Soil Organic Matter Formation Research Articles

Simulated nitrogen deposition and precipitation events alter microbial carbon cycling during early stages of litter decomposition

Abstract Plant litter decomposition is a major nutrient input to terrestrial ecosystems that is primarily driven by microorganisms. Litter quality is considered a key drive of decomposition; however, human-induced global disturbance like nitrogen deposition and increasing extreme precipitation events will shift nutrient availability during litter decomposition. Little is known about how shifting nutrient availability will impact dissolved organic matter concentrations and microbially driven carbon cycling that are critical to soil organic matter formation. This study investigated the effect of simulated nitrogen deposition and repeated precipitation events on microbially-driven carbon flow during short-term litter decomposition using a ‘common garden’ experiment with microcosms containing sand and blue grama grass litter inoculated with different microbial communities. Overall, nitrogen deposition decoupled respiration and dissolved organic carbon (DOC) by increasing respiration and not affecting DOC concentrations. Moreover, nitrogen deposition had no effect on microbial carbon use efficiency (CUE). Repeated simulated precipitation events significantly increased DOC concentrations, decreased microbial CUE, increased the microbial metabolic quotient (qCO2), and altered microbial composition and diversity. These findings highlight the complex interactions and responses of surface litter decomposers to shifting nutrient availability and contradicts previous findings that nitrogen deposition will increase soil carbon sequestration from a larger supply of DOC and reduced respiration.

Soil moisture determines the consistency of organic matter decomposition in field and lab test patterns

Litter decomposition serves as the primary process for soil organic matter formation and renewal. However, few studies have been conducted to validate field large-scale litter decomposition patterns. In this study, cotton strips and Solanum nigrum were used to explore the decomposition differences between standardized litter and conventional litter, along with the release of heavy metal Cadmium (Cd). The indoor characteristics of organic matter decomposition were further verified. After 6 months of Cd pretreatment, litter was placed on the surface of soil collected from 15 sites across the China for 3 months of lab tests. The results indicated that the decomposition rates of both litter types were regulated by soil moisture and generally showed a trend of deceleration from east to west, consistent with the field decomposition pattern. In addition, the mass loss of cotton strip was significantly lower than S. nigrum due to the higher Cd concentration. With the decomposition process, both litter types showed a decreasing trend in Cd concentration, especially the cotton strip. Interestingly, our study found soil factors had the highest relative influence on decomposition. A higher soil microbial moisture use efficiency in the mid-latitude region during litter decomposition may be attributed to the adaptability of microorganisms. Our research demonstrated the consistency of lab test patterns with the field experiments, emphasizing the distinctions between standardized and conventional litter. This study not only revealed the influence mechanism of soil moisture and Cd on litter decomposition rate but also emphasized the important role of microorganisms in the litter decomposition process, which provided a new perspective for a deeper understanding of the ecosystem carbon cycle and heavy metal pollution.

Labile carbon release from plant litter and its effect on soil organic matter formation in a subtropical forest

Labile carbon release from plant litter and its effect on soil organic matter formation in a subtropical forest

Interaction between peptide and solid lignin suggest mechanisms of abiotic covalent bond formation

The mechanisms behind the formation of soil organic matter (SOM) and associated nitrogen immobilization remain partially elusive, while ongoing research continues to shed light on carbon and nitrogen sequestration in the environment. Studies show that quinone-like structures within alkali-soluble humic extracts of SOM can bond covalently with nitrogen-containing molecules derived from proteinaceous organic matter. However, direct molecular evidence for this chemical bonding with lignin in the solid form and non-solvent-extracted SOM is lacking. Using gel-state 1H-15N heteronuclear single quantum coherence (HSQC) high-resolution magic angle spinning (HRMAS) nuclear magnetic resonance (NMR) spectroscopy, we demonstrate that a 15N-labeled peptide (glycine-glycine-glycine-arginine, GGGR), can covalently bind to solid, untreated, brown rotted wood as well as 1,2-naphthoquinone, a quinone-model molecule typically found in degraded lignin. The new peaks in both reactions represent a change in the environment surrounding the N-functional groups. Interaction of the 15N-labeled peptide with the model quinone produced NMR cross peaks that are similar to those of the solid lignin. This suggests that the quinone-like structures are the most likely functional groups to form covalent bonds with peptides in the degraded lignin. Both Michael addition and Schiff base formation is proposed when the peptide GGGR interacts with white oak lignin and 1,2-naphthoquinone. These processes are of considerable importance to N incorporation into SOM and offer insights into how proteinaceous molecules could potentially be preserved and sequestered through covalent bond formation.

