid phase extraction (SPE) and resin purification, Tobaccos from the variety group Basmi, conventionally grown, have a higher polyphenol content compared to the tobaccos from variety group Kabakulak. No significant difference was observed in the polyphenol contents of in conventionally and organically grown tobaccos of the same variety. The content of phenolic compounds in crude extracts by various solvents decreased in the following order: 60% CH3OH>H2O>100% CH3OH>96% C2H5OH. The crude and purified tobacco extracts showed high antioxidant activity determined by ABTS, FRAP and DPPH assays. The total phenolic content and antioxidant activity of 60% crude methanolic extracts were close to the SPE purified and resinpurified tobacco extracts

Dansyl linked solid phase resins as an educational tool to teach the concepts of high throughput screening and prodrugs.

High throughput screening (HTS) and combinatorial chemistry, have been part of the process of drug design for nearly two decades. However, methods to teach their practical aspects to undergraduate students are scarce in the literature.1-3 The authors describe the synthesis and reactivity, under hydrolytic and transesterification conditions, of newly prepared fluorescent solid phase resins, envisaged to teach the concept of HTS, and prodrugs, to undergraduate students. Although the enzymatic methods did not perform well, the chemical hydrolysis, and the transesterification reaction, of these new solid phase resins, worked in very good yields, and produced very useful results. In relation to the experiment, the student’s learning experience, and feedback, were very positive.

Click chemistry-based enrichment strategy for tracing cellular fatty acid metabolism by LC-MS/MS

Fatty acids (FAs), which were initially recognized as energy sources and essential building blocks of biomembranes, serve as the precursors of important signaling molecules. Tracing FA metabolism is essential to understanding the biochemical activity and role of FAs in physiological and pathological events. Inspired by the advances in click chemistry for protein enrichment, we herein established a click chemistry-based enrichment (CCBE) strategy for tracing the cellular metabolism of eicosapentaenoic acid (EPA, 20:5 n-3) in neural cells. Terminal alkyne-labeled EPA (EPAA) used as a surrogate was incubated with N2a, mouse neuroblastoma cells, and alkyne-labeled metabolites (ALMs) were selectively captured by an azide-modified resin via a Cu(I)-catalyzed azide-alkyne cycloaddition reaction for enrichment. After removing unlabeled metabolites, ALMs containing a triazole moiety were cleaved from solid-phase resins and subjected to liquid chromatography mass spectrometry (LC-MS) analysis. The proposed CCBE strategy is highly selective for capturing and enriching alkyne-labeled metabolites from the complicated matrices. In addition, this method can overcome current detection limits by enhancing MS sensitivity of targets, improving the chromatographic separation of sn-position glycerophospholipid regioisomers, facilitating structural characterization of ALMs by a specific MS/MS fragmentation signature, and providing versatile fluorescence detection of ALMs for cellular distribution. This CCBE strategy might be expanded to trace the metabolism of other FAs, small molecules, or drugs.

Hydrophile-lipophile balance solid phase extraction of surface water organics: Fluorescent elution preference and overlooked fractions

Fluorescent dissolved organic matter (FDOM) in surface water has broad implications on water quality research and operations. Solid phase extraction (SPE) is the most widely used technique to extract FDOM. However, fluorescent elution preferences by common solvents and content of quantifiable chromophores in waste fraction remain largely unknown, both quantitatively and qualitatively. In this work, the preferential selection of various types of FDOM captured by and lost from SPE as characterized by the fluorescence excitation-emission matrix (EEM) were investigated. Three elution solvents (methanol, acetone, and dichloromethane) were adopted to elute the DOM that was enriched on a typical SPE sorbent. Results revealed that high polarity (methanol) and medium polarity (acetone) solvents eluted the highest variety and quantity of humic acid-like substances (Region V), while the low polarity (dichloromethane) elution solvent was more suitable for eluting tyrosine (Region I) and tryptophan (Region II). Compared to eluting only with methanol, sequential elution and recombination using the three aforementioned solvents demonstrated a significant increase in not only DOC recovery (by 7%), but fluorescence integral values and fluorescence characteristics covering collectively much larger fluorescence regions that more closely resembled raw water. For the first time, the fluorescence EEM of waste after loading the sample revealed a previously overlooked FDOM loss of 20%, caused by ineffective adsorption onto the solid phase resin. Substantial carbonaceous and nitrogenous FDOM were present in this fraction (the fluorescence intensity of aromatic protein in waste exceeds 20% of that in raw water), indicating possible underestimations of FDOM-related research in areas such as disinfection byproduct and toxicity work. The results of this study provide both a qualitative and quantitative characterization of the elution and lost products of SPE in capturing FDOM.