Soil organic matter persistence in hyperhumic colluvial soils caused by palaeofires, root inputs and mineral binding

Understanding the formation of long-term persistent soil organic matter (SOM) is key to optimizing soil management and predicting the response of the terrestrial organic carbon (OC) pool to climate change, yet our knowledge of the soil-type dependent weight of different stabilization pathways (e.g., recalcitrance and mineral binding) is fragmentary. Owing to their stratigraphy, the exceptionally SOM-rich (up to 2 m of mineral soil with >5% OC) colluvial slope deposits of Atlantic Europe (Haplic Umbrisol [colluvic/hyperhumic]) are archives of palaeo-environmental conditions including SOM formation pathways. The objective of this study was to determine how the different drivers of persistent SOM formation influenced the formation of these organic-rich soils. For this purpose, we use Holocene (∼9000 yrs) molecular composition records obtained from pyrolysis-GC–MS (Py-GC–MS) and thermally assisted hydrolysis and methylation (THM-GC–MS). The results emphasize three pathways to stability (i.e., persistence on millennial timescales): 1) palaeofires that generated recalcitrant pyrogenic SOM, 2) release of root-derived aliphatic macromolecules (suberin-like SOM), and 3) formation of microbial necromass. Pathways 1 and 2 are controlled by land use: Pathway 1 was relatively important under intense anthropogenic fire regimes and pyrophytic shrubland expansion; Pathway 2 was stimulated during early forest phases and under pasture conditions, when past societies focused vegetation management on grazing instead of fire; Pathway 3 was controlled by binding with aluminium-dominated mineral phases. However, we found indications that Pathway 2 (suberin input and preservation) relied partially on sorptive preservation as well. Aided by structured equation modeling (SEM), we show that the formation of persistent SOM pools was driven by balanced weights of i) microbial vs. plant-derived SOM and ii) intrinsic chemical properties of SOM (recalcitrance continuum) vs. mineral binding/occlusion, which varied in keeping with interactions between past land use, topography and vegetation. These findings are inconsistent with the prevalent paradigm of persistent SOM formation by sorptive/occlusive preservation of microbial necromass alone.

Isotopic analysis (δ13C and δ2H) of lignin methoxy groups in forest soils to identify and quantify lignin sources

The relative apportion of above and below ground carbon sources is known to be an important factor in soil organic matter formation. Although lignin is the most abundant aromatic plant material in the terrestrial biosphere, our understanding of lignin source contributions to soil organic matter (SOM) is limited due to the complex molecular structure and analysis of lignin. In this study, we novelly apply the dual isotopic analysis (δ13C and δ2H values) of lignin methoxy groups (LMeO) with the Bayesian mixing model, MixSIAR, to apportion lignin sources in two contrasting soil types, a podzol and a stagnosol. Results of the isotopic analysis of LMeO demonstrate the ability of δ2H LMeO values to discriminate between above and below ground lignin sources, while δ13C LMeO values discriminated between photosynthesising and non-photosynthesising tissues. In the stagnosol subsurface horizons, a decreasing proportion of the leaf litter lignin was observed with increasing organic matter degradation, cumulating in the Ah horizon being dominated by lignin from roots. The podzol sites indicated a similar reduction in leaf litter lignin with an increase in organic matter degradation and depth. However, the Ah horizon was shown to accumulate lignin from the above ground woody material. Furthermore, given the significant abundance of LMeO groups in the terrestrial biosphere and the extremely depleted δ13C LMeO values in leaf litter, we employed a mass balance approach to determine the extent in which the 13C bulk enrichment generally associated with isotopic fractionation during organic matter decomposition can be attributed to the shift in lignin sources. Analysis reveals that 14 % and 11 % of bulk 13C enrichment can be attributed to the transition in LMeO sources from leaf litter to roots in the stagnosol and podzol, respectively. Thus, models relying on 13C enrichment with depth as an indicator of carbon turnover may be partially overestimating rates.

Long-term straw return promotes accumulation of stable soil dissolved organic matter by driving molecular-level activity and diversity

Agricultural management practices play pivotal roles in affecting soil organic matter formation pathways, particularly through changes in soil dissolved organic matter (DOM). The potential effects of long-term straw return on the molecular-level activity and transformations of DOM were investigated in this study. Over 9 years, the soil DOM from straw return had high stability, unsaturation degree, oxidability, and strong aromaticity. The relative abundance of biologically refractory DOM components (i.e., lignin-, condensed aromatic-, and tannin-like formulas) increased by 4 %-33 %, whereas the relative abundance of biodegradable DOM components (i.e., lipids and protein/amino sugar-like formulas) decreased by 15 %-23 % under straw return. Furthermore, the positive effects of straw return on the intergroup transformations of biologically refractory compounds favored the persistence of recalcitrant organic matter in the soil. Importantly, intragroup transformations of recalcitrant-active molecules and biologically refractory compounds were critical pathways for stable DOM accumulation under straw return, and these were mainly driven by thermodynamically limited processes. Thus, our results indicated that long-term straw return promoted the persistence of stabilized soil DOM by driving molecular-level activity and diversity.

Living and decaying roots as regulators of soil aggregation and organic matter formation—from the rhizosphere to the detritusphere

In dryland ecosystems, typically characterized by sparse vegetation and nutrient scarcity, pioneer plants exert a critical role in the build-up of soil carbon (C). Continuous root-derived C inputs, including rhizodeposition and structural root litter, create hotspots of increased microbial activity and nutrient availability where biogeochemical processes, such as soil aggregation and the accumulation and stabilization of organic matter (OM), are promoted. Our study aims to disentangle the effects of root C inputs on soil aggregate formation, microbial community structures, and on the fate of OM—both before and after plant death, i.e., during the transition from rhizosphere to detritusphere. This was realized in a two-phase incubation approach, tracing the natural and undisturbed transition from growth to subsequent decomposition of a pioneer plant-root system (Helenium aromaticum) in a semi-arid topsoil and subsoil. We quantified water-stable aggregates, investigated the fate and composition of OM separated into particulate and mineral-associated OM fractions (POM and MAOM), and observed successional changes in the root-associated microbiome. Our results underscore the significance of roots as vectors for macroaggregation within the rhizosphere in both topsoil and subsoil, associated with a particularly strong increase in fungal abundance in the subsoil. In topsoil, we identified root legacy effects in the detritusphere, as root-induced macroaggregation persisted after plant death, a phenomenon not observed in subsoil. These root legacy effects were accompanied by a clear succession towards gram + bacteria, which appeared to outcompete fungi during root decomposition. The increased availability of decaying litter surfaces further facilitated the protection of particulate OM via the occlusion into aggregates. Overall, to gain a holistic understanding of plant-microbe-soil interactions, we emphasize the need for more studies that span over the full temporal dimension from living to dying plants in intact soil systems.

Bridging 20 Years of Soil Organic Matter Frameworks: Empirical Support, Model Representation, and Next Steps