Solid-Phase Synthesis of s-Tetrazines.

An efficient synthesis of s-tetrazines by solid-phase methods is described. This synthesis route was compatible with different solid-phase resins and linkers and did not require metal catalysts or high temperatures. Monosubstituted tetrazines were routinely synthesized using thiol-promoted chemistry, using dichloromethane as a carbon source, while disubstituted unsymmetrical aryl or alkyl tetrazines were synthesized using readily available nitriles. This efficient approach enabled the synthesis of s-tetrazines in high yields (70-94%), eliminating the classical solution-phase problems of mixtures of symmetrical and unsymmetrical tetrazines, with only a single final purification step required, and paves the way to the rapid synthesis of s-tetrazines with various applications in bioorthogonal chemistry and beyond.

Solid-Phase Parallel Synthesis of Dual Histone Deacetylase-Cyclooxygenase Inhibitors.

Multi-target drugs (MTDs) are emerging alternatives to combination therapies. Since both histone deacetylases (HDACs) and cyclooxygenase-2 (COX-2) are known to be overexpressed in several cancer types, we herein report the design, synthesis, and biological evaluation of a library of dual HDAC-COX inhibitors. The designed compounds were synthesized via an efficient parallel synthesis approach using preloaded solid-phase resins. Biological in vitro assays demonstrated that several of the synthesized compounds possess pronounced inhibitory activities against HDAC and COX isoforms. The membrane permeability and inhibition of cellular HDAC activity of selected compounds were confirmed by whole-cell HDAC inhibition assays and immunoblot experiments. The most promising dual inhibitors, C3 and C4, evoked antiproliferative effects in the low micromolar concentration range and caused a significant increase in apoptotic cells. In contrast to previous reports, the simultaneous inhibition of HDAC and COX activity by dual HDAC-COX inhibitors or combination treatments with vorinostat and celecoxib did not result in additive or synergistic anticancer activities.

Co2+/PMS based sulfate-radical treatment for effective mineralization of spent ion exchange resin

Sulfate radical advance oxidation processes (SR-AOPs) have attracted a greater attention as a suitable alternative of the hydroxyl radical based advance oxidation process (HR-AOPs). In this study, for the first time we report liquid phase mineralization of nuclear grade cationic IRN-77 resin in Co2+/peroxymonosulfate (PMS) based SR-AOPs. After the dissolution of cationic IRN-77 resin, 30 volatile and 15 semi-volatile organic compounds were analyzed/detected using non-targeted GC-MS analysis. The optimal reaction parameters for the highest chemical oxygen demand (COD) removal (%) of IRN-77 resin were determined, and the initial pH, PMS dosage, and reaction temperature were found to be the most influential parameters for the resin degradation. We successfully achieved ∼90% COD removal (1000 mg/L; 1000 ppm) of dissolved spent resin for SR-AOPs by optimizing the reaction parameters as initial pH = 9, Co2+ = 4 mM (catalyst), PMS = 60 mM (as oxidant) at 60 °C temperature for 60 min reaction. The electron spin resonance spectroscopy (ESR) spectra confirmed the presence of SO4∙- and OH∙ as main reactive species in the Co2+/PMS resin system. In addition, Fourier transform infrared spectroscopy (FT-IR) analyses were used for structural characterization of solid and liquid phase resin samples. We believe that this work will offer a robust approach for the effective treatment of spent resin generated from nuclear industry.

Direct and Divergent Solid-Phase Synthesis of Azobenzene and Spiropyran Derivatives.

Here, we report a solid-phase approach to synthesize azobenzene and spiropyran derivatives. The divergent synthesis process requires no purification steps to obtain the desired product with a 28-55% yield, depending on the specific compound. For the spiropyran compounds, solid-phase resin cleavage is performed under mild conditions to minimize spiropyran ring opening. The solid-phase method enables the synthesis of a library of azobenzene and spiropyran derivatives without the need to develop purification strategies for each derivative.