AbstractIn the past few decades, there has been an evolution in our understanding of soil organic matter (SOM) dynamics from one of inherent biochemical recalcitrance to one deriving from plant‐microbe‐mineral interactions. This shift in understanding has been driven, in part, by influential conceptual frameworks which put forth hypotheses about SOM dynamics. Here, we summarize several focal conceptual frameworks and derive from them six controls related to SOM formation, (de)stabilization, and loss. These include: (a) physical inaccessibility; (b) organo‐mineral and ‐metal stabilization; (c) biodegradability of plant inputs; (d) abiotic environmental factors; (e) biochemical reactivity and diversity; and (f) microbial physiology and morphology. We then review the empirical evidence for these controls, their model representation, and outstanding knowledge gaps. We find relatively strong empirical support and model representation of abiotic environmental factors but disparities between data and models for biochemical reactivity and diversity, organo‐mineral and ‐metal stabilization, and biodegradability of plant inputs, particularly with respect to SOM destabilization for the latter two controls. More empirical research on physical inaccessibility and microbial physiology and morphology is needed to deepen our understanding of these critical SOM controls and improve their model representation. The SOM controls are highly interactive and also present some inconsistencies which may be reconciled by considering methodological limitations or temporal and spatial variation. Future conceptual frameworks must simultaneously refine our understanding of these six SOM controls at various spatial and temporal scales and within a hierarchical structure, while incorporating emerging insights. This will advance our ability to accurately predict SOM dynamics.

Microbial central carbon metabolism in a tidal freshwater marsh and an upland mixed conifer soil under oxic and anoxic conditions.

The central carbon (C) metabolic network is responsible for most of the production of energy and biosynthesis in microorganisms and is therefore key to a mechanistic understanding of microbial life in soil communities. Many upland soil communities have shown a relatively high C flux through the pentose phosphate (PP) or the Entner-Doudoroff (ED) pathway, thought to be related to oxidative damage control. We tested the hypothesis that the metabolic organization of the central C metabolic network differed between two ecosystems, an anoxic marsh soil and oxic upland soil, and would be affected by altering oxygen concentrations. We expected there to be high PP/ED pathway activity under high oxygen concentrations and in oxic soils and low PP/ED activity in reduced oxygen concentrations and in marsh soil. Although we found high PP/ED activity in the upland soil and low activity in the marsh soil, lowering the oxygen concentration for the upland soil did not reduce the relative PP/ED pathway activity as hypothesized, nor did increasing the oxygen concentration in the marsh soil increase the PP/ED pathway activity. We speculate that the high PP/ED activity in the upland soil, even when exposed to low oxygen concentrations, was related to a high demand for NADPH for biosynthesis, thus reflecting higher microbial growth rates in C-rich soils than in C-poor sediments. Further studies are needed to explain the observed metabolic diversity among soil ecosystems and determine whether it is related to microbial growth rates.IMPORTANCEWe observed that the organization of the central carbon (C) metabolic processes differed between oxic and anoxic soil. However, we also found that the pentose phosphate pathway/Entner-Doudoroff (PP/ED) pathway activity remained high after reducing the oxygen concentration for the upland soil and did not increase in response to an increase in oxygen concentration in the marsh soil. These observations contradicted the hypothesis that oxidative stress is a main driver for high PP/ED activity in soil communities. We suggest that the high PP/ED activity and NADPH production reflect higher anabolic activities and growth rates in the upland soil compared to the anaerobic marsh soil. A greater understanding of the molecular and biochemical processes in soil communities is needed to develop a mechanistic perspective on microbial activities and their relationship to soil C and nutrient cycling. Such an increased mechanistic perspective is ecologically relevant, given that the central carbon metabolic network is intimately tied to the energy metabolism of microbes, the efficiency of new microbial biomass production, and soil organic matter formation.

The Use of Spectroscopic Methods to Study Organic Matter in Virgin and Arable Soils: A Scoping Review

The use of modern spectroscopic methods of analysis, which provide extensive information on the chemical nature of substances, significantly expands our understanding of the molecular composition and properties of soil organic matter (SOM) and its transformation and stabilization processes in various ecosystems and geochemical conditions. The aim of this review is to identify and analyze studies related to the application of nuclear magnetic resonance (NMR) and electron paramagnetic resonance (EPR) spectroscopy techniques to study the molecular composition and transformation of organic matter in virgin and arable soils. This article is mainly based on three research questions: (1) Which NMR spectroscopy techniques are used to study SOM, and what are their disadvantages and advantages? (2) How is the NMR spectroscopy technique used to study the molecular structure of different pools of SOM? (3) How is ESR spectroscopy used in SOM chemistry, and what are its advantages and limitations? Relevant studies published between 1996 and 2024 were searched in four databases: eLIBRARY, MDPI, ScienceDirect and Springer. We excluded non-English-language articles, review articles, non-peer-reviewed articles and other non-article publications, as well as publications that were not available according to the search protocols. Exclusion criteria for articles were studies that used NMR and EPR techniques to study non-SOM and where these techniques were not the primary methods. Our scoping review found that both solid-state and solution-state NMR spectroscopy are commonly used to study the structure of soil organic matter (SOM). Solution-phase NMR is particularly useful for studying soluble SOM components of a low molecular weight, whereas solid-phase NMR offers advantages such as higher 13C atom concentration for stronger signals and faster analysis time. However, solution-phase NMR has limitations including sample insolubility, potential signal aggregation and reduced sensitivity and resolution. Solid-state NMR is better at detecting non-protonated carbon atoms and identifying heterogeneous regions within structures. EPR spectroscopy, on the other hand, offers significant advantages in experimental biochemistry due to its high sensitivity and ability to provide detailed information about substances containing free radicals (FRs), aiding in the assessment of their reactivity and transformations. Understanding the FR structure in biopolymers can help to study the formation and transformation of SOM. The integration of two- and three-dimensional NMR spectroscopy with other analytical methods, such as chromatography, mass spectrometry, etc., provides a more comprehensive approach to deciphering the complex composition of SOM than one-dimensional techniques alone.

No-tillage farming for two decades increases plant- and microbial-biomolecules in the topsoil rather than soil profile in temperate agroecosystem

The impact of conservation tillage on the composition, stability, and origin (plant- or microbial-derived) of soil organic matter (SOM) within soil profiles remains unclear. In this study, we characterized the impact of different tillage practices on the molecular composition and status of SOM. These tillage practices included conventional tillage (CT) and conservation tillage such as rotary tillage (RT) and no-tillage (NT). Our investigation spanned a two-decade period within a temperate agroecosystem. Soil samples were collected down to a 30 cm profile, and four biomarkers, namely free lipids, lignin phenols, neutral sugars, and amino sugars, in conjunction with 13C NMR techniques were used to quantify SOM characteristics. The results revealed that conservation tillage (especially NT) led to improvements in both the quantity and composition of SOM when compared to CT in the topsoil (0–5 cm), but not in deeper layers (5–30 cm). More precisely, the NT topsoil, as opposed to CT, exhibited enhancements in two categories: (1) an increase in plant-derived compounds such as long-chain lipids (≥ C20) and steroids by 51%, lignin phenols by 106%, and plant-derived neutral sugars by 61%, and (2) an augmentation in microbial-derived biomolecules, which includes microbial-derived neutral sugars by 49% and microbial necromass carbon (MNC) by 94%. Furthermore, NT, relative to CT, increased the contribution of MNC to soil organic carbon in topsoil (up to 64%, mainly fungal necromass). This highlighted the predominant role of microbial-derived biomolecules in SOM formation. Similarly, RT treatments enhanced the microbial-derived neutral sugars by 18%, plant-derived neutral sugars by 14%, and lignin phenols by 43% relative to CT in the topsoil. Collectively, our study suggests that NT practice could be considered an effective strategy for enhancing SOM accumulation and persistence by fostering the accrual of plant- and microbial-derived biomolecules in the topsoil.

Reparameterizing Litter Decomposition Using a Simplified Monte Carlo Method Improves Litter Decay Simulated by a Microbial Model and Alters Bioenergy Soil Carbon Estimates