Evaluation of Potential Anthropogenic Pollution of Gd Based on Determination of Rave Earth Elements in Tama-River Water by ICP-MS with Chelate Resin Solid-phase Extraction

Evaluation of Potential Anthropogenic Pollution of Gd Based on Determination of Rave Earth Elements in Tama-River Water by ICP-MS with Chelate Resin Solid-phase Extraction

Purification of poly-dA oligonucleotides and mRNA-protein fusions with dT25-OAS resin

Solid-phase resins functionalized with poly-deoxythymidine (dT) oligos facilitate purification of poly-adenylated molecules from solution through high affinity, high selectivity base-pairing interactions. These resins are commonly used to purify messenger RNA (mRNA) from complex biological mixtures as well as mRNA-protein fusion molecules for mRNA Display selections. Historically, dT-conjugated cellulose was the primary resin for poly-dA purification, but its scarcity has prompted the development of alternative resins, most notably dT-functionalized magnetic beads. In order to develop a cost-effective alternative to commercially available poly-dT resins for large-scale purifications of mRNA-protein fusions, we investigated the purification properties of dT25-conjugated Oligo Affinity Support resin (dT25-OAS) alongside poly-dT14 magnetic beads and dT25-cellulose. dT25-OAS was found to have the highest dA21 oligo binding capacity at 4 pmol/µg, followed by dT14-magnetic beads (1.1 pmol/µg) and dT25-cellulose (0.7 pmol/µg). To determine the resin specificity in the context of a complex biological mixture, we translated mRNA-protein fusions consisting of a radiolabeled Her2 affibody fused to its encoding mRNA. Commercial dT25-cellulose showed the highest mRNA-affibody purification specificity, followed by dT25-OAS and dT14-magnetic beads. Overall, dT25-OAS showed exceptionally high binding capacity and low background binding, making it an attractive alternative for large-scale mRNA purification and mRNA Display library enrichment.

Design and synthesis of N1,N8-diacetylspermidine analogues having a linker with desired functional groups.

The synthesis of new N1,N8-diacetylspermidine (DiAcSpd) analogues having a linker with desired functional groups in the methylene skeleton, which have been designed by theoretical calculations, is described. We have also achieved the preparation of DiAcSpd supported on solid-phase resins, which have the potential to be used for the evolution of ligands by exponential enrichment (SELEX).

Novel solid-phase strategy for the synthesis of ligand-targeted fluorescent-labelled chelating peptide conjugates as a theranostic tool for cancer.

In this article, we have successfully designed and demonstrated a novel continuous process for assembling targeting ligands, peptidic spacers, fluorescent tags and a chelating core for the attachment of cytotoxic molecules, radiotracers, nanomaterials in a standard Fmoc solid-phase peptide synthesis in high yield and purity. The differentially protected Fmoc-Lys-(Tfa)-OH plays a vital role in attaching fluorescent tags while growing the peptide chain in an uninterrupted manner. The methodology is versatile for solid-phase resins that are sensitive to mild and strong acidic conditions when acid-sensitive side chain amino protecting groups such as Trt (chlorotrityl), Mtt (4-methyltrityl), Mmt (4-methoxytrityl) are employed to synthesise the ligand targeted fluorescent tagged bioconjugates. Using this methodology, DUPA rhodamine B conjugate (DUPA = 2-[3-(1,3-dicarboxypropyl)ureido]pentanedioic acid), targeting prostate specific membrane antigen (PSMA) expressed on prostate, breast, bladder and brain cancers and pteroate rhodamine B, targeting folate receptor positive cancers such as ovarian, lung, endometrium as well as inflammatory diseases have been synthesized. In vitro studies using LNCaP (PSMA +ve), PC-3 (PSMA −ve, FR −ve) and CHO-β (FR +ve) cell lines and their respective competition experiments demonstrate the specificity of the newly synthesized bioconstructs for future application in fluorescent guided intra-operative imaging.

Automated concentration of [18F]fluoride into microliter volumes

Concentration of [18F]fluoride has been mentioned in literature, however, reports have lacked details about system designs, operation, and performance. Here, we describe in detail a compact, fast, fully-automated concentration system based on a micro-sized strong anion exchange cartridge. The concentration of radionuclides enables scaled-up microfluidic synthesis. Our system can also be used to provide highly concentrated [18F]fluoride with minimal water content. We demonstrate how the concentrator can produce varying concentrations of [18F]fluoride for the macroscale synthesis of N-boc-5-[18F]fluoroindole without an azeotropic drying process, while enabling high starting radioactivity. By appropriate choice of solid-phase resin, flow conditions, and eluent solution, we believe this approach can be extended beyond [18F]fluoride to other radionuclides.