AbstractLitter decomposition determines soil organic matter (SOM) formation and plant‐available nutrient cycles. Therefore, accurate model representation of litter decomposition is critical to improving soil carbon (C) projections of bioenergy feedstocks. Soil C models that simulate microbial physiology (i.e., microbial models) are new to bioenergy agriculture, and their parameterization is often based on small datasets or manual calibration to reach benchmarks. Here, we reparameterized litter decomposition in a microbial soil C model (CORPSE ‐ Carbon, Organisms, Rhizosphere, and Protection in the Soil Environment) using the continental‐scale Long‐term Inter‐site Decomposition Experiment Team (LIDET) dataset which documents decomposition across a range of litter qualities over a decade. We conducted a simplified Monte Carlo simulation that constrained parameter values to reduce computational costs. The LIDET‐derived parameters improved modeled C and nitrogen (N) remaining, decomposition rates, and litter mean residence times as compared to Baseline parameters. We applied the LIDET litter decomposition parameters to a microbial bioenergy model (Fixation and Uptake of Nitrogen – Bioenergy Carbon, Rhizosphere, Organisms, and Protection) to examine soil C estimates generated by Baseline and LIDET parameters. LIDET parameters increased estimated soil C in bioenergy feedstocks, with even greater increases under elevated plant inputs (i.e., by increasing residue, N fertilization). This was due to the integrated effects of plant litter quantity, quality, and agricultural practices (tillage, fertilization). Collectively, we developed a simple framework for using large‐scale datasets to inform the parameterization of microbial models that impacts projections of soil C for bioenergy feedstocks.

Carbon sequestration in a bamboo plantation: a case study in a Mediterranean area

In the Mediterranean region, despite bamboo being an alien species that can seriously alter plant and animal biocoenosis, the area occupied by bamboo plantations continues to increase, especially for the purpose to sequester carbon (C). However, the C dynamics in the soil–plant system when bamboo is grown outside its native area are poorly understood. Here we investigated the C mitigation potential of the fast-growing Moso bamboo (Phyllostachys edulis) introduced in Italy for climate-change mitigation. We analyzed aboveground (AGB) and belowground (as root/shoot ratio) biomass, litter and soil organic C (SOC) at 0–15- and 15–30-cm depths in a 4-year-old bamboo plantation in comparison with the former annual cropland on which the bamboo was established. To have an idea of the maximum C stored at an ecosystem level, a natural forest adjacent the two sites was also considered. In the plantation, C accumulation as AGB was stimulated, with 14.8 ± 3.1 Mg C ha–1 stored in 3 years; because thinning was done to remove culms from the first year, the mean sequestration rate was 4.9 Mg C ha–1 a–1. The sequestration rates were high but comparable to other fast-growing tree species in Italy (e.g., Pinus nigra). SOC was significantly higher in the bamboo plantation than in the cropland only at the 0–15 cm depth, but SOC stock did not differ. Possibly 4 years were not enough time for a clear increase in SOC, or the high nutrient uptake by bamboos might have depleted the soil nutrients, thus inhibiting the soil organic matter formation by bacteria. In comparison, the natural forest had significantly higher C levels in all the pools. For C dynamics at an ecosystem level, the bamboo plantation on the former annual cropland led to substantial C removal from the atmosphere (about 12 Mg C ha–1 a–1). However, despite the promising C sequestration rates by bamboo, its introduction should be carefully considered due to potential ecological problems caused by this species in overexploited environments such as the Mediterranean area.

Wetlands harbor lactic acid-driven chain elongators.

Wetlands are globally significant carbon cycling hotspots that both sequester large amounts of CO2 as soil carbon as well as emit a third of all CH4 globally. Their outsized role in the global carbon cycle makes it critical to understand microbial processes contributing to carbon breakdown and storage in these ecosystems. Here, we confirm the presence of chain-elongating organisms in freshwater wetland soils. These organisms take small carbon compounds formed during the breakdown of biomass and turn them into larger compounds (six to eight carbon organic acids) that may potentially contribute to the formation of soil organic matter and long-term carbon storage. Moreover, we find that these chain-elongating organisms may be widely distributed in wetlands globally. Future work should identify these organisms' contribution to carbon cycling in wetlands and the potential role of the products they form in carbon sequestration in wetlands.

The ability of soils to aggregate, more than the state of aggregation, promotes protected soil organic matter formation

Efforts to increase soil organic carbon (SOC) are pursued as a viable climate change mitigation strategy. Boosting SOC stocks requires increasing plant carbon (C) inputs and promoting their persistence in SOC. In well aerated mineral soils, water soluble inputs are expected to stabilize through chemical binding to minerals, forming mineral-associated organic carbon (MAOC) before or after microbial transformation, while structural inputs are expected to stabilize as particulate organic carbon (POC) via protection in soil aggregates. Although ample research is centered on the effects of soil aggregation, its disturbance (e.g., tillage), and microbial processing on SOC cycling, we still lack mechanistic understanding of how plant C input type (i.e., soluble versus structural) and disturbance (i.e., aggregate disruption) independently and in interaction affect POC and MAOC formation and stabilization in soils with inherently different degrees of aggregation.To this end, using 13C enriched structural and soluble plant inputs, we traced SOC formation and stabilization in a lab incubation experiment in soils with differing levels of aggregation, and capacity to form aggregates after disturbance. Our results showed that soluble plant inputs contributed substantially to MAOC and that higher formation and persistence of MAOC occurred in the highly aggregated soil. Moreover, the highly aggregated soil retained more soluble inputs stabilized as MAOC when disturbed. Disturbance in this fine textured, organic carbon rich soil stimulated regeneration of aggregates around structural plant inputs leading to greater persistence of aggregate-occluded POC. Soluble plant inputs, specifically, as well as structural plant inputs in the highly aggregated disturbed soil, compensated for SOC lost due to disturbance alone.Overall, this study provides mechanistic evidence suggesting that management strategies for SOC accrual should consider soil type, aggregation potential, and plant attributes to inform decisions surrounding tillage frequency and cropping regimes. Our mechanistic findings require testing. If confirmed in the field, they would suggest that no disturbance in tandem with high structural plant C inputs would benefit most SOC accrual in systems with soils that have little capacity to form organo-mineral complexes, including large aggregates. On the contrary, with sustained plant inputs, occasional disturbance in systems with soils that have a high capacity to form organo-mineral complexes can promote both POC and MAOC formation and stabilization.

Effects of occurrence form of soil organic matter on the Atterberg limits and thermal conductivity of clays

Abstract Because of the interfacial interactions between mineral soil particles and soil organic matter (SOM), SOM occurs in various forms in the soil, and the mineral-associated and particulate forms are fundamental. Many recent studies have concentrated on the effects of SOM content and type on the geotechnical behavior of soil. However, the influence of SOM occurrence forms is not well understood, nor is there a scientific classification standard for SOM in geotechnical engineering. The main objectives of this study were to explore the effects of SOM occurrence forms on a few physical properties of clays to develop an engineering classification standard of SOM. First, this paper reviews the interfacial interaction mechanism, factors that influence the relation between mineral soil particles and SOM, and the classification method of SOM in soil science. Three predominant clays (montmorillonite, illite, and kaolinite) were then used as the matrix, and three groups of artificial soil samples with different SOM contents (wu ranging from 0 to 50% by weight) were prepared by adding peat. A chemical extraction method was used to determine the amount of different forms of SOM. Moreover, the Atterberg limits wL (wp) and thermal conductivity λ of artificial soil samples were tested. Based on the experimental results, the relationship between the form of SOM and these physical parameters was established. The experimental results show that the wL (wp) vs wu, and λ vs wu fitted curves were not monotonic but piecewise linear and could be divided into two straight lines with different slopes; wu corresponded to the inflection point of wL (wp) vs wu, and λ vs wu curves were closer to the threshold value wu,2. Finally, a simple engineering classification method of SOM is proposed.

Soil carbon determination for long‐term monitoring revisited using thermo‐gravimetric analysis

AbstractSoils and the vadose zone are the major terrestrial repository of carbon (C) in the form of soil organic matter (SOM), more resistant black carbon (BC), and inorganic carbonate. Differentiating between these pools is important for assessing vulnerability to degradation and changes in the C cycle affecting soil health and climate regulation. Major monitoring programs from field to continent are now being undertaken to track changes in soil carbon (SC). Inexpensive, robust measures that can differentiate small changes in the C pools in a single measurement are highly desirable for long‐term monitoring. In this study, we assess the accuracy and precision of thermo‐gravimetric analysis (TGA) using organic matter standards, clay minerals, and soils from a national data set. We investigate the use of TGA to routinely differentiate between C pools, something no single measurement has yet achieved. Based on the kinetic nature of thermal oxidation of SC combined with the different thermodynamic stabilities of the molecules, we designed a new method to quantify the inorganic and organic SC and further separate the organic biogeochemically active SOM (as loss on ignition, LOI) from the resistant BC in soils. We analyze the TGA spectrums of a national soil monitoring data set (n = 456) and measure total carbon (TC) using thermal oxidation and also demonstrate a TC/LOI relationship of 0.55 for soils ranging from mineral soils to peat for the United Kingdom consistent with previous monitoring campaigns.