Identification of Azadinium species and a new azaspiracid from Azadinium poporum in Puget Sound, Washington State, USA

The identification of a new suite of toxins, called azaspiracids (AZA), as the cause of human illnesses after the consumption of shellfish from the Irish west coast in 1995, resulted in interest in understanding the global distribution of these toxins and of species of the small dinoflagellate genus Azadinium, known to produce them. Clonal isolates of four species of Azadinium, A. poporum, A. cuneatum, A. obesum and A. dalianense were obtained from incubated sediment samples collected from Puget Sound, Washington State in 2016. These Azadinium species were identified using morphological characteristics confirmed by molecular phylogeny. Whereas AZA could not be detected in any strains of A. obesum, A. cuneatum and A. dalianense, all four strains of A. poporum produced a new azaspiracid toxin, based on LC–MS analysis, named AZA-59. The presence of AZA-59 was confirmed at low levels in situ using a solid phase resin deployed at several stations along the coastlines of Puget Sound. Using a combination of molecular methods for species detection and solid phase resin deployment to target shellfish monitoring of toxin at high-risk sites, the risk of azaspiracid shellfish poisoning can be minimized.

Onsite chelate resin solid-phase extraction of rare earth elements in natural water samples: its implication for studying past redox changes by inorganic geochemistry

Rare earth element (REE) patterns in natural water and geological samples provide information on previous changes in environmental conditions, such as redox changes and material cycles; however, quantitative analysis of REEs in these samples is complicated by the relatively low contents of REEs in such samples as well as mass interference from 135Ba16O and 137Ba16O in inductively coupled plasma mass spectrometry (ICP-MS) analyses. In this study, onsite solid-phase extraction and preconcentration methods for REEs using an iminobisacetic acid–ethylenediaminetriacetic acid chelate resin (Nobias Chelate PA1, Hitachi High-Tech Fielding) were adopted for the analyses. Standard reference materials (SPS-SW1 artificial surface water) and natural ground water and spring water samples were used to evaluate the methods. Using the chelate resin, background levels of REEs were found to be less than 0.3 ng L−1 and recovery rates (REEs, 1 ng L−1) were 97.9–106.7% for the artificial surface water. Ba contents were lower than the detection limit after extraction. Additionally, duplicate analyses were performed to check the reproducibility of the onsite extraction. The REE patterns in the natural water samples were in good agreement with those obtained using a previous method (the interference calibration method without solid-phase extraction). Therefore, onsite solid-phase extraction using the chelate resin was demonstrated to be a rapid and simple preparation technique for REE analyses.

Solid-phase extraction microfluidic devices for matrix removal in trace element assay of actinide materials

Advances in sample nebulization and injection technology have significantly reduced the volume of solution required for trace impurity analysis in plutonium and uranium materials. Correspondingly, we have designed and tested a novel chip-based microfluidic platform, containing a 100-µL or 20-µL solid-phase microextraction column, packed by centrifugation, which supports nuclear material mass and solution volume reductions of 90% or more compared to standard methods. Quantitative recovery of 28 trace elements in uranium was demonstrated using a UTEVA chromatographic resin column, and trace element recovery from thorium (a surrogate for plutonium) was similarly demonstrated using anion exchange resin AG MP-1. Of nine materials tested, compatibility of polyvinyl chloride (PVC), polypropylene (PP), and polytetrafluoroethylene (PTFE) chips with the strong nitric acid media was highest. The microcolumns can be incorporated into a variety of devices and systems, and can be loaded with other solid-phase resins for trace element assay in high-purity metals.

A simple isotopic labeling method to study cysteine oxidation in Alzheimer's disease: oxidized cysteine-selective dimethylation (OxcysDML).