Quantifying apparent and real priming effects based on inverse labelling

Organic inputs to soils can accelerate soil organic matter (SOM) decomposition via so-called priming effects, but at the same time microbial biomass turnover can be accelerated – that will be termed as apparent priming effect. However, only a few studies have been set up to quantify the contribution of extra CO2 production from apparent priming. Here, we labeled the microbial biomass by 14C-glucose in pre-incubation and then added labile carbon (C; 12C or 14C glucose) and nitrogen (N; NH4+) in soil and incubated over 120 days to investigate the contribution of apparent priming to total SOM priming. After 120 days of pre-incubation, 48 % of added glucose was released as CO2, and 34 % of added glucose was recovered in microbial biomass. After glucose addition, microbial biomass and salt extractable organic C were similar between glucose and water addition. However, glucose addition increased the contribution of 14C-glucose to microbial biomass by 2.5-folds and to CO2 by 10-folds. This increased contribution of 14C-glucose indicated accelerated microbial biomass turnover by labile C. Furthermore, 10 and 47 μg C g−1 of previously added and incorporated into microbial biomass 14C and 12C were replaced by new 14C, which contributed to 10 % and 33 % of primed CO2 emissions, respectively. On the contrary, N addition reduced previously added 14C in both microbial biomass pool and released CO2. This may reflect that the faster microbial turnover contributes to microbial necromass and further to stable SOM formation. Similar total apparent priming (∼1.5 μg C g−1 in 120 days, mainly in the first 20 days) was observed after glucose and N addition, which contributed around 1–4 % of total priming. Unlike after glucose and N additions, the 14C released as CO2 (8 % of the remaining previously added 14C-glucose) after water addition was mainly derived from reutilization of microbial necromass. This was supported by the absence of changes in either the 14C or total C in microbial biomass. Overall, the turnover of the microbial biomass pool – the apparent priming – should not be ignored, since microbial biomass acts not only as a major determinant of SOM turnover but also as a C pool.

Aligning theoretical and empirical representations of soil carbon-to-nitrogen stoichiometry with process-based terrestrial biogeochemistry models

Soil carbon-nitrogen (C:N) stoichiometry acts as a control over decomposition and soil organic matter formation and loss, making it a key soil property for understanding ecosystem dynamics and projected ecosystems responses to global environmental change. However, the controls of soil C:N and how they respond to increasing pressures from global change agents are not fully understood. The “foundational” controls on soil C:N, namely plant and microbial C:N, have been used to predict soil C:N, but fail to accurately simulate all ecosystems and may be insufficient for predictions under global environmental change. We present an “emerging” representation of controls of soil C:N that includes plant-microbe-mineral feedbacks that have been shown to regulate soil C:N. We argue that including representation of these emerging drivers in process-based terrestrial biogeochemistry models, which include biological N fixation, mycorrhizae, priming, root exudation of organic acids, and mineralogy (including soil texture, mineral composition, and aggregation), will improve mechanistic representation of soil C:N and associated processes. Such improvements will produce models that will better simulate a variety of ecological states and predict soil C:N when global changes modify plant-microbe-mineral interactions. Here, we align our empirical understanding of controls of soil C:N with those controls represented in models, identifying contexts where emerging drivers might be particularly important to represent (e.g., priming and root exudation in nutrient-limited conditions) and areas of future work. Additionally, we show that implementing emerging drivers of soil C:N results in different simulated outcomes at steady state and in response to elevated atmospheric CO2. Our review and preliminary simulations support the need to incorporate emerging drivers of soil C:N into process-based terrestrial biogeochemistry models, allowing for both theoretical exploration of mechanisms and potentially more accurate predictions of land biogeochemical responses to global change.