Cysteine is widely involved in redox signaling pathways through a number of reversible and irreversible modifications. Reversible modifications (e.g., S-glutathionylation, S-nitrosylation, disulfide bonds, and sulfenic acid) are used to protect proteins from oxidative attack and maintain cellular homeostasis, while irreversible oxidations (e.g., sulfinic acid and sulfonic acid) serve as hallmarks of oxidative stress. Proteomic analysis of cysteine-enriched peptides coupled with reduction of oxidized thiols can be used to measure the oxidation states of cysteine, which is helpful for elucidating the role that oxidative stress plays in biology and disease. As an extension of our previously reported cysDML method, we have developed oxidized cysteine-selective dimethylation (OxcysDML), to investigate the site-specific total oxidation of cysteine residues in biologically relevant samples. OxcysDML employs (1) blocking of free thiols by a cysteine-reactive reagent, (2) enrichment of peptides containing reversibly oxidized cysteine by a solid phase resin, and (3) isotopic labeling of peptide amino groups to quantify cysteine modifications arising from different biological conditions. On-resin enrichment and labeling minimizes sample handing time and improves efficiency in comparison with other redox proteomic methods. OxcysDML is also inexpensive and flexible, as it can accommodate the exploration of various cysteine modifications. Here, we applied the method to liver tissues from a late-stage Alzheimer's disease (AD) mouse model and wild-type (WT) controls. Because we have previously characterized this proteome using the cysDML approach, we are able here to probe deeper into the redox status of cysteine in AD. OxcysDML identified 1129 cysteine sites (from 527 proteins), among which 828 cysteine sites underwent oxidative modifications. Nineteen oxidized cysteine sites had significant alteration levels in AD and represent proteins involved in metabolic processes. Overall, we have demonstrated OxcysDML as a simple, rapid, robust, and inexpensive redox proteomic approach that is useful for gaining deeper insight into the proteome of AD.

Postsynthetic modification of peptoids via the Suzuki-Miyaura cross-coupling reaction.

We developed a new method for modifying the side chains of peptoids on a solid phase resin, employing the palladium-catalyzed Suzuki-Miyaura cross-coupling reaction. Optimized conditions using Pd(PPh3 )4 and K2 CO3 in the presence of Buchwald's SPhos ligand provided a high conversion in the coupling reaction. The usefulness of this method was demonstrated by synthesis of a two pyrene-conjugated peptoid helix, which exhibited an interesting excimer formation.

Determination of three kinds of banned drugs in milk powder by hybrid solid-phase extraction purification combined with gas chromatography and mass spectrometry.

A gradient clean-up method for the quantification of five kinds of banned drugs (two hormones, two sedatives, and one chloramphenicol) in milk powder was developed. We used the combination of solid-phase extraction purification with gas chromatography and mass spectrometry. Milk powder was initially hydrolyzed by β-glucuronidase/arylsulfatase, and then the hydrolyzed solution was concentrated and purified using a C8 and cation resin solid-phase extraction column. To isolate hormones and chloramphenicol drugs, products from the previous step were diluted with methanol and further purified using a silica and diatomite solid-phase extraction column. After derivatization, the drugs were analyzed by gas chromatography with mass spectrometry, and the hydrolyzed solution was diluted with 5% ammoniated methanol to purify sedatives before gas chromatography with mass spectrometry analysis. Results showed that after adding the banned drugs at concentrations of 0.3-10.0 μg/kg, the average recovery range was 78.2-97.3% with relative standard deviations of 5.3-12.5%. The limit of quantification of the banned drugs (S/N ≥ 10) was 0.3-5.0 μg/kg, whereas the limit of detection (S/N ≥ 3) was 0.1-2.0 μg/kg. The solid-phase extraction gradient purification system was simple, rapid, and accurate, and could satisfy the detection requirements of hormone, sedatives, and chloramphenicol drugs when used together with gas chromatography and mass spectrometry.

Simultaneous analysis of apolar phytohormones and 1-aminocyclopropan-1-carboxylic acid by high performance liquid chromatography/electrospray negative ion tandem mass spectrometry via 9-fluorenylmethoxycarbonyl chloride derivatization

A strategy to detect and quantify the polar ethylene precursor 1-aminocyclopropan-1-carboxylic acid (ACC) along with the more apolar phytohormones abscisic acid (ABA), indole-3-acetic acid (IAA), jasmonic acid (JA), jasmonic acid-isoleucine conjugate (JA-Ile), 12-oxo-phytodienoic acid (OPDA), trans-zeatin, and trans-zeatin 9-riboside using a single extraction is presented. Solid phase resins commonly employed for extraction of phytohormones do not allow the recovery of ACC. We circumvent this problem by attaching an apolar group to ACC via derivatization with the amino group specific reagent 9-fluorenylmethoxycarbonyl chloride (Fmoc-Cl). Derivatization in the methanolic crude extract does not modify other phytohormones. The derivatized ACC could be purified and detected together with the more apolar phytohormones using common solid phase extraction resins and reverse phase HPLC/electrospray negative ion tandem mass spectrometry. The limit of detection was in the low nanomolar range for all phytohormones, a sensitivity sufficient to accurately determine the phytohormone levels from less than 50mg (fresh weight) of Arabidopsis thaliana and Nicotiana benthamiana tissues. Comparison with previously published phytohormone levels and the reported changes in phytohormone levels after stress treatments confirmed the accuracy of the method